EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000003912 (Gene tree)
Gene ID: 451343
Gene Symbol: SF3B2
Alias: -
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 17279 bases
Position: chr11:66146592-66163870
Accession: 3052
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000093688	DUF382	PF04037.13	2e-59	1	1
ENSPTRP00000006745	DUF382	PF04037.13	2e-59	1	1
ENSPTRP00000089573	DUF382	PF04037.13	2e-59	1	1
ENSPTRP00000069263	DUF382	PF04037.13	2e-59	1	1
ENSPTRP00000089573	SAP	PF02037.27	3.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000007310	-	2676	-	ENSPTRP00000006745	891 (aa)	-	H2Q457
ENSPTRT00000102276	-	2649	-	ENSPTRP00000093688	882 (aa)	-	A0A2I3TWY2
ENSPTRT00000082091	-	3603	XM_009423500	ENSPTRP00000089573	895 (aa)	XP_009421775	A0A2I3TKX5
ENSPTRT00000086783	-	2697	-	ENSPTRP00000069263	898 (aa)	-	A0A2I3RX16

Gene Model

Click here to download ENSPTRG00000003912's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000003912's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000003912	SF3B2	100	100.000	ENSG00000087365	SF3B2	100	100.000	Homo_sapiens
ENSPTRG00000003912	SF3B2	95	69.884	ENSAPOG00000001974	sf3b2	82	74.394	Acanthochromis_polyacanthus
ENSPTRG00000003912	SF3B2	100	98.000	ENSAMEG00000017206	SF3B2	100	98.000	Ailuropoda_melanoleuca
ENSPTRG00000003912	SF3B2	97	68.229	ENSACIG00000000624	sf3b2	87	74.572	Amphilophus_citrinellus
ENSPTRG00000003912	SF3B2	97	70.635	ENSAOCG00000009207	sf3b2	86	75.065	Amphiprion_ocellaris
ENSPTRG00000003912	SF3B2	97	70.225	ENSAPEG00000002762	sf3b2	87	73.205	Amphiprion_percula
ENSPTRG00000003912	SF3B2	100	65.642	ENSACAG00000008615	SF3B2	100	66.040	Anolis_carolinensis
ENSPTRG00000003912	SF3B2	100	99.107	ENSANAG00000029120	SF3B2	100	99.107	Aotus_nancymaae
ENSPTRG00000003912	SF3B2	88	71.950	ENSACLG00000014771	sf3b2	97	68.131	Astatotilapia_calliptera
ENSPTRG00000003912	SF3B2	85	71.279	ENSAMXG00000007929	sf3b2	86	77.237	Astyanax_mexicanus
ENSPTRG00000003912	SF3B2	100	97.108	ENSBTAG00000002778	SF3B2	100	97.108	Bos_taurus
ENSPTRG00000003912	SF3B2	60	50.532	WBGene00021004	sftb-2	89	51.825	Caenorhabditis_elegans
ENSPTRG00000003912	SF3B2	100	99.330	ENSCJAG00000001656	SF3B2	100	99.330	Callithrix_jacchus
ENSPTRG00000003912	SF3B2	100	98.107	ENSCAFG00000013033	SF3B2	100	98.107	Canis_familiaris
ENSPTRG00000003912	SF3B2	100	98.107	ENSCAFG00020015382	SF3B2	100	98.107	Canis_lupus_dingo
ENSPTRG00000003912	SF3B2	100	97.327	ENSCHIG00000011211	SF3B2	100	97.327	Capra_hircus
ENSPTRG00000003912	SF3B2	100	98.883	ENSTSYG00000000959	SF3B2	100	98.883	Carlito_syrichta
ENSPTRG00000003912	SF3B2	61	94.000	ENSCAPG00000006065	SF3B2	93	100.000	Cavia_aperea
ENSPTRG00000003912	SF3B2	91	95.080	ENSCPOG00000008294	SF3B2	100	95.080	Cavia_porcellus
ENSPTRG00000003912	SF3B2	100	99.330	ENSCCAG00000035256	SF3B2	100	99.330	Cebus_capucinus
ENSPTRG00000003912	SF3B2	100	99.888	ENSCATG00000042240	SF3B2	100	99.888	Cercocebus_atys
ENSPTRG00000003912	SF3B2	100	96.201	ENSCLAG00000016852	SF3B2	100	96.201	Chinchilla_lanigera
ENSPTRG00000003912	SF3B2	100	99.888	ENSCSAG00000008121	SF3B2	100	99.888	Chlorocebus_sabaeus
ENSPTRG00000003912	SF3B2	91	99.485	ENSCHOG00000001476	SF3B2	92	91.237	Choloepus_hoffmanni
ENSPTRG00000003912	SF3B2	85	81.641	ENSCPBG00000022465	SF3B2	87	88.401	Chrysemys_picta_bellii
ENSPTRG00000003912	SF3B2	73	60.429	ENSCING00000005665	-	99	60.063	Ciona_intestinalis
ENSPTRG00000003912	SF3B2	71	60.440	ENSCSAVG00000002029	-	99	59.779	Ciona_savignyi
ENSPTRG00000003912	SF3B2	100	99.888	ENSCANG00000039680	SF3B2	100	99.888	Colobus_angolensis_palliatus
ENSPTRG00000003912	SF3B2	100	96.089	ENSCGRG00001015741	Sf3b2	100	96.089	Cricetulus_griseus_chok1gshd
ENSPTRG00000003912	SF3B2	100	96.089	ENSCGRG00000018110	Sf3b2	100	96.089	Cricetulus_griseus_crigri
ENSPTRG00000003912	SF3B2	81	71.031	ENSCSEG00000000230	sf3b2	78	77.129	Cynoglossus_semilaevis
ENSPTRG00000003912	SF3B2	97	68.171	ENSCVAG00000003357	sf3b2	85	74.934	Cyprinodon_variegatus
ENSPTRG00000003912	SF3B2	82	71.716	ENSDARG00000018049	sf3b2	86	74.145	Danio_rerio
ENSPTRG00000003912	SF3B2	100	96.214	ENSDNOG00000009484	SF3B2	100	96.504	Dasypus_novemcinctus
ENSPTRG00000003912	SF3B2	100	95.871	ENSDORG00000002495	Sf3b2	100	95.871	Dipodomys_ordii
ENSPTRG00000003912	SF3B2	84	88.889	ENSETEG00000020284	SF3B2	85	88.759	Echinops_telfairi
ENSPTRG00000003912	SF3B2	98	58.900	ENSEBUG00000013703	sf3b2	99	60.174	Eptatretus_burgeri
ENSPTRG00000003912	SF3B2	100	97.998	ENSEASG00005004508	SF3B2	100	97.998	Equus_asinus_asinus
ENSPTRG00000003912	SF3B2	100	97.998	ENSECAG00000024461	SF3B2	100	97.998	Equus_caballus
ENSPTRG00000003912	SF3B2	61	100.000	ENSEEUG00000014278	-	60	100.000	Erinaceus_europaeus
ENSPTRG00000003912	SF3B2	97	66.848	ENSELUG00000005586	sf3b2	86	71.499	Esox_lucius
ENSPTRG00000003912	SF3B2	100	98.218	ENSFCAG00000013289	SF3B2	100	98.218	Felis_catus
ENSPTRG00000003912	SF3B2	79	69.986	ENSFALG00000014653	SF3B2	98	69.275	Ficedula_albicollis
ENSPTRG00000003912	SF3B2	100	97.556	ENSFDAG00000019806	SF3B2	100	97.556	Fukomys_damarensis
ENSPTRG00000003912	SF3B2	84	71.673	ENSFHEG00000020968	sf3b2	86	72.000	Fundulus_heteroclitus
ENSPTRG00000003912	SF3B2	73	78.049	ENSGMOG00000012131	sf3b2	96	80.975	Gadus_morhua
ENSPTRG00000003912	SF3B2	97	67.991	ENSGAFG00000001675	sf3b2	86	73.386	Gambusia_affinis
ENSPTRG00000003912	SF3B2	73	79.231	ENSGACG00000019012	sf3b2	96	80.159	Gasterosteus_aculeatus
ENSPTRG00000003912	SF3B2	100	77.137	ENSGAGG00000023916	SF3B2	86	85.314	Gopherus_agassizii
ENSPTRG00000003912	SF3B2	100	100.000	ENSGGOG00000028448	SF3B2	100	100.000	Gorilla_gorilla
ENSPTRG00000003912	SF3B2	88	72.075	ENSHBUG00000017349	sf3b2	97	68.131	Haplochromis_burtoni
ENSPTRG00000003912	SF3B2	100	96.089	ENSHGLG00000010807	SF3B2	100	96.089	Heterocephalus_glaber_female
ENSPTRG00000003912	SF3B2	100	97.989	ENSHGLG00100006361	SF3B2	100	97.989	Heterocephalus_glaber_male
ENSPTRG00000003912	SF3B2	97	65.795	ENSHCOG00000016203	sf3b2	97	64.779	Hippocampus_comes
ENSPTRG00000003912	SF3B2	97	65.295	ENSIPUG00000009383	sf3b2	85	71.748	Ictalurus_punctatus
ENSPTRG00000003912	SF3B2	100	98.436	ENSSTOG00000028892	SF3B2	100	98.436	Ictidomys_tridecemlineatus
ENSPTRG00000003912	SF3B2	100	96.102	ENSJJAG00000018193	Sf3b2	100	96.102	Jaculus_jaculus
ENSPTRG00000003912	SF3B2	60	87.970	ENSKMAG00000020181	sf3b2	84	74.079	Kryptolebias_marmoratus
ENSPTRG00000003912	SF3B2	97	68.652	ENSLBEG00000027739	sf3b2	88	78.268	Labrus_bergylta
ENSPTRG00000003912	SF3B2	79	81.250	ENSLACG00000010429	SF3B2	93	74.392	Latimeria_chalumnae
ENSPTRG00000003912	SF3B2	100	95.768	ENSLAFG00000002128	SF3B2	100	95.768	Loxodonta_africana
ENSPTRG00000003912	SF3B2	100	99.777	ENSMFAG00000003064	SF3B2	100	99.777	Macaca_fascicularis
ENSPTRG00000003912	SF3B2	100	95.419	ENSMMUG00000011743	SF3B2	100	95.419	Macaca_mulatta
ENSPTRG00000003912	SF3B2	100	99.777	ENSMNEG00000034437	SF3B2	100	99.777	Macaca_nemestrina
ENSPTRG00000003912	SF3B2	100	99.665	ENSMLEG00000029373	SF3B2	100	99.665	Mandrillus_leucophaeus
ENSPTRG00000003912	SF3B2	85	74.871	ENSMAMG00000014103	sf3b2	86	75.000	Mastacembelus_armatus
ENSPTRG00000003912	SF3B2	86	73.032	ENSMZEG00005020789	sf3b2	86	74.708	Maylandia_zebra
ENSPTRG00000003912	SF3B2	65	98.333	ENSMAUG00000017040	Sf3b2	100	98.333	Mesocricetus_auratus
ENSPTRG00000003912	SF3B2	100	98.547	ENSMICG00000008565	-	100	98.547	Microcebus_murinus
ENSPTRG00000003912	SF3B2	100	94.760	ENSMICG00000016942	-	97	94.760	Microcebus_murinus
ENSPTRG00000003912	SF3B2	100	95.978	ENSMOCG00000003136	Sf3b2	100	95.978	Microtus_ochrogaster
ENSPTRG00000003912	SF3B2	72	88.346	ENSMODG00000025020	-	99	87.402	Monodelphis_domestica
ENSPTRG00000003912	SF3B2	86	90.352	ENSMODG00000008490	-	92	93.209	Monodelphis_domestica
ENSPTRG00000003912	SF3B2	86	70.833	ENSMALG00000015137	sf3b2	84	73.699	Monopterus_albus
ENSPTRG00000003912	SF3B2	100	95.084	MGP_CAROLIEiJ_G0022539	Sf3b2	100	95.084	Mus_caroli
ENSPTRG00000003912	SF3B2	100	95.866	ENSMUSG00000024853	Sf3b2	100	95.866	Mus_musculus
ENSPTRG00000003912	SF3B2	100	95.866	MGP_PahariEiJ_G0014036	Sf3b2	100	95.866	Mus_pahari
ENSPTRG00000003912	SF3B2	100	95.754	MGP_SPRETEiJ_G0023453	Sf3b2	100	95.754	Mus_spretus
ENSPTRG00000003912	SF3B2	100	97.996	ENSMPUG00000011349	SF3B2	100	97.996	Mustela_putorius_furo
ENSPTRG00000003912	SF3B2	100	97.108	ENSMLUG00000011136	SF3B2	100	97.108	Myotis_lucifugus
ENSPTRG00000003912	SF3B2	100	96.089	ENSNGAG00000012103	Sf3b2	100	96.089	Nannospalax_galili
ENSPTRG00000003912	SF3B2	100	95.667	ENSNLEG00000006007	SF3B2	100	95.667	Nomascus_leucogenys
ENSPTRG00000003912	SF3B2	85	93.466	ENSMEUG00000000019	SF3B2	80	93.466	Notamacropus_eugenii
ENSPTRG00000003912	SF3B2	100	92.402	ENSODEG00000017764	SF3B2	100	92.402	Octodon_degus
ENSPTRG00000003912	SF3B2	97	67.640	ENSONIG00000013068	sf3b2	87	75.427	Oreochromis_niloticus
ENSPTRG00000003912	SF3B2	88	79.899	ENSOANG00000012482	SF3B2	97	81.192	Ornithorhynchus_anatinus
ENSPTRG00000003912	SF3B2	63	63.978	ENSOCUG00000024154	-	95	67.383	Oryctolagus_cuniculus
ENSPTRG00000003912	SF3B2	100	93.073	ENSOCUG00000015722	-	100	93.073	Oryctolagus_cuniculus
ENSPTRG00000003912	SF3B2	97	67.571	ENSORLG00000008235	sf3b2	85	74.607	Oryzias_latipes
ENSPTRG00000003912	SF3B2	97	67.571	ENSORLG00020005357	sf3b2	88	74.607	Oryzias_latipes_hni
ENSPTRG00000003912	SF3B2	97	67.684	ENSORLG00015022454	sf3b2	82	78.323	Oryzias_latipes_hsok
ENSPTRG00000003912	SF3B2	100	92.402	ENSOGAG00000005799	SF3B2	100	92.961	Otolemur_garnettii
ENSPTRG00000003912	SF3B2	100	92.231	ENSOARG00000002125	SF3B2	100	98.103	Ovis_aries
ENSPTRG00000003912	SF3B2	100	100.000	ENSPPAG00000007359	SF3B2	100	100.000	Pan_paniscus
ENSPTRG00000003912	SF3B2	100	98.218	ENSPPRG00000013334	SF3B2	100	98.218	Panthera_pardus
ENSPTRG00000003912	SF3B2	100	98.107	ENSPTIG00000015022	SF3B2	100	98.107	Panthera_tigris_altaica
ENSPTRG00000003912	SF3B2	100	99.888	ENSPANG00000008593	SF3B2	100	99.888	Papio_anubis
ENSPTRG00000003912	SF3B2	97	67.893	ENSPKIG00000016576	sf3b2	86	81.359	Paramormyrops_kingsleyae
ENSPTRG00000003912	SF3B2	93	80.737	ENSPSIG00000003158	SF3B2	100	88.493	Pelodiscus_sinensis
ENSPTRG00000003912	SF3B2	85	67.937	ENSPMGG00000000819	sf3b2	86	67.759	Periophthalmus_magnuspinnatus
ENSPTRG00000003912	SF3B2	93	81.851	ENSPEMG00000015451	-	100	82.460	Peromyscus_maniculatus_bairdii
ENSPTRG00000003912	SF3B2	100	96.201	ENSPEMG00000015437	Sf3b2	100	96.201	Peromyscus_maniculatus_bairdii
ENSPTRG00000003912	SF3B2	86	89.687	ENSPCIG00000008381	SF3B2	100	87.061	Phascolarctos_cinereus
ENSPTRG00000003912	SF3B2	97	68.259	ENSPFOG00000002552	sf3b2	86	73.123	Poecilia_formosa
ENSPTRG00000003912	SF3B2	97	68.259	ENSPLAG00000001471	sf3b2	86	73.254	Poecilia_latipinna
ENSPTRG00000003912	SF3B2	97	67.084	ENSPMEG00000013180	sf3b2	86	74.440	Poecilia_mexicana
ENSPTRG00000003912	SF3B2	84	72.523	ENSPREG00000002665	sf3b2	86	74.113	Poecilia_reticulata
ENSPTRG00000003912	SF3B2	75	98.212	ENSPPYG00000003034	-	99	98.212	Pongo_abelii
ENSPTRG00000003912	SF3B2	100	97.216	ENSPCAG00000005129	SF3B2	100	97.216	Procavia_capensis
ENSPTRG00000003912	SF3B2	100	99.106	ENSPCOG00000025375	SF3B2	100	99.106	Propithecus_coquereli
ENSPTRG00000003912	SF3B2	60	99.561	ENSPVAG00000005466	-	88	99.561	Pteropus_vampyrus
ENSPTRG00000003912	SF3B2	55	99.299	ENSPVAG00000016975	-	55	99.299	Pteropus_vampyrus
ENSPTRG00000003912	SF3B2	81	73.750	ENSPNYG00000023594	sf3b2	92	74.105	Pundamilia_nyererei
ENSPTRG00000003912	SF3B2	86	71.808	ENSPNAG00000001891	sf3b2	86	73.214	Pygocentrus_nattereri
ENSPTRG00000003912	SF3B2	100	96.089	ENSRNOG00000020412	Sf3b2	100	96.089	Rattus_norvegicus
ENSPTRG00000003912	SF3B2	100	99.777	ENSRBIG00000034065	SF3B2	100	99.777	Rhinopithecus_bieti
ENSPTRG00000003912	SF3B2	100	99.777	ENSRROG00000034496	SF3B2	100	99.777	Rhinopithecus_roxellana
ENSPTRG00000003912	SF3B2	100	94.923	ENSSBOG00000026337	SF3B2	100	93.709	Saimiri_boliviensis_boliviensis
ENSPTRG00000003912	SF3B2	86	86.162	ENSSHAG00000010933	-	84	86.815	Sarcophilus_harrisii
ENSPTRG00000003912	SF3B2	96	68.614	ENSSHAG00000018043	-	100	68.807	Sarcophilus_harrisii
ENSPTRG00000003912	SF3B2	97	68.293	ENSSFOG00015021125	sf3b2	86	74.708	Scleropages_formosus
ENSPTRG00000003912	SF3B2	60	87.666	ENSSMAG00000004079	sf3b2	88	75.065	Scophthalmus_maximus
ENSPTRG00000003912	SF3B2	60	87.666	ENSSDUG00000008499	sf3b2	85	71.632	Seriola_dumerili
ENSPTRG00000003912	SF3B2	60	88.425	ENSSLDG00000006838	sf3b2	86	75.163	Seriola_lalandi_dorsalis
ENSPTRG00000003912	SF3B2	53	99.206	ENSSARG00000003707	-	53	99.206	Sorex_araneus
ENSPTRG00000003912	SF3B2	100	79.754	ENSSPUG00000009198	SF3B2	85	83.598	Sphenodon_punctatus
ENSPTRG00000003912	SF3B2	97	68.182	ENSSPAG00000004406	sf3b2	86	75.032	Stegastes_partitus
ENSPTRG00000003912	SF3B2	100	97.216	ENSSSCG00000012957	SF3B2	100	97.216	Sus_scrofa
ENSPTRG00000003912	SF3B2	97	56.751	ENSTRUG00000007611	sf3b2	88	71.763	Takifugu_rubripes
ENSPTRG00000003912	SF3B2	87	68.886	ENSTNIG00000007441	sf3b2	85	70.889	Tetraodon_nigroviridis
ENSPTRG00000003912	SF3B2	89	91.860	ENSTBEG00000004258	SF3B2	82	99.286	Tupaia_belangeri
ENSPTRG00000003912	SF3B2	100	97.550	ENSTTRG00000014339	SF3B2	100	97.550	Tursiops_truncatus
ENSPTRG00000003912	SF3B2	100	96.218	ENSUAMG00000020754	SF3B2	99	97.558	Ursus_americanus
ENSPTRG00000003912	SF3B2	100	98.218	ENSUMAG00000010994	SF3B2	100	98.218	Ursus_maritimus
ENSPTRG00000003912	SF3B2	67	99.153	ENSVPAG00000008695	SF3B2	63	99.153	Vicugna_pacos
ENSPTRG00000003912	SF3B2	100	97.996	ENSVVUG00000027029	SF3B2	100	97.996	Vulpes_vulpes
ENSPTRG00000003912	SF3B2	88	70.581	ENSXETG00000008422	sf3b2	87	78.540	Xenopus_tropicalis
ENSPTRG00000003912	SF3B2	71	78.571	ENSXCOG00000008943	sf3b2	84	78.095	Xiphophorus_couchianus
ENSPTRG00000003912	SF3B2	60	87.736	ENSXMAG00000008467	sf3b2	86	72.739	Xiphophorus_maculatus