EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTRG00000003697 (Gene tree)
Gene ID
-
Gene Symbol
PATL1
Alias
-
Full Name
PAT1 homolog 1%2C processing body mRNA decay factor
Gene Type
protein_coding
Species
Pan_troglodytes
Status
putative
Strand
Minus strand
Length
34799 bases
Position
chr11:59438463-59473261
Accession
10369
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTRP00000064457PAT1PF09770.91.4e-1611
ENSPTRP00000006372PAT1PF09770.92.5e-1511
ENSPTRP00000093449PAT1PF09770.92.8e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTRT00000006907-2163XM_016922378ENSPTRP00000006372720 (aa)-H2Q3R3
ENSPTRT00000104599-2184-ENSPTRP00000064457727 (aa)-A0A2I3RIF4
ENSPTRT00000082081-2127-ENSPTRP00000093449708 (aa)-A0A2I3TW48
Gene Model
Click here to download ENSPTRG00000003697's gene model file
Pathways
Pathway IDPathway NameSource
ptr03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000003697's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTRG00000003697PATL15532.477ENSPTRG00000041536PATL27432.634
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTRG00000003697PATL110090.576ENSG00000166889PATL19990.576Homo_sapiens
ENSPTRG00000003697PATL15532.477ENSG00000229474PATL29932.782Homo_sapiens
ENSPTRG00000003697PATL19538.263ENSAPOG00000021290patl19843.056Acanthochromis_polyacanthus
ENSPTRG00000003697PATL16732.075ENSAPOG00000022988patl27331.569Acanthochromis_polyacanthus
ENSPTRG00000003697PATL110087.712ENSAMEG00000014215PATL19987.974Ailuropoda_melanoleuca
ENSPTRG00000003697PATL15631.469ENSAMEG00000014997PATL27831.702Ailuropoda_melanoleuca
ENSPTRG00000003697PATL19642.542ENSACIG00000005182patl19943.216Amphilophus_citrinellus
ENSPTRG00000003697PATL19337.339ENSAOCG00000021993patl19543.152Amphiprion_ocellaris
ENSPTRG00000003697PATL16531.663ENSAPEG00000011299patl27031.098Amphiprion_percula
ENSPTRG00000003697PATL16265.000ENSAPEG00000021391patl18159.722Amphiprion_percula
ENSPTRG00000003697PATL19263.333ENSATEG00000002230patl18066.667Anabas_testudineus
ENSPTRG00000003697PATL16331.717ENSATEG00000019567patl27032.121Anabas_testudineus
ENSPTRG00000003697PATL18632.067ENSAPLG00000003980PATL29831.507Anas_platyrhynchos
ENSPTRG00000003697PATL17061.413ENSAPLG00000013394PATL19961.931Anas_platyrhynchos
ENSPTRG00000003697PATL19973.622ENSACAG00000006607PATL19973.622Anolis_carolinensis
ENSPTRG00000003697PATL110089.660ENSANAG00000023078PATL19989.660Aotus_nancymaae
ENSPTRG00000003697PATL19166.667ENSACLG00000005144patl18447.573Astatotilapia_calliptera
ENSPTRG00000003697PATL19940.100ENSAMXG00000010731patl19943.522Astyanax_mexicanus
ENSPTRG00000003697PATL17432.461ENSAMXG00000020293patl26732.470Astyanax_mexicanus
ENSPTRG00000003697PATL110087.320ENSBTAG00000005913PATL19987.320Bos_taurus
ENSPTRG00000003697PATL15333.981ENSCJAG00000002379PATL27233.981Callithrix_jacchus
ENSPTRG00000003697PATL110089.791ENSCJAG00000016192PATL19989.791Callithrix_jacchus
ENSPTRG00000003697PATL16430.645ENSCAFG00000013629PATL28730.242Canis_familiaris
ENSPTRG00000003697PATL110088.497ENSCAFG00000007581PATL19988.758Canis_familiaris
ENSPTRG00000003697PATL110088.497ENSCAFG00020001648PATL110088.758Canis_lupus_dingo
ENSPTRG00000003697PATL16430.645ENSCAFG00020022169PATL28630.972Canis_lupus_dingo
ENSPTRG00000003697PATL110086.405ENSCHIG00000025913PATL19986.405Capra_hircus
ENSPTRG00000003697PATL15435.561ENSCHIG00000026665PATL27435.084Capra_hircus
ENSPTRG00000003697PATL110088.743ENSTSYG00000012748PATL19588.743Carlito_syrichta
ENSPTRG00000003697PATL110083.420ENSCAPG00000013668PATL19983.420Cavia_aperea
ENSPTRG00000003697PATL110082.781ENSCPOG00000006827PATL19982.398Cavia_porcellus
ENSPTRG00000003697PATL110089.921ENSCCAG00000023759PATL19989.921Cebus_capucinus
ENSPTRG00000003697PATL110089.921ENSCATG00000009629PATL19989.921Cercocebus_atys
ENSPTRG00000003697PATL15031.714ENSCLAG00000014407PATL27332.481Chinchilla_lanigera
ENSPTRG00000003697PATL19983.663ENSCLAG00000003427PATL19983.663Chinchilla_lanigera
ENSPTRG00000003697PATL19088.824ENSCSAG00000006095PATL19988.824Chlorocebus_sabaeus
ENSPTRG00000003697PATL16996.970ENSCHOG00000001611PATL18496.970Choloepus_hoffmanni
ENSPTRG00000003697PATL15336.408ENSCPBG00000006150PATL25935.835Chrysemys_picta_bellii
ENSPTRG00000003697PATL19990.039ENSCANG00000039197PATL19990.039Colobus_angolensis_palliatus
ENSPTRG00000003697PATL15533.100ENSCANG00000013856PATL27433.566Colobus_angolensis_palliatus
ENSPTRG00000003697PATL110087.958ENSCGRG00001024927Patl19987.958Cricetulus_griseus_chok1gshd
ENSPTRG00000003697PATL110087.451ENSCGRG00000000461Patl19987.879Cricetulus_griseus_crigri
ENSPTRG00000003697PATL19265.000ENSCSEG00000008261patl18253.488Cynoglossus_semilaevis
ENSPTRG00000003697PATL16030.736ENSCSEG00000009438patl26230.736Cynoglossus_semilaevis
ENSPTRG00000003697PATL15432.266ENSCVAG00000016203patl26331.785Cyprinodon_variegatus
ENSPTRG00000003697PATL110041.720ENSCVAG00000006664patl110043.223Cyprinodon_variegatus
ENSPTRG00000003697PATL110043.980ENSDARG00000017423patl110043.926Danio_rerio
ENSPTRG00000003697PATL18630.215ENSDARG00000089567patl26432.465Danio_rerio
ENSPTRG00000003697PATL19981.184ENSDNOG00000038865PATL19783.799Dasypus_novemcinctus
ENSPTRG00000003697PATL15032.737ENSDORG00000026649Patl27231.714Dipodomys_ordii
ENSPTRG00000003697PATL110087.958ENSDORG00000000237Patl19987.958Dipodomys_ordii
ENSPTRG00000003697PATL110087.859ENSEASG00005007963PATL19987.859Equus_asinus_asinus
ENSPTRG00000003697PATL110087.859ENSECAG00000011411PATL19987.859Equus_caballus
ENSPTRG00000003697PATL16731.346ENSELUG00000023244patl25931.453Esox_lucius
ENSPTRG00000003697PATL18961.017ENSELUG00000024249patl18068.333Esox_lucius
ENSPTRG00000003697PATL110088.089ENSFCAG00000015573PATL19988.351Felis_catus
ENSPTRG00000003697PATL19973.850ENSFALG00000012150PATL19972.763Ficedula_albicollis
ENSPTRG00000003697PATL19730.968ENSFALG00000009768PATL29831.484Ficedula_albicollis
ENSPTRG00000003697PATL19985.033ENSFDAG00000016128PATL19985.033Fukomys_damarensis
ENSPTRG00000003697PATL15231.235ENSFDAG00000012242PATL27632.203Fukomys_damarensis
ENSPTRG00000003697PATL19266.667ENSFHEG00000017790patl18358.333Fundulus_heteroclitus
ENSPTRG00000003697PATL15331.175ENSGMOG00000005666patl29930.144Gadus_morhua
ENSPTRG00000003697PATL110072.668ENSGALG00000042641PATL110073.062Gallus_gallus
ENSPTRG00000003697PATL19458.904ENSGAFG00000006508patl18458.904Gambusia_affinis
ENSPTRG00000003697PATL110044.141ENSGACG00000016448patl19945.514Gasterosteus_aculeatus
ENSPTRG00000003697PATL110076.923ENSGAGG00000004461PATL19977.168Gopherus_agassizii
ENSPTRG00000003697PATL15532.710ENSGGOG00000025923PATL27432.867Gorilla_gorilla
ENSPTRG00000003697PATL110090.576ENSGGOG00000004335PATL110089.946Gorilla_gorilla
ENSPTRG00000003697PATL16131.983ENSHBUG00000005929patl26732.258Haplochromis_burtoni
ENSPTRG00000003697PATL19166.667ENSHBUG00000005365patl18447.573Haplochromis_burtoni
ENSPTRG00000003697PATL110085.340ENSHGLG00000018173PATL19985.340Heterocephalus_glaber_female
ENSPTRG00000003697PATL19983.794ENSHGLG00100003453PATL19983.794Heterocephalus_glaber_male
ENSPTRG00000003697PATL19265.000ENSHCOG00000001898patl18254.430Hippocampus_comes
ENSPTRG00000003697PATL19888.564ENSSTOG00000013764PATL19888.564Ictidomys_tridecemlineatus
ENSPTRG00000003697PATL15333.898ENSSTOG00000033848PATL27232.289Ictidomys_tridecemlineatus
ENSPTRG00000003697PATL19987.467ENSJJAG00000010135Patl19987.467Jaculus_jaculus
ENSPTRG00000003697PATL19261.667ENSKMAG00000020848patl18155.556Kryptolebias_marmoratus
ENSPTRG00000003697PATL19268.333ENSLBEG00000023617patl18158.025Labrus_bergylta
ENSPTRG00000003697PATL16032.613ENSLBEG00000022344patl25832.181Labrus_bergylta
ENSPTRG00000003697PATL19854.873ENSLACG00000004640PATL19954.594Latimeria_chalumnae
ENSPTRG00000003697PATL110044.349ENSLOCG00000000717patl19944.717Lepisosteus_oculatus
ENSPTRG00000003697PATL110087.712ENSLAFG00000015161PATL19987.712Loxodonta_africana
ENSPTRG00000003697PATL15035.038ENSLAFG00000031124PATL27134.271Loxodonta_africana
ENSPTRG00000003697PATL110089.921ENSMFAG00000040851PATL19989.921Macaca_fascicularis
ENSPTRG00000003697PATL110089.921ENSMMUG00000017287PATL19989.921Macaca_mulatta
ENSPTRG00000003697PATL110089.921ENSMNEG00000038692PATL19989.921Macaca_nemestrina
ENSPTRG00000003697PATL110089.791ENSMLEG00000030044PATL19989.791Mandrillus_leucophaeus
ENSPTRG00000003697PATL16030.786ENSMAMG00000013327patl26631.169Mastacembelus_armatus
ENSPTRG00000003697PATL19261.290ENSMAMG00000003950patl19843.291Mastacembelus_armatus
ENSPTRG00000003697PATL19166.667ENSMZEG00005013404patl18447.573Maylandia_zebra
ENSPTRG00000003697PATL18631.442ENSMGAG00000001309PATL29831.493Meleagris_gallopavo
ENSPTRG00000003697PATL19371.469ENSMGAG00000003406PATL19971.469Meleagris_gallopavo
ENSPTRG00000003697PATL19482.000ENSMAUG00000012059Patl19681.714Mesocricetus_auratus
ENSPTRG00000003697PATL110085.229ENSMICG00000004172PATL19888.449Microcebus_murinus
ENSPTRG00000003697PATL15232.338ENSMOCG00000015367Patl27232.668Microtus_ochrogaster
ENSPTRG00000003697PATL110087.696ENSMOCG00000010087Patl19987.696Microtus_ochrogaster
ENSPTRG00000003697PATL110042.388ENSMMOG00000013711patl110041.897Mola_mola
ENSPTRG00000003697PATL15433.890ENSMODG00000017690PATL27132.944Monodelphis_domestica
ENSPTRG00000003697PATL110080.809ENSMODG00000020201PATL19980.809Monodelphis_domestica
ENSPTRG00000003697PATL15331.477ENSMALG00000008131patl25630.087Monopterus_albus
ENSPTRG00000003697PATL19338.533ENSMALG00000018706patl19940.263Monopterus_albus
ENSPTRG00000003697PATL110087.827MGP_CAROLIEiJ_G0022739Patl19987.827Mus_caroli
ENSPTRG00000003697PATL110087.958ENSMUSG00000046139Patl19987.958Mus_musculus
ENSPTRG00000003697PATL110087.696MGP_PahariEiJ_G0014233Patl19987.696Mus_pahari
ENSPTRG00000003697PATL110088.089MGP_SPRETEiJ_G0023652Patl19988.089Mus_spretus
ENSPTRG00000003697PATL110088.627ENSMPUG00000014607PATL19988.889Mustela_putorius_furo
ENSPTRG00000003697PATL110085.621ENSMLUG00000011169PATL110084.697Myotis_lucifugus
ENSPTRG00000003697PATL110088.542ENSNGAG00000003682Patl19988.542Nannospalax_galili
ENSPTRG00000003697PATL16244.000ENSNBRG00000015372patl19332.486Neolamprologus_brichardi
ENSPTRG00000003697PATL15432.775ENSNBRG00000011745patl26432.258Neolamprologus_brichardi
ENSPTRG00000003697PATL15533.178ENSNLEG00000005673PATL27533.333Nomascus_leucogenys
ENSPTRG00000003697PATL19989.544ENSNLEG00000013081PATL110089.544Nomascus_leucogenys
ENSPTRG00000003697PATL16490.968ENSMEUG00000009391PATL17490.968Notamacropus_eugenii
ENSPTRG00000003697PATL16996.000ENSOPRG00000007963PATL17996.000Ochotona_princeps
ENSPTRG00000003697PATL17489.796ENSODEG00000001792PATL19590.040Octodon_degus
ENSPTRG00000003697PATL19166.667ENSONIG00000004170patl110045.910Oreochromis_niloticus
ENSPTRG00000003697PATL16032.833ENSONIG00000011519patl26031.702Oreochromis_niloticus
ENSPTRG00000003697PATL15034.901ENSOANG00000001538-8435.452Ornithorhynchus_anatinus
ENSPTRG00000003697PATL15177.330ENSOANG00000011117-9677.551Ornithorhynchus_anatinus
ENSPTRG00000003697PATL15131.250ENSOCUG00000006339PATL27431.000Oryctolagus_cuniculus
ENSPTRG00000003697PATL110088.874ENSOCUG00000002156PATL19988.874Oryctolagus_cuniculus
ENSPTRG00000003697PATL16330.223ENSORLG00000005780patl26330.943Oryzias_latipes
ENSPTRG00000003697PATL16330.629ENSORLG00020016506patl26131.352Oryzias_latipes_hni
ENSPTRG00000003697PATL19065.385ENSORLG00015022240patl18365.385Oryzias_latipes_hsok
ENSPTRG00000003697PATL16330.426ENSORLG00015014500patl26331.148Oryzias_latipes_hsok
ENSPTRG00000003697PATL16931.262ENSOMEG00000021628patl27030.435Oryzias_melastigma
ENSPTRG00000003697PATL110089.398ENSOGAG00000004351PATL19989.398Otolemur_garnettii
ENSPTRG00000003697PATL15431.504ENSOGAG00000004709PATL27831.195Otolemur_garnettii
ENSPTRG00000003697PATL19986.842ENSOARG00000012005PATL19586.842Ovis_aries
ENSPTRG00000003697PATL15234.568ENSOARG00000003762PATL27234.568Ovis_aries
ENSPTRG00000003697PATL110090.969ENSPPAG00000034275PATL110090.426Pan_paniscus
ENSPTRG00000003697PATL15532.867ENSPPAG00000007221PATL27432.867Pan_paniscus
ENSPTRG00000003697PATL19987.879ENSPPRG00000020639PATL19988.142Panthera_pardus
ENSPTRG00000003697PATL110087.958ENSPTIG00000019298PATL19988.220Panthera_tigris_altaica
ENSPTRG00000003697PATL110089.921ENSPANG00000035620PATL19989.921Papio_anubis
ENSPTRG00000003697PATL110043.267ENSPKIG00000016224patl19943.866Paramormyrops_kingsleyae
ENSPTRG00000003697PATL15436.207ENSPSIG00000017690PATL29534.925Pelodiscus_sinensis
ENSPTRG00000003697PATL110076.402ENSPSIG00000016206PATL19576.402Pelodiscus_sinensis
ENSPTRG00000003697PATL110042.034ENSPMGG00000002644patl19942.312Periophthalmus_magnuspinnatus
ENSPTRG00000003697PATL15830.717ENSPMGG00000014550patl26631.011Periophthalmus_magnuspinnatus
ENSPTRG00000003697PATL15032.737ENSPEMG00000016509Patl27032.992Peromyscus_maniculatus_bairdii
ENSPTRG00000003697PATL110087.696ENSPEMG00000014215Patl19987.696Peromyscus_maniculatus_bairdii
ENSPTRG00000003697PATL15232.346ENSPCIG00000018256PATL27633.168Phascolarctos_cinereus
ENSPTRG00000003697PATL110081.070ENSPCIG00000010852PATL19981.070Phascolarctos_cinereus
ENSPTRG00000003697PATL110039.354ENSPFOG00000007768patl19944.039Poecilia_formosa
ENSPTRG00000003697PATL18342.681ENSPLAG00000018465patl17546.749Poecilia_latipinna
ENSPTRG00000003697PATL19148.449ENSPMEG00000006555patl17546.749Poecilia_mexicana
ENSPTRG00000003697PATL18842.384ENSPREG00000003874patl18845.423Poecilia_reticulata
ENSPTRG00000003697PATL110090.445ENSPPYG00000003230PATL19990.445Pongo_abelii
ENSPTRG00000003697PATL15732.192ENSPCOG00000000295PATL29933.884Propithecus_coquereli
ENSPTRG00000003697PATL110089.136ENSPCOG00000020770PATL19989.136Propithecus_coquereli
ENSPTRG00000003697PATL18481.917ENSPVAG00000015239PATL19982.380Pteropus_vampyrus
ENSPTRG00000003697PATL17951.701ENSPNYG00000018936patl19151.701Pundamilia_nyererei
ENSPTRG00000003697PATL16131.770ENSPNYG00000017381patl26732.043Pundamilia_nyererei
ENSPTRG00000003697PATL16631.311ENSPNAG00000002315patl27031.456Pygocentrus_nattereri
ENSPTRG00000003697PATL19259.016ENSPNAG00000017907patl18462.295Pygocentrus_nattereri
ENSPTRG00000003697PATL110087.696ENSRNOG00000021052Patl19987.696Rattus_norvegicus
ENSPTRG00000003697PATL110083.419ENSRBIG00000032263PATL19983.611Rhinopithecus_bieti
ENSPTRG00000003697PATL110090.052ENSRROG00000032861PATL19990.052Rhinopithecus_roxellana
ENSPTRG00000003697PATL110089.921ENSSBOG00000025195PATL110089.229Saimiri_boliviensis_boliviensis
ENSPTRG00000003697PATL110081.510ENSSHAG00000004309PATL19981.510Sarcophilus_harrisii
ENSPTRG00000003697PATL110043.618ENSSFOG00015009614patl19942.683Scleropages_formosus
ENSPTRG00000003697PATL18730.376ENSSFOG00015000720patl26032.548Scleropages_formosus
ENSPTRG00000003697PATL16332.106ENSSMAG00000017262patl27331.557Scophthalmus_maximus
ENSPTRG00000003697PATL19554.321ENSSMAG00000009482patl18154.321Scophthalmus_maximus
ENSPTRG00000003697PATL19268.333ENSSDUG00000005362patl17959.722Seriola_dumerili
ENSPTRG00000003697PATL16033.262ENSSDUG00000022927patl26032.272Seriola_dumerili
ENSPTRG00000003697PATL16732.115ENSSLDG00000017922patl26433.117Seriola_lalandi_dorsalis
ENSPTRG00000003697PATL19266.667ENSSLDG00000019146patl17958.333Seriola_lalandi_dorsalis
ENSPTRG00000003697PATL17897.619ENSSARG00000009600PATL17997.619Sorex_araneus
ENSPTRG00000003697PATL15033.333ENSSARG00000009047PATL27632.570Sorex_araneus
ENSPTRG00000003697PATL110075.330ENSSPUG00000009453PATL19975.330Sphenodon_punctatus
ENSPTRG00000003697PATL19538.065ENSSPAG00000003187patl19843.392Stegastes_partitus
ENSPTRG00000003697PATL16030.736ENSSPAG00000004784patl26831.020Stegastes_partitus
ENSPTRG00000003697PATL110088.366ENSSSCG00000013124PATL19988.366Sus_scrofa
ENSPTRG00000003697PATL15234.500ENSTGUG00000004619-9836.658Taeniopygia_guttata
ENSPTRG00000003697PATL19973.657ENSTGUG00000006222PATL19972.572Taeniopygia_guttata
ENSPTRG00000003697PATL19453.165ENSTRUG00000000709patl19941.863Takifugu_rubripes
ENSPTRG00000003697PATL16830.171ENSTRUG00000005647patl27030.171Takifugu_rubripes
ENSPTRG00000003697PATL19289.260ENSTBEG00000000796PATL18988.915Tupaia_belangeri
ENSPTRG00000003697PATL17197.419ENSTTRG00000009389PATL18397.419Tursiops_truncatus
ENSPTRG00000003697PATL19988.158ENSUMAG00000018634PATL19988.421Ursus_maritimus
ENSPTRG00000003697PATL16490.683ENSVPAG00000009224PATL17190.683Vicugna_pacos
ENSPTRG00000003697PATL19988.305ENSVVUG00000016668PATL19987.536Vulpes_vulpes
ENSPTRG00000003697PATL16430.847ENSVVUG00000011576PATL28731.174Vulpes_vulpes
ENSPTRG00000003697PATL17532.394ENSXETG00000014167patl27632.377Xenopus_tropicalis
ENSPTRG00000003697PATL17961.404ENSXCOG00000010808patl19861.404Xiphophorus_couchianus
ENSPTRG00000003697PATL19265.000ENSXMAG00000013834patl18456.164Xiphophorus_maculatus

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