EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTRG00000004580 (Gene tree)
Gene ID
451788
Gene Symbol
CHD4
Alias
-
Full Name
chromodomain helicase DNA binding protein 4
Gene Type
protein_coding
Species
Pan_troglodytes
Status
putative
Strand
Minus strand
Length
37603 bases
Position
chr12:6877858-6915460
Accession
51251
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTRP00000039322ResIIIPF04851.157.4e-1011
ENSPTRP00000083768ResIIIPF04851.157.4e-1011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTRT00000042594-5679-ENSPTRP000000393221892 (aa)-H2QZP6
ENSPTRT00000106730-6545XM_016922838ENSPTRP000000837681912 (aa)XP_016778327K7B9Z5
Gene Model
Click here to download ENSPTRG00000004580's gene model file
Pathways
Pathway IDPathway NameSource
ptr05165Human papillomavirus infectionKEGG
ptr05203Viral carcinogenesisKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000004580's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTRG00000004580CHD49671.649ENSPTRG00000000075CHD59471.795
ENSPTRG00000004580CHD49670.337ENSPTRG00000008714CHD39568.646
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTRG00000004580CHD410099.948ENSG00000111642CHD4100100.000Homo_sapiens
ENSPTRG00000004580CHD49380.225ENSAPOG00000008935chd4a9978.830Acanthochromis_polyacanthus
ENSPTRG00000004580CHD49370.898ENSAPOG00000020502-9370.859Acanthochromis_polyacanthus
ENSPTRG00000004580CHD410098.902ENSAMEG00000014179-9998.902Ailuropoda_melanoleuca
ENSPTRG00000004580CHD49376.599ENSACIG00000012387-9576.036Amphilophus_citrinellus
ENSPTRG00000004580CHD49678.289ENSACIG00000019310chd4a9092.825Amphilophus_citrinellus
ENSPTRG00000004580CHD49875.153ENSAOCG00000000507-9875.892Amphiprion_ocellaris
ENSPTRG00000004580CHD49280.361ENSAOCG00000016412-9880.960Amphiprion_ocellaris
ENSPTRG00000004580CHD49675.067ENSAPEG00000005957-9874.812Amphiprion_percula
ENSPTRG00000004580CHD48279.706ENSAPEG00000001757chd4a9977.413Amphiprion_percula
ENSPTRG00000004580CHD49371.059ENSAPEG00000020306-8983.019Amphiprion_percula
ENSPTRG00000004580CHD49372.157ENSATEG00000000976-9472.103Anabas_testudineus
ENSPTRG00000004580CHD49083.004ENSATEG00000016428chd4a9586.192Anabas_testudineus
ENSPTRG00000004580CHD48574.924ENSATEG00000021141-9675.853Anabas_testudineus
ENSPTRG00000004580CHD49988.321ENSAPLG00000014146-10088.147Anas_platyrhynchos
ENSPTRG00000004580CHD49989.652ENSACAG00000006231-10089.216Anolis_carolinensis
ENSPTRG00000004580CHD410099.524ENSANAG00000035685-10099.524Aotus_nancymaae
ENSPTRG00000004580CHD49676.276ENSACLG00000024468-9578.363Astatotilapia_calliptera
ENSPTRG00000004580CHD49577.523ENSACLG00000015837chd4a9677.542Astatotilapia_calliptera
ENSPTRG00000004580CHD49678.116ENSAMXG00000010614-9678.507Astyanax_mexicanus
ENSPTRG00000004580CHD49680.991ENSAMXG00000019969chd4a9879.707Astyanax_mexicanus
ENSPTRG00000004580CHD410098.797ENSBTAG00000014734CHD410098.797Bos_taurus
ENSPTRG00000004580CHD410099.582ENSCJAG00000008114-10099.582Callithrix_jacchus
ENSPTRG00000004580CHD410099.372ENSCAFG00000014929CHD410099.372Canis_familiaris
ENSPTRG00000004580CHD410098.326ENSCAFG00020002892-10098.326Canis_lupus_dingo
ENSPTRG00000004580CHD410098.326ENSCHIG00000020766-10098.326Capra_hircus
ENSPTRG00000004580CHD49997.638ENSTSYG00000006069-9997.638Carlito_syrichta
ENSPTRG00000004580CHD49899.042ENSCPOG00000008504-9999.042Cavia_porcellus
ENSPTRG00000004580CHD410099.634ENSCCAG00000009686-10099.634Cebus_capucinus
ENSPTRG00000004580CHD410099.686ENSCATG00000006345-10099.686Cercocebus_atys
ENSPTRG00000004580CHD410098.692ENSCLAG00000012244-10098.692Chinchilla_lanigera
ENSPTRG00000004580CHD410099.739ENSCSAG00000010429-10099.739Chlorocebus_sabaeus
ENSPTRG00000004580CHD483100.000ENSCHOG00000000277-8499.200Choloepus_hoffmanni
ENSPTRG00000004580CHD49989.963ENSCPBG00000027716-9690.244Chrysemys_picta_bellii
ENSPTRG00000004580CHD49354.981ENSCSAVG00000004448-9961.783Ciona_savignyi
ENSPTRG00000004580CHD410095.037ENSCANG00000035317-10097.313Colobus_angolensis_palliatus
ENSPTRG00000004580CHD410097.970ENSCGRG00001020662Chd410097.970Cricetulus_griseus_chok1gshd
ENSPTRG00000004580CHD49998.281ENSCGRG00000015920Chd410098.281Cricetulus_griseus_crigri
ENSPTRG00000004580CHD49678.708ENSCSEG00000019943-9877.327Cynoglossus_semilaevis
ENSPTRG00000004580CHD48988.235ENSCSEG00000017173chd4a9288.235Cynoglossus_semilaevis
ENSPTRG00000004580CHD49370.704ENSCSEG00000018096-9269.933Cynoglossus_semilaevis
ENSPTRG00000004580CHD49677.250ENSCVAG00000001128-9678.183Cyprinodon_variegatus
ENSPTRG00000004580CHD49093.151ENSCVAG00000004940chd4a9092.727Cyprinodon_variegatus
ENSPTRG00000004580CHD49371.373ENSCVAG00000016412-9471.204Cyprinodon_variegatus
ENSPTRG00000004580CHD49778.118ENSDARG00000063535chd4a9378.698Danio_rerio
ENSPTRG00000004580CHD410098.641ENSDNOG00000001134-10098.641Dasypus_novemcinctus
ENSPTRG00000004580CHD49997.067ENSDORG00000001847Chd49897.067Dipodomys_ordii
ENSPTRG00000004580CHD47773.351ENSEBUG00000012670chd4a9275.653Eptatretus_burgeri
ENSPTRG00000004580CHD410099.320ENSEASG00005016150-10099.320Equus_asinus_asinus
ENSPTRG00000004580CHD410099.320ENSECAG00000022005CHD410099.320Equus_caballus
ENSPTRG00000004580CHD49379.450ENSELUG00000021276chd4a9579.248Esox_lucius
ENSPTRG00000004580CHD49578.420ENSELUG00000018086-9779.440Esox_lucius
ENSPTRG00000004580CHD410099.372ENSFCAG00000006877-10099.372Felis_catus
ENSPTRG00000004580CHD48193.750ENSFALG00000004785-9793.674Ficedula_albicollis
ENSPTRG00000004580CHD410096.826ENSFDAG00000020219-10096.826Fukomys_damarensis
ENSPTRG00000004580CHD48682.648ENSFHEG00000003253-9380.531Fundulus_heteroclitus
ENSPTRG00000004580CHD49676.672ENSFHEG00000002013chd4a9576.751Fundulus_heteroclitus
ENSPTRG00000004580CHD48878.261ENSFHEG00000012736-9779.039Fundulus_heteroclitus
ENSPTRG00000004580CHD45188.259ENSGMOG00000003394-7888.259Gadus_morhua
ENSPTRG00000004580CHD45781.540ENSGMOG00000015722chd4a9485.163Gadus_morhua
ENSPTRG00000004580CHD46997.561ENSGMOG00000017923-7793.939Gadus_morhua
ENSPTRG00000004580CHD46191.286ENSGALG00000013565-9891.544Gallus_gallus
ENSPTRG00000004580CHD49676.259ENSGAFG00000002778chd4a9377.180Gambusia_affinis
ENSPTRG00000004580CHD48391.743ENSGAFG00000014337-9688.462Gambusia_affinis
ENSPTRG00000004580CHD45381.923ENSGACG00000010099-9281.635Gasterosteus_aculeatus
ENSPTRG00000004580CHD49675.583ENSGACG00000018705chd4a9976.157Gasterosteus_aculeatus
ENSPTRG00000004580CHD49989.807ENSGAGG00000001416-9789.984Gopherus_agassizii
ENSPTRG00000004580CHD4100100.000ENSGGOG00000001930CHD4100100.000Gorilla_gorilla
ENSPTRG00000004580CHD49179.538ENSHBUG00000019146chd4a9574.777Haplochromis_burtoni
ENSPTRG00000004580CHD49676.312ENSHBUG00000016000-9578.419Haplochromis_burtoni
ENSPTRG00000004580CHD410098.431ENSHGLG00000003093-10098.431Heterocephalus_glaber_female
ENSPTRG00000004580CHD410098.745ENSHGLG00100007450-10098.745Heterocephalus_glaber_male
ENSPTRG00000004580CHD48369.052ENSHCOG00000014308-8873.776Hippocampus_comes
ENSPTRG00000004580CHD48974.825ENSHCOG00000017525-9874.722Hippocampus_comes
ENSPTRG00000004580CHD49680.261ENSIPUG00000005694chd49680.700Ictalurus_punctatus
ENSPTRG00000004580CHD49999.004ENSSTOG00000007601-9999.004Ictidomys_tridecemlineatus
ENSPTRG00000004580CHD410098.013ENSJJAG00000012394Chd410098.013Jaculus_jaculus
ENSPTRG00000004580CHD49676.944ENSKMAG00000019286chd4a9577.553Kryptolebias_marmoratus
ENSPTRG00000004580CHD49974.031ENSKMAG00000007932-9277.154Kryptolebias_marmoratus
ENSPTRG00000004580CHD49370.866ENSKMAG00000017827-9079.736Kryptolebias_marmoratus
ENSPTRG00000004580CHD49675.769ENSLBEG00000012434CHD49275.390Labrus_bergylta
ENSPTRG00000004580CHD48073.966ENSLBEG00000026652-9573.383Labrus_bergylta
ENSPTRG00000004580CHD49974.924ENSLOCG00000007438chd4a9576.348Lepisosteus_oculatus
ENSPTRG00000004580CHD47892.492ENSLAFG00000022842-10095.818Loxodonta_africana
ENSPTRG00000004580CHD410099.791ENSMFAG00000003188-10099.791Macaca_fascicularis
ENSPTRG00000004580CHD410098.196ENSMMUG00000018685-10098.196Macaca_mulatta
ENSPTRG00000004580CHD410097.806ENSMNEG00000044776-10097.806Macaca_nemestrina
ENSPTRG00000004580CHD410097.701ENSMLEG00000024661-10097.701Mandrillus_leucophaeus
ENSPTRG00000004580CHD49877.667ENSMAMG00000018954chd4a9677.790Mastacembelus_armatus
ENSPTRG00000004580CHD49371.085ENSMAMG00000002137-9170.240Mastacembelus_armatus
ENSPTRG00000004580CHD49674.817ENSMAMG00000002584-8985.714Mastacembelus_armatus
ENSPTRG00000004580CHD49676.582ENSMZEG00005017761-9578.363Maylandia_zebra
ENSPTRG00000004580CHD49578.453ENSMZEG00005001706chd4a9677.529Maylandia_zebra
ENSPTRG00000004580CHD49990.961ENSMGAG00000014084-10090.664Meleagris_gallopavo
ENSPTRG00000004580CHD410099.477ENSMICG00000006588-10099.477Microcebus_murinus
ENSPTRG00000004580CHD410097.971ENSMOCG00000020624Chd410097.971Microtus_ochrogaster
ENSPTRG00000004580CHD48370.521ENSMMOG00000013429-8675.388Mola_mola
ENSPTRG00000004580CHD49677.362ENSMMOG00000000073chd4a9976.518Mola_mola
ENSPTRG00000004580CHD49675.475ENSMMOG00000015971-9576.715Mola_mola
ENSPTRG00000004580CHD48295.521ENSMODG00000018094-10095.521Monodelphis_domestica
ENSPTRG00000004580CHD49675.663ENSMALG00000022494-9576.914Monopterus_albus
ENSPTRG00000004580CHD49677.778ENSMALG00000005766chd4a9676.343Monopterus_albus
ENSPTRG00000004580CHD410098.075ENSMUSG00000063870Chd410098.075Mus_musculus
ENSPTRG00000004580CHD410098.077MGP_SPRETEiJ_G0029911Chd410098.077Mus_spretus
ENSPTRG00000004580CHD410099.320ENSMPUG00000016859-10099.320Mustela_putorius_furo
ENSPTRG00000004580CHD410098.954ENSMLUG00000014343-9998.954Myotis_lucifugus
ENSPTRG00000004580CHD410097.071ENSNGAG00000016920Chd410097.071Nannospalax_galili
ENSPTRG00000004580CHD49676.257ENSNBRG00000021576-9578.307Neolamprologus_brichardi
ENSPTRG00000004580CHD49998.629ENSNLEG00000004330-9698.629Nomascus_leucogenys
ENSPTRG00000004580CHD48299.200ENSMEUG00000015294-8499.200Notamacropus_eugenii
ENSPTRG00000004580CHD48798.023ENSOPRG00000003477-8498.023Ochotona_princeps
ENSPTRG00000004580CHD49998.481ENSODEG00000003114-9998.481Octodon_degus
ENSPTRG00000004580CHD49876.158ENSONIG00000012953-9478.643Oreochromis_niloticus
ENSPTRG00000004580CHD49578.832ENSONIG00000006992chd4a9379.823Oreochromis_niloticus
ENSPTRG00000004580CHD410096.653ENSOCUG00000008215-9996.653Oryctolagus_cuniculus
ENSPTRG00000004580CHD49770.398ENSORLG00000017190-9082.273Oryzias_latipes
ENSPTRG00000004580CHD49676.899ENSORLG00000006310chd4a9377.796Oryzias_latipes
ENSPTRG00000004580CHD49776.452ENSORLG00000012477-9677.186Oryzias_latipes
ENSPTRG00000004580CHD49676.604ENSORLG00020006529chd4a9377.796Oryzias_latipes_hni
ENSPTRG00000004580CHD48369.371ENSORLG00020011739-8775.070Oryzias_latipes_hni
ENSPTRG00000004580CHD49776.400ENSORLG00020004891-9276.461Oryzias_latipes_hni
ENSPTRG00000004580CHD49678.240ENSORLG00015010692-9678.057Oryzias_latipes_hsok
ENSPTRG00000004580CHD49678.478ENSORLG00015019674chd4a9678.283Oryzias_latipes_hsok
ENSPTRG00000004580CHD49368.709ENSOMEG00000014929-9368.567Oryzias_melastigma
ENSPTRG00000004580CHD49776.724ENSOMEG00000013408-9177.096Oryzias_melastigma
ENSPTRG00000004580CHD49677.477ENSOMEG00000016394chd4a9092.377Oryzias_melastigma
ENSPTRG00000004580CHD410097.732ENSOGAG00000010031-10097.732Otolemur_garnettii
ENSPTRG00000004580CHD49898.671ENSOARG00000007398-10098.671Ovis_aries
ENSPTRG00000004580CHD410099.896ENSPPAG00000029007-10099.896Pan_paniscus
ENSPTRG00000004580CHD410099.268ENSPPRG00000001388-10099.268Panthera_pardus
ENSPTRG00000004580CHD410099.320ENSPTIG00000010979-10099.320Panthera_tigris_altaica
ENSPTRG00000004580CHD410099.634ENSPANG00000025409-10099.634Papio_anubis
ENSPTRG00000004580CHD49670.360ENSPKIG00000012023-9571.840Paramormyrops_kingsleyae
ENSPTRG00000004580CHD49879.071ENSPKIG00000008268chd4a9380.752Paramormyrops_kingsleyae
ENSPTRG00000004580CHD49988.866ENSPSIG00000015546-9988.311Pelodiscus_sinensis
ENSPTRG00000004580CHD48870.806ENSPMGG00000007681-9969.780Periophthalmus_magnuspinnatus
ENSPTRG00000004580CHD49379.652ENSPMGG00000022981chd4a9779.370Periophthalmus_magnuspinnatus
ENSPTRG00000004580CHD410096.499ENSPEMG00000010290Chd410096.499Peromyscus_maniculatus_bairdii
ENSPTRG00000004580CHD49397.718ENSPCIG00000001846-10097.718Phascolarctos_cinereus
ENSPTRG00000004580CHD49677.526ENSPFOG00000009089chd4a9378.564Poecilia_formosa
ENSPTRG00000004580CHD48770.816ENSPFOG00000016981-9270.781Poecilia_formosa
ENSPTRG00000004580CHD49676.100ENSPFOG00000013889-9676.313Poecilia_formosa
ENSPTRG00000004580CHD49677.687ENSPLAG00000012712chd4a9377.596Poecilia_latipinna
ENSPTRG00000004580CHD49874.645ENSPLAG00000004006-9179.648Poecilia_latipinna
ENSPTRG00000004580CHD49677.603ENSPMEG00000009633chd4a9478.202Poecilia_mexicana
ENSPTRG00000004580CHD49371.509ENSPMEG00000015657-9471.243Poecilia_mexicana
ENSPTRG00000004580CHD49675.082ENSPMEG00000006064-9675.701Poecilia_mexicana
ENSPTRG00000004580CHD49874.305ENSPREG00000011359-9276.397Poecilia_reticulata
ENSPTRG00000004580CHD48894.500ENSPREG00000001202chd4a9094.500Poecilia_reticulata
ENSPTRG00000004580CHD49997.222ENSPPYG00000004192-10097.222Pongo_abelii
ENSPTRG00000004580CHD474100.000ENSPCAG00000007120-85100.000Procavia_capensis
ENSPTRG00000004580CHD410098.640ENSPCOG00000018635-10098.640Propithecus_coquereli
ENSPTRG00000004580CHD49897.534ENSPVAG00000012574-10097.534Pteropus_vampyrus
ENSPTRG00000004580CHD49874.326ENSPNYG00000023020-9276.785Pundamilia_nyererei
ENSPTRG00000004580CHD49578.913ENSPNYG00000002663chd4a9479.048Pundamilia_nyererei
ENSPTRG00000004580CHD49678.007ENSPNAG00000011129-9478.977Pygocentrus_nattereri
ENSPTRG00000004580CHD49679.757ENSPNAG00000009629chd4a9287.137Pygocentrus_nattereri
ENSPTRG00000004580CHD410097.251ENSRNOG00000018309Chd410097.251Rattus_norvegicus
ENSPTRG00000004580CHD49799.730ENSRBIG00000041491-10099.730Rhinopithecus_bieti
ENSPTRG00000004580CHD410099.738ENSRROG00000042446-10099.738Rhinopithecus_roxellana
ENSPTRG00000004580CHD410098.013ENSSBOG00000020782-10098.013Saimiri_boliviensis_boliviensis
ENSPTRG00000004580CHD49482.566ENSSHAG00000015079-9594.312Sarcophilus_harrisii
ENSPTRG00000004580CHD49877.215ENSSFOG00015002908chd49680.388Scleropages_formosus
ENSPTRG00000004580CHD49595.673ENSSMAG00000012594chd4a9578.312Scophthalmus_maximus
ENSPTRG00000004580CHD49369.226ENSSMAG00000017926-9269.046Scophthalmus_maximus
ENSPTRG00000004580CHD49674.505ENSSMAG00000010969-9575.305Scophthalmus_maximus
ENSPTRG00000004580CHD49379.730ENSSDUG00000002891chd4a9779.101Seriola_dumerili
ENSPTRG00000004580CHD49479.854ENSSDUG00000012051-9376.624Seriola_dumerili
ENSPTRG00000004580CHD48986.345ENSSLDG00000023821-8786.261Seriola_lalandi_dorsalis
ENSPTRG00000004580CHD49873.181ENSSLDG00000018645chd4a9877.088Seriola_lalandi_dorsalis
ENSPTRG00000004580CHD49470.281ENSSLDG00000019750-9570.664Seriola_lalandi_dorsalis
ENSPTRG00000004580CHD470100.000ENSSARG00000012988-72100.000Sorex_araneus
ENSPTRG00000004580CHD49988.820ENSSPUG00000015131-10089.525Sphenodon_punctatus
ENSPTRG00000004580CHD49371.316ENSSPAG00000018749-9471.246Stegastes_partitus
ENSPTRG00000004580CHD49679.096ENSSPAG00000013983chd4a9978.540Stegastes_partitus
ENSPTRG00000004580CHD410099.006ENSSSCG00000000697-10099.006Sus_scrofa
ENSPTRG00000004580CHD49990.224ENSTGUG00000013329-10089.964Taeniopygia_guttata
ENSPTRG00000004580CHD49371.735ENSTRUG00000007623-8877.974Takifugu_rubripes
ENSPTRG00000004580CHD49576.991ENSTRUG00000007202-9976.342Takifugu_rubripes
ENSPTRG00000004580CHD49577.268ENSTNIG00000008031-9876.714Tetraodon_nigroviridis
ENSPTRG00000004580CHD49766.974ENSTNIG00000004095-9574.790Tetraodon_nigroviridis
ENSPTRG00000004580CHD484100.000ENSTBEG00000011379-90100.000Tupaia_belangeri
ENSPTRG00000004580CHD49893.232ENSTTRG00000016102-10093.232Tursiops_truncatus
ENSPTRG00000004580CHD410097.577ENSUAMG00000016452-9999.096Ursus_americanus
ENSPTRG00000004580CHD410095.031ENSUMAG00000005336-9899.149Ursus_maritimus
ENSPTRG00000004580CHD410099.372ENSVVUG00000011414-10099.372Vulpes_vulpes
ENSPTRG00000004580CHD46587.378ENSXETG00000026410chd49992.352Xenopus_tropicalis
ENSPTRG00000004580CHD45284.248ENSXETG00000018961-9981.382Xenopus_tropicalis
ENSPTRG00000004580CHD49676.217ENSXCOG00000019269-9676.391Xiphophorus_couchianus
ENSPTRG00000004580CHD47783.142ENSXMAG00000001037chd4a8883.616Xiphophorus_maculatus
ENSPTRG00000004580CHD48682.727ENSXMAG00000014686-9382.727Xiphophorus_maculatus
ENSPTRG00000004580CHD49676.217ENSXMAG00000011263-9676.322Xiphophorus_maculatus

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