EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000005567 (Gene tree)
Gene ID: 473295
Gene Symbol: SETD1B
Alias: -
Full Name: SET domain containing 1B
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 30039 bases
Position: chr12:125185544-125215582
Accession: 5580
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000009452	RRM_1	PF00076.22	3.7e-10	1	1
ENSPTRP00000061948	RRM_1	PF00076.22	3.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000010219	-	5760	-	ENSPTRP00000009452	1919 (aa)	-	H2Q734
ENSPTRT00000089535	-	8663	XM_016924422	ENSPTRP00000061948	1962 (aa)	XP_016779911	A0A2I3RBF6

Gene Model

Click here to download ENSPTRG00000005567's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000005567's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000005567	SETD1B	100	99.339	ENSG00000139718	SETD1B	100	99.339	Homo_sapiens
ENSPTRG00000005567	SETD1B	65	81.679	ENSAMEG00000014455	SETD1B	61	84.615	Ailuropoda_melanoleuca
ENSPTRG00000005567	SETD1B	71	61.300	ENSACIG00000016453	setd1ba	54	48.187	Amphilophus_citrinellus
ENSPTRG00000005567	SETD1B	71	80.805	ENSATEG00000021563	setd1ba	55	80.675	Anabas_testudineus
ENSPTRG00000005567	SETD1B	50	74.237	ENSAPLG00000005217	SETD1B	70	75.357	Anas_platyrhynchos
ENSPTRG00000005567	SETD1B	77	96.889	ENSANAG00000027480	SETD1B	61	93.151	Aotus_nancymaae
ENSPTRG00000005567	SETD1B	58	85.948	ENSCAFG00020016619	SETD1B	57	96.797	Canis_lupus_dingo
ENSPTRG00000005567	SETD1B	72	86.769	ENSCHIG00000013406	SETD1B	55	96.127	Capra_hircus
ENSPTRG00000005567	SETD1B	85	94.828	ENSTSYG00000033777	SETD1B	51	97.727	Carlito_syrichta
ENSPTRG00000005567	SETD1B	100	94.381	ENSCATG00000035803	SETD1B	100	94.283	Cercocebus_atys
ENSPTRG00000005567	SETD1B	89	93.836	ENSCSAG00000002187	SETD1B	98	93.493	Chlorocebus_sabaeus
ENSPTRG00000005567	SETD1B	88	96.350	ENSCANG00000023445	SETD1B	100	96.350	Colobus_angolensis_palliatus
ENSPTRG00000005567	SETD1B	58	97.183	ENSCGRG00000018075	Setd1b	80	96.379	Cricetulus_griseus_crigri
ENSPTRG00000005567	SETD1B	74	82.624	ENSDNOG00000035084	SETD1B	98	80.836	Dasypus_novemcinctus
ENSPTRG00000005567	SETD1B	96	94.838	ENSEASG00005012369	SETD1B	99	94.838	Equus_asinus_asinus
ENSPTRG00000005567	SETD1B	96	94.690	ENSECAG00000006549	SETD1B	96	94.690	Equus_caballus
ENSPTRG00000005567	SETD1B	84	91.806	ENSFDAG00000015120	SETD1B	62	92.381	Fukomys_damarensis
ENSPTRG00000005567	SETD1B	86	56.162	ENSGAFG00000008712	setd1ba	51	81.056	Gambusia_affinis
ENSPTRG00000005567	SETD1B	63	92.574	ENSHGLG00000012063	SETD1B	64	78.290	Heterocephalus_glaber_female
ENSPTRG00000005567	SETD1B	83	57.302	ENSKMAG00000007804	setd1ba	55	63.596	Kryptolebias_marmoratus
ENSPTRG00000005567	SETD1B	94	62.214	ENSLACG00000018379	SETD1B	54	70.323	Latimeria_chalumnae
ENSPTRG00000005567	SETD1B	87	94.671	ENSLAFG00000026518	SETD1B	95	94.671	Loxodonta_africana
ENSPTRG00000005567	SETD1B	100	93.236	ENSMFAG00000030930	SETD1B	100	93.236	Macaca_fascicularis
ENSPTRG00000005567	SETD1B	62	97.277	ENSMMUG00000012842	SETD1B	100	94.402	Macaca_mulatta
ENSPTRG00000005567	SETD1B	100	93.398	ENSMNEG00000014228	SETD1B	100	93.398	Macaca_nemestrina
ENSPTRG00000005567	SETD1B	62	95.710	ENSMLEG00000039573	SETD1B	63	95.627	Mandrillus_leucophaeus
ENSPTRG00000005567	SETD1B	65	62.285	ENSMGAG00000004421	SETD1B	53	72.591	Meleagris_gallopavo
ENSPTRG00000005567	SETD1B	91	51.575	ENSMMOG00000008190	setd1ba	50	81.505	Mola_mola
ENSPTRG00000005567	SETD1B	82	99.185	ENSNLEG00000001254	SETD1B	51	99.178	Nomascus_leucogenys
ENSPTRG00000005567	SETD1B	84	92.919	ENSODEG00000010155	SETD1B	82	93.786	Octodon_degus
ENSPTRG00000005567	SETD1B	95	86.055	ENSOCUG00000017708	SETD1B	98	94.369	Oryctolagus_cuniculus
ENSPTRG00000005567	SETD1B	100	97.402	ENSPPAG00000043308	SETD1B	100	97.402	Pan_paniscus
ENSPTRG00000005567	SETD1B	89	95.568	ENSPPRG00000021041	SETD1B	98	95.616	Panthera_pardus
ENSPTRG00000005567	SETD1B	100	98.222	ENSPANG00000014784	SETD1B	100	98.222	Papio_anubis
ENSPTRG00000005567	SETD1B	87	53.103	ENSPFOG00000019768	setd1ba	50	82.019	Poecilia_formosa
ENSPTRG00000005567	SETD1B	91	52.304	ENSPLAG00000023459	setd1ba	50	83.228	Poecilia_latipinna
ENSPTRG00000005567	SETD1B	91	52.828	ENSPREG00000011589	setd1ba	50	83.228	Poecilia_reticulata
ENSPTRG00000005567	SETD1B	100	94.617	ENSRBIG00000034516	SETD1B	100	94.617	Rhinopithecus_bieti
ENSPTRG00000005567	SETD1B	100	93.852	ENSRROG00000011844	SETD1B	100	93.852	Rhinopithecus_roxellana
ENSPTRG00000005567	SETD1B	72	96.454	ENSSBOG00000033322	SETD1B	100	96.454	Saimiri_boliviensis_boliviensis
ENSPTRG00000005567	SETD1B	55	86.047	ENSSFOG00015004814	SETD1B	66	81.763	Scleropages_formosus
ENSPTRG00000005567	SETD1B	70	60.465	ENSSPUG00000011847	SETD1B	53	66.879	Sphenodon_punctatus
ENSPTRG00000005567	SETD1B	74	90.426	ENSSSCG00000009806	SETD1B	79	95.265	Sus_scrofa
ENSPTRG00000005567	SETD1B	86	56.923	ENSTRUG00000009533	setd1ba	55	83.607	Takifugu_rubripes
ENSPTRG00000005567	SETD1B	57	91.176	ENSUAMG00000008729	SETD1B	52	91.260	Ursus_americanus