EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000005071 (Gene tree)
Gene ID: 746457
Gene Symbol: RAB5B
Alias: -
Full Name: RAB5B%2C member RAS oncogene family
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 20619 bases
Position: chr12:33864510-33885128
Accession: 10512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000088257	MMR_HSR1	PF01926.23	0.00026	1	1
ENSPTRP00000065340	MMR_HSR1	PF01926.23	0.00028	1	1
ENSPTRP00000008634	MMR_HSR1	PF01926.23	0.00029	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000009333	-	3472	XM_003313606	ENSPTRP00000008634	227 (aa)	XP_003313654	H2Q672
ENSPTRT00000078081	-	525	-	ENSPTRP00000081789	174 (aa)	-	A0A2I3SXQ6
ENSPTRT00000081543	-	651	-	ENSPTRP00000088257	216 (aa)	-	A0A2I3TG75
ENSPTRT00000093653	-	672	-	ENSPTRP00000065340	223 (aa)	-	A0A2I3RL20
ENSPTRT00000095667	-	222	-	ENSPTRP00000088990	73 (aa)	-	A0A2J8Q1D4

Gene Model

Click here to download ENSPTRG00000005071's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr04014	Ras signaling pathway	KEGG
ptr04144	Endocytosis	KEGG
ptr04145	Phagosome	KEGG
ptr04962	Vasopressin-regulated water reabsorption	KEGG
ptr05146	Amoebiasis	KEGG
ptr05152	Tuberculosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000005071's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000005071	RAB5B	82	38.587	ENSPTRG00000016455	RAB33B	79	38.798
ENSPTRG00000005071	RAB5B	77	42.442	ENSPTRG00000015359	RAB7A	83	42.442
ENSPTRG00000005071	RAB5B	92	35.294	ENSPTRG00000021673	RAB9A	99	35.294
ENSPTRG00000005071	RAB5B	89	43.367	ENSPTRG00000011989	RAB1A	96	43.367
ENSPTRG00000005071	RAB5B	82	32.787	ENSPTRG00000034469	HRAS	96	32.787
ENSPTRG00000005071	RAB5B	62	30.282	ENSPTRG00000001846	ARL8A	73	30.282
ENSPTRG00000005071	RAB5B	90	43.689	ENSPTRG00000010422	RAB11B	94	43.689
ENSPTRG00000005071	RAB5B	75	44.720	ENSPTRG00000021312	RAB14	75	44.720
ENSPTRG00000005071	RAB5B	75	43.478	ENSPTRG00000020284	RAB2A	76	43.478
ENSPTRG00000005071	RAB5B	55	30.159	ENSPTRG00000048701	ARL4A	60	30.159
ENSPTRG00000005071	RAB5B	81	33.333	ENSPTRG00000046866	RHEB	93	33.333
ENSPTRG00000005071	RAB5B	55	30.159	ENSPTRG00000043505	-	60	30.159
ENSPTRG00000005071	RAB5B	78	31.765	ENSPTRG00000004731	RERG	84	31.765
ENSPTRG00000005071	RAB5B	78	35.882	ENSPTRG00000048400	-	80	35.882
ENSPTRG00000005071	RAB5B	78	35.882	ENSPTRG00000042083	RAB39B	80	35.882
ENSPTRG00000005071	RAB5B	90	41.176	ENSPTRG00000044358	-	98	40.594
ENSPTRG00000005071	RAB5B	91	31.122	ENSPTRG00000048075	-	98	31.122
ENSPTRG00000005071	RAB5B	90	47.938	ENSPTRG00000044969	RAB22A	98	47.938
ENSPTRG00000005071	RAB5B	81	43.646	ENSPTRG00000044137	RAB6A	85	43.646
ENSPTRG00000005071	RAB5B	82	45.198	ENSPTRG00000003915	RAB1B	89	45.198
ENSPTRG00000005071	RAB5B	89	34.826	ENSPTRG00000028227	RAB9B	97	34.826
ENSPTRG00000005071	RAB5B	77	45.783	ENSPTRG00000048374	RAB6B	80	45.783
ENSPTRG00000005071	RAB5B	74	35.185	ENSPTRG00000014555	-	66	35.185
ENSPTRG00000005071	RAB5B	98	82.547	ENSPTRG00000014682	RAB5A	100	81.481
ENSPTRG00000005071	RAB5B	77	32.335	ENSPTRG00000004775	KRAS	90	31.579
ENSPTRG00000005071	RAB5B	78	42.857	ENSPTRG00000004125	RAB30	83	42.857
ENSPTRG00000005071	RAB5B	100	85.185	ENSPTRG00000009194	RAB5C	100	85.185
ENSPTRG00000005071	RAB5B	89	36.979	ENSPTRG00000001370	RAB13	95	36.979
ENSPTRG00000005071	RAB5B	83	30.556	ENSPTRG00000001140	NRAS	94	32.143
ENSPTRG00000005071	RAB5B	78	43.787	ENSPTRG00000006125	-	93	43.787
ENSPTRG00000005071	RAB5B	75	45.963	ENSPTRG00000001446	RAB25	76	45.963
ENSPTRG00000005071	RAB5B	62	30.986	ENSPTRG00000014572	ARL8B	73	30.986
ENSPTRG00000005071	RAB5B	74	38.125	ENSPTRG00000043341	RAB23	67	38.125
ENSPTRG00000005071	RAB5B	86	35.294	ENSPTRG00000009853	RAB12	77	35.294
ENSPTRG00000005071	RAB5B	89	37.949	ENSPTRG00000005524	RAB35	96	37.949
ENSPTRG00000005071	RAB5B	80	42.222	ENSPTRG00000002384	RAB18	94	39.086

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000005071	RAB5B	97	99.522	ENSG00000111540	RAB5B	100	100.000	Homo_sapiens
ENSPTRG00000005071	RAB5B	97	98.104	ENSAMEG00000003196	RAB5B	100	98.618	Ailuropoda_melanoleuca
ENSPTRG00000005071	RAB5B	98	96.682	ENSACAG00000005380	RAB5B	100	96.279	Anolis_carolinensis
ENSPTRG00000005071	RAB5B	100	99.559	ENSANAG00000033215	RAB5B	100	99.559	Aotus_nancymaae
ENSPTRG00000005071	RAB5B	97	99.043	ENSBTAG00000014129	RAB5B	100	99.535	Bos_taurus
ENSPTRG00000005071	RAB5B	100	99.559	ENSCJAG00000041780	RAB5B	100	99.559	Callithrix_jacchus
ENSPTRG00000005071	RAB5B	97	99.522	ENSCAFG00000000087	RAB5B	100	100.000	Canis_familiaris
ENSPTRG00000005071	RAB5B	97	99.522	ENSCAFG00020026094	RAB5B	100	100.000	Canis_lupus_dingo
ENSPTRG00000005071	RAB5B	99	98.598	ENSCHIG00000010333	RAB5B	99	98.598	Capra_hircus
ENSPTRG00000005071	RAB5B	97	99.043	ENSTSYG00000009576	RAB5B	100	99.535	Carlito_syrichta
ENSPTRG00000005071	RAB5B	97	99.522	ENSCPOG00000034818	RAB5B	100	100.000	Cavia_porcellus
ENSPTRG00000005071	RAB5B	97	98.565	ENSCCAG00000019480	RAB5B	100	99.070	Cebus_capucinus
ENSPTRG00000005071	RAB5B	80	98.844	ENSCATG00000034978	RAB5B	98	99.441	Cercocebus_atys
ENSPTRG00000005071	RAB5B	97	98.565	ENSCSAG00000005277	RAB5B	100	99.070	Chlorocebus_sabaeus
ENSPTRG00000005071	RAB5B	98	96.682	ENSCPBG00000012712	RAB5B	100	96.279	Chrysemys_picta_bellii
ENSPTRG00000005071	RAB5B	97	99.043	ENSCGRG00001000428	Rab5b	100	99.535	Cricetulus_griseus_chok1gshd
ENSPTRG00000005071	RAB5B	97	99.043	ENSCGRG00000009508	-	100	99.535	Cricetulus_griseus_crigri
ENSPTRG00000005071	RAB5B	97	99.522	ENSDORG00000025063	Rab5b	100	100.000	Dipodomys_ordii
ENSPTRG00000005071	RAB5B	97	99.043	ENSECAG00000023306	RAB5B	100	99.535	Equus_caballus
ENSPTRG00000005071	RAB5B	97	98.565	ENSEEUG00000006745	RAB5B	100	99.070	Erinaceus_europaeus
ENSPTRG00000005071	RAB5B	97	99.522	ENSFDAG00000008326	RAB5B	100	100.000	Fukomys_damarensis
ENSPTRG00000005071	RAB5B	97	98.565	ENSHGLG00000005995	RAB5B	100	99.070	Heterocephalus_glaber_female
ENSPTRG00000005071	RAB5B	97	98.565	ENSHGLG00100012955	RAB5B	100	99.070	Heterocephalus_glaber_male
ENSPTRG00000005071	RAB5B	97	98.086	ENSSTOG00000010536	RAB5B	100	98.605	Ictidomys_tridecemlineatus
ENSPTRG00000005071	RAB5B	97	99.043	ENSJJAG00000019506	Rab5b	100	99.535	Jaculus_jaculus
ENSPTRG00000005071	RAB5B	99	99.123	ENSLAFG00000018009	RAB5B	99	99.123	Loxodonta_africana
ENSPTRG00000005071	RAB5B	97	98.565	ENSMFAG00000029992	RAB5B	100	99.070	Macaca_fascicularis
ENSPTRG00000005071	RAB5B	100	98.655	ENSMMUG00000031853	RAB5B	100	99.070	Macaca_mulatta
ENSPTRG00000005071	RAB5B	97	98.565	ENSMNEG00000005338	RAB5B	100	99.070	Macaca_nemestrina
ENSPTRG00000005071	RAB5B	97	98.565	ENSMLEG00000034462	RAB5B	100	99.070	Mandrillus_leucophaeus
ENSPTRG00000005071	RAB5B	97	99.522	ENSMAUG00000011613	Rab5b	100	100.000	Mesocricetus_auratus
ENSPTRG00000005071	RAB5B	97	99.043	ENSMICG00000011086	RAB5B	100	99.535	Microcebus_murinus
ENSPTRG00000005071	RAB5B	97	99.522	ENSMUSG00000000711	Rab5b	100	100.000	Mus_musculus
ENSPTRG00000005071	RAB5B	97	99.522	MGP_PahariEiJ_G0031135	Rab5b	100	100.000	Mus_pahari
ENSPTRG00000005071	RAB5B	97	99.043	MGP_SPRETEiJ_G0016774	Rab5b	100	99.535	Mus_spretus
ENSPTRG00000005071	RAB5B	99	98.246	ENSMPUG00000000946	RAB5B	93	98.246	Mustela_putorius_furo
ENSPTRG00000005071	RAB5B	97	99.522	ENSNLEG00000017570	-	100	100.000	Nomascus_leucogenys
ENSPTRG00000005071	RAB5B	97	99.522	ENSOPRG00000007883	RAB5B	100	100.000	Ochotona_princeps
ENSPTRG00000005071	RAB5B	97	99.522	ENSODEG00000003860	RAB5B	100	99.535	Octodon_degus
ENSPTRG00000005071	RAB5B	100	100.000	ENSOCUG00000013895	RAB5B	100	100.000	Oryctolagus_cuniculus
ENSPTRG00000005071	RAB5B	100	100.000	ENSOARG00000010651	RAB5B	100	100.000	Ovis_aries
ENSPTRG00000005071	RAB5B	100	100.000	ENSPPAG00000035431	RAB5B	100	100.000	Pan_paniscus
ENSPTRG00000005071	RAB5B	97	98.565	ENSPANG00000021075	RAB5B	97	98.131	Papio_anubis
ENSPTRG00000005071	RAB5B	97	99.522	ENSPCOG00000016461	RAB5B	100	100.000	Propithecus_coquereli
ENSPTRG00000005071	RAB5B	97	98.565	ENSRNOG00000006130	Rab5b	100	99.070	Rattus_norvegicus
ENSPTRG00000005071	RAB5B	97	98.565	ENSRBIG00000013165	RAB5B	100	99.070	Rhinopithecus_bieti
ENSPTRG00000005071	RAB5B	97	98.565	ENSRROG00000037973	RAB5B	100	99.070	Rhinopithecus_roxellana
ENSPTRG00000005071	RAB5B	97	82.297	ENSSBOG00000035419	RAB5B	100	83.256	Saimiri_boliviensis_boliviensis
ENSPTRG00000005071	RAB5B	98	98.104	ENSSHAG00000007727	RAB5B	100	98.605	Sarcophilus_harrisii
ENSPTRG00000005071	RAB5B	97	99.522	ENSSARG00000006237	RAB5B	100	100.000	Sorex_araneus
ENSPTRG00000005071	RAB5B	98	96.682	ENSSPUG00000014873	RAB5B	100	96.279	Sphenodon_punctatus
ENSPTRG00000005071	RAB5B	97	99.522	ENSTTRG00000015001	RAB5B	100	100.000	Tursiops_truncatus
ENSPTRG00000005071	RAB5B	97	99.043	ENSUAMG00000014651	RAB5B	100	99.535	Ursus_americanus
ENSPTRG00000005071	RAB5B	97	99.043	ENSUMAG00000016263	RAB5B	100	99.535	Ursus_maritimus
ENSPTRG00000005071	RAB5B	65	99.286	ENSVVUG00000022054	RAB5B	81	100.000	Vulpes_vulpes