EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000005041 (Gene tree)
Gene ID: 451960
Gene Symbol: GTSF1
Alias: -
Full Name: gametocyte specific factor 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 17881 bases
Position: chr12:35272280-35290160
Accession: 5409
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000008581	zf-U11-48K	PF05253.12	7.8e-20	1	2
ENSPTRP00000008581	zf-U11-48K	PF05253.12	7.8e-20	2	2
ENSPTRP00000060449	zf-U11-48K	PF05253.12	9e-20	1	2
ENSPTRP00000060449	zf-U11-48K	PF05253.12	9e-20	2	2
ENSPTRP00000064765	zf-U11-48K	PF05253.12	9.2e-20	1	2
ENSPTRP00000064765	zf-U11-48K	PF05253.12	9.2e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000073148	-	528	-	ENSPTRP00000060449	175 (aa)	-	H2RG03
ENSPTRT00000009279	-	1374	XM_003952169	ENSPTRP00000008581	167 (aa)	XP_003952218	A0A2J8Q0Y7
ENSPTRT00000077546	-	1275	-	ENSPTRP00000064765	176 (aa)	-	A0A2I3RK85

Gene Model

Click here to download ENSPTRG00000005041's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000005041's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000005041	GTSF1	100	100.000	ENSG00000170627	GTSF1	100	100.000	Homo_sapiens
ENSPTRG00000005041	GTSF1	88	47.619	ENSAPOG00000022724	-	95	47.619	Acanthochromis_polyacanthus
ENSPTRG00000005041	GTSF1	98	92.121	ENSAMEG00000000939	GTSF1	98	92.121	Ailuropoda_melanoleuca
ENSPTRG00000005041	GTSF1	88	46.939	ENSAOCG00000022214	-	72	45.806	Amphiprion_ocellaris
ENSPTRG00000005041	GTSF1	75	60.317	ENSAPLG00000004814	GTSF1	93	60.317	Anas_platyrhynchos
ENSPTRG00000005041	GTSF1	69	47.414	ENSACAG00000029590	-	95	47.414	Anolis_carolinensis
ENSPTRG00000005041	GTSF1	97	62.963	ENSACAG00000014260	-	95	62.577	Anolis_carolinensis
ENSPTRG00000005041	GTSF1	100	95.808	ENSANAG00000024529	GTSF1	100	95.808	Aotus_nancymaae
ENSPTRG00000005041	GTSF1	100	92.216	ENSBTAG00000018085	GTSF1	100	92.216	Bos_taurus
ENSPTRG00000005041	GTSF1	100	92.216	ENSCJAG00000039915	-	88	92.216	Callithrix_jacchus
ENSPTRG00000005041	GTSF1	100	97.605	ENSCJAG00000018968	-	100	97.605	Callithrix_jacchus
ENSPTRG00000005041	GTSF1	100	92.814	ENSCAFG00000006465	-	100	92.814	Canis_familiaris
ENSPTRG00000005041	GTSF1	100	92.814	ENSCAFG00020020373	-	100	91.477	Canis_lupus_dingo
ENSPTRG00000005041	GTSF1	98	91.411	ENSCHIG00000012215	-	97	89.759	Capra_hircus
ENSPTRG00000005041	GTSF1	100	73.054	ENSTSYG00000035266	-	100	73.054	Carlito_syrichta
ENSPTRG00000005041	GTSF1	99	90.361	ENSTSYG00000004679	-	100	90.361	Carlito_syrichta
ENSPTRG00000005041	GTSF1	100	91.018	ENSCPOG00000008743	GTSF1	100	91.018	Cavia_porcellus
ENSPTRG00000005041	GTSF1	97	71.345	ENSCCAG00000032808	GTSF1	100	71.345	Cebus_capucinus
ENSPTRG00000005041	GTSF1	100	100.000	ENSCATG00000036328	GTSF1	100	100.000	Cercocebus_atys
ENSPTRG00000005041	GTSF1	100	90.419	ENSCLAG00000012811	GTSF1	100	90.419	Chinchilla_lanigera
ENSPTRG00000005041	GTSF1	95	98.734	ENSCSAG00000005394	GTSF1	100	98.734	Chlorocebus_sabaeus
ENSPTRG00000005041	GTSF1	100	91.018	ENSCHOG00000001659	GTSF1	100	91.018	Choloepus_hoffmanni
ENSPTRG00000005041	GTSF1	95	58.125	ENSCPBG00000024905	-	95	53.714	Chrysemys_picta_bellii
ENSPTRG00000005041	GTSF1	99	68.675	ENSCPBG00000005134	-	72	69.277	Chrysemys_picta_bellii
ENSPTRG00000005041	GTSF1	100	98.802	ENSCANG00000033118	GTSF1	100	98.802	Colobus_angolensis_palliatus
ENSPTRG00000005041	GTSF1	100	93.413	ENSCANG00000031776	-	100	93.413	Colobus_angolensis_palliatus
ENSPTRG00000005041	GTSF1	100	91.617	ENSCGRG00001013814	Gtsf1	100	91.617	Cricetulus_griseus_chok1gshd
ENSPTRG00000005041	GTSF1	100	91.617	ENSCGRG00000007733	Gtsf1	100	91.617	Cricetulus_griseus_crigri
ENSPTRG00000005041	GTSF1	94	90.446	ENSDNOG00000001438	-	90	91.026	Dasypus_novemcinctus
ENSPTRG00000005041	GTSF1	100	92.216	ENSDORG00000003228	Gtsf1	100	92.216	Dipodomys_ordii
ENSPTRG00000005041	GTSF1	100	89.820	ENSETEG00000009310	GTSF1	100	89.820	Echinops_telfairi
ENSPTRG00000005041	GTSF1	100	92.814	ENSEASG00005010260	GTSF1	90	92.814	Equus_asinus_asinus
ENSPTRG00000005041	GTSF1	100	92.814	ENSECAG00000013618	GTSF1	100	92.814	Equus_caballus
ENSPTRG00000005041	GTSF1	100	92.814	ENSEEUG00000005185	GTSF1	100	92.814	Erinaceus_europaeus
ENSPTRG00000005041	GTSF1	100	66.467	ENSFCAG00000023672	-	96	63.429	Felis_catus
ENSPTRG00000005041	GTSF1	100	92.814	ENSFCAG00000010156	-	100	92.814	Felis_catus
ENSPTRG00000005041	GTSF1	75	54.762	ENSFALG00000007613	-	100	54.762	Ficedula_albicollis
ENSPTRG00000005041	GTSF1	100	87.425	ENSFDAG00000009383	GTSF1	100	87.425	Fukomys_damarensis
ENSPTRG00000005041	GTSF1	96	54.658	ENSGALG00000001109	GTSF1	99	54.658	Gallus_gallus
ENSPTRG00000005041	GTSF1	88	51.701	ENSGACG00000010783	-	80	51.701	Gasterosteus_aculeatus
ENSPTRG00000005041	GTSF1	66	45.045	ENSGAGG00000018216	-	89	45.045	Gopherus_agassizii
ENSPTRG00000005041	GTSF1	62	51.887	ENSGAGG00000016342	-	99	51.887	Gopherus_agassizii
ENSPTRG00000005041	GTSF1	100	61.582	ENSGAGG00000011062	GTSF1	91	61.582	Gopherus_agassizii
ENSPTRG00000005041	GTSF1	100	100.000	ENSGGOG00000016063	GTSF1	100	100.000	Gorilla_gorilla
ENSPTRG00000005041	GTSF1	100	89.222	ENSHGLG00000002436	GTSF1	100	89.222	Heterocephalus_glaber_female
ENSPTRG00000005041	GTSF1	100	89.222	ENSHGLG00100017301	GTSF1	100	89.222	Heterocephalus_glaber_male
ENSPTRG00000005041	GTSF1	96	48.780	ENSIPUG00000002483	-	84	49.068	Ictalurus_punctatus
ENSPTRG00000005041	GTSF1	100	92.216	ENSSTOG00000025170	GTSF1	100	92.216	Ictidomys_tridecemlineatus
ENSPTRG00000005041	GTSF1	100	83.234	ENSJJAG00000017442	-	100	83.234	Jaculus_jaculus
ENSPTRG00000005041	GTSF1	100	89.222	ENSJJAG00000003323	-	100	89.222	Jaculus_jaculus
ENSPTRG00000005041	GTSF1	88	52.381	ENSKMAG00000006038	-	80	52.381	Kryptolebias_marmoratus
ENSPTRG00000005041	GTSF1	96	60.625	ENSLACG00000008870	GTSF1	83	60.625	Latimeria_chalumnae
ENSPTRG00000005041	GTSF1	97	93.210	ENSLAFG00000016318	GTSF1	97	93.210	Loxodonta_africana
ENSPTRG00000005041	GTSF1	100	100.000	ENSMFAG00000041178	GTSF1	100	100.000	Macaca_fascicularis
ENSPTRG00000005041	GTSF1	100	100.000	ENSMMUG00000003758	GTSF1	100	100.000	Macaca_mulatta
ENSPTRG00000005041	GTSF1	100	100.000	ENSMNEG00000036779	GTSF1	100	100.000	Macaca_nemestrina
ENSPTRG00000005041	GTSF1	100	99.401	ENSMLEG00000028375	GTSF1	100	99.401	Mandrillus_leucophaeus
ENSPTRG00000005041	GTSF1	80	57.463	ENSMGAG00000000685	GTSF1	95	57.463	Meleagris_gallopavo
ENSPTRG00000005041	GTSF1	100	68.263	ENSMAUG00000018746	Gtsf1	99	68.263	Mesocricetus_auratus
ENSPTRG00000005041	GTSF1	100	92.814	ENSMICG00000008444	-	100	92.814	Microcebus_murinus
ENSPTRG00000005041	GTSF1	100	91.617	ENSMOCG00000018889	Gtsf1	100	91.617	Microtus_ochrogaster
ENSPTRG00000005041	GTSF1	100	84.431	ENSMODG00000019422	GTSF1	100	84.431	Monodelphis_domestica
ENSPTRG00000005041	GTSF1	100	91.617	MGP_CAROLIEiJ_G0020379	Gtsf1	99	92.857	Mus_caroli
ENSPTRG00000005041	GTSF1	100	91.617	ENSMUSG00000022487	Gtsf1	99	92.857	Mus_musculus
ENSPTRG00000005041	GTSF1	100	91.018	MGP_PahariEiJ_G0020378	Gtsf1	99	92.063	Mus_pahari
ENSPTRG00000005041	GTSF1	100	91.617	MGP_SPRETEiJ_G0021272	Gtsf1	99	92.857	Mus_spretus
ENSPTRG00000005041	GTSF1	100	92.216	ENSMPUG00000019323	-	100	92.216	Mustela_putorius_furo
ENSPTRG00000005041	GTSF1	100	84.431	ENSMPUG00000019140	-	100	84.431	Mustela_putorius_furo
ENSPTRG00000005041	GTSF1	98	93.293	ENSMPUG00000005669	-	98	93.293	Mustela_putorius_furo
ENSPTRG00000005041	GTSF1	100	91.018	ENSMLUG00000012961	-	100	91.018	Myotis_lucifugus
ENSPTRG00000005041	GTSF1	100	88.024	ENSMLUG00000026557	-	100	88.024	Myotis_lucifugus
ENSPTRG00000005041	GTSF1	100	92.216	ENSNGAG00000014213	Gtsf1	100	92.216	Nannospalax_galili
ENSPTRG00000005041	GTSF1	100	99.401	ENSNLEG00000017635	GTSF1	100	99.401	Nomascus_leucogenys
ENSPTRG00000005041	GTSF1	100	73.653	ENSMEUG00000016206	GTSF1	100	73.653	Notamacropus_eugenii
ENSPTRG00000005041	GTSF1	100	67.066	ENSOPRG00000017277	GTSF1	100	67.066	Ochotona_princeps
ENSPTRG00000005041	GTSF1	100	90.419	ENSODEG00000014220	GTSF1	100	90.419	Octodon_degus
ENSPTRG00000005041	GTSF1	98	66.061	ENSOANG00000011386	GTSF1	99	66.061	Ornithorhynchus_anatinus
ENSPTRG00000005041	GTSF1	100	91.018	ENSOCUG00000024495	GTSF1	100	91.018	Oryctolagus_cuniculus
ENSPTRG00000005041	GTSF1	72	47.107	ENSORLG00015005017	-	71	50.877	Oryzias_latipes_hsok
ENSPTRG00000005041	GTSF1	97	88.824	ENSOGAG00000017227	GTSF1	100	88.824	Otolemur_garnettii
ENSPTRG00000005041	GTSF1	100	92.814	ENSOARG00000016162	GTSF1	100	92.814	Ovis_aries
ENSPTRG00000005041	GTSF1	100	100.000	ENSPPAG00000028506	GTSF1	100	100.000	Pan_paniscus
ENSPTRG00000005041	GTSF1	100	92.814	ENSPPRG00000004344	-	100	92.814	Panthera_pardus
ENSPTRG00000005041	GTSF1	100	83.832	ENSPPRG00000017612	-	95	80.000	Panthera_pardus
ENSPTRG00000005041	GTSF1	100	92.814	ENSPTIG00000020415	-	100	92.814	Panthera_tigris_altaica
ENSPTRG00000005041	GTSF1	100	84.431	ENSPTIG00000010868	-	95	80.571	Panthera_tigris_altaica
ENSPTRG00000005041	GTSF1	100	100.000	ENSPANG00000020579	GTSF1	100	100.000	Papio_anubis
ENSPTRG00000005041	GTSF1	69	49.573	ENSPSIG00000009839	-	73	49.573	Pelodiscus_sinensis
ENSPTRG00000005041	GTSF1	98	66.667	ENSPSIG00000009968	GTSF1	81	66.667	Pelodiscus_sinensis
ENSPTRG00000005041	GTSF1	100	91.617	ENSPEMG00000009595	Gtsf1	100	91.617	Peromyscus_maniculatus_bairdii
ENSPTRG00000005041	GTSF1	100	80.838	ENSPCIG00000006731	GTSF1	100	80.838	Phascolarctos_cinereus
ENSPTRG00000005041	GTSF1	100	100.000	ENSPPYG00000004605	GTSF1	100	100.000	Pongo_abelii
ENSPTRG00000005041	GTSF1	100	92.216	ENSPCOG00000016907	-	100	92.216	Propithecus_coquereli
ENSPTRG00000005041	GTSF1	99	79.290	ENSPCOG00000015201	-	99	79.290	Propithecus_coquereli
ENSPTRG00000005041	GTSF1	100	92.814	ENSPVAG00000000333	GTSF1	100	92.814	Pteropus_vampyrus
ENSPTRG00000005041	GTSF1	90	51.316	ENSPNAG00000005737	-	85	50.625	Pygocentrus_nattereri
ENSPTRG00000005041	GTSF1	100	91.617	ENSRNOG00000036831	Gtsf1	88	91.617	Rattus_norvegicus
ENSPTRG00000005041	GTSF1	100	99.401	ENSRBIG00000043438	-	100	99.401	Rhinopithecus_bieti
ENSPTRG00000005041	GTSF1	100	91.018	ENSRBIG00000039916	-	89	91.018	Rhinopithecus_bieti
ENSPTRG00000005041	GTSF1	100	100.000	ENSRROG00000008137	GTSF1	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000005041	GTSF1	100	98.204	ENSSBOG00000029460	GTSF1	100	98.204	Saimiri_boliviensis_boliviensis
ENSPTRG00000005041	GTSF1	100	84.431	ENSSHAG00000011633	GTSF1	100	84.431	Sarcophilus_harrisii
ENSPTRG00000005041	GTSF1	78	92.308	ENSSARG00000004928	GTSF1	78	92.308	Sorex_araneus
ENSPTRG00000005041	GTSF1	98	50.303	ENSSPUG00000010064	GTSF1	93	72.727	Sphenodon_punctatus
ENSPTRG00000005041	GTSF1	100	92.216	ENSSSCG00000026333	GTSF1	100	92.216	Sus_scrofa
ENSPTRG00000005041	GTSF1	76	57.031	ENSTGUG00000002008	-	100	57.031	Taeniopygia_guttata
ENSPTRG00000005041	GTSF1	96	90.683	ENSTBEG00000006154	GTSF1	100	90.683	Tupaia_belangeri
ENSPTRG00000005041	GTSF1	100	89.820	ENSTTRG00000004470	GTSF1	100	89.820	Tursiops_truncatus
ENSPTRG00000005041	GTSF1	100	93.413	ENSUAMG00000021669	GTSF1	100	92.045	Ursus_americanus
ENSPTRG00000005041	GTSF1	100	93.413	ENSUMAG00000011279	GTSF1	100	93.413	Ursus_maritimus
ENSPTRG00000005041	GTSF1	100	91.018	ENSVPAG00000007016	GTSF1	100	91.018	Vicugna_pacos
ENSPTRG00000005041	GTSF1	100	92.814	ENSVVUG00000023687	-	84	92.814	Vulpes_vulpes
ENSPTRG00000005041	GTSF1	96	63.354	ENSXETG00000033546	gtsf1	71	63.975	Xenopus_tropicalis