EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000005734 (Gene tree)
Gene ID: 104001796
Gene Symbol: POLR1D
Alias: -
Full Name: RNA polymerase I and III subunit D
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 117899 bases
Position: chr13:12330694-12448592
Accession: 13131
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000053601	RNA_pol_L_2	PF13656.6	5.4e-28	1	1
ENSPTRP00000053601	RNA_pol_L	PF01193.24	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000101807	-	129	-	ENSPTRP00000086240	42 (aa)	-	A0A2J8L589
ENSPTRT00000103372	-	387	-	ENSPTRP00000070517	128 (aa)	-	A0A2I3S0P5
ENSPTRT00000107912	-	141	-	ENSPTRP00000090062	46 (aa)	-	A0A2I3TLE5
ENSPTRT00000106919	-	2025	XM_009426781	ENSPTRP00000075037	122 (aa)	XP_009425056	K7C0F2
ENSPTRT00000060269	-	1253	XM_003952374	ENSPTRP00000053601	133 (aa)	XP_003952423	H2RA83

Gene Model

Click here to download ENSPTRG00000005734's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03020	RNA polymerase	KEGG
ptr04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000005734's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000005734	POLR1D	66	34.091	ENSPTRG00000022966	-	73	34.091
ENSPTRG00000005734	POLR1D	77	33.010	ENSPTRG00000019132	-	85	33.010

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000005734	POLR1D	100	100.000	ENSG00000186184	POLR1D	100	100.000	Homo_sapiens
ENSPTRG00000005734	POLR1D	83	67.568	ENSAPOG00000021882	polr1d	98	67.568	Acanthochromis_polyacanthus
ENSPTRG00000005734	POLR1D	94	98.400	ENSAMEG00000019095	POLR1D	100	98.400	Ailuropoda_melanoleuca
ENSPTRG00000005734	POLR1D	75	75.000	ENSACIG00000013328	polr1d	87	75.000	Amphilophus_citrinellus
ENSPTRG00000005734	POLR1D	84	66.964	ENSAOCG00000018500	polr1d	98	66.964	Amphiprion_ocellaris
ENSPTRG00000005734	POLR1D	84	66.071	ENSAPEG00000009489	polr1d	98	66.071	Amphiprion_percula
ENSPTRG00000005734	POLR1D	80	67.290	ENSATEG00000019322	polr1d	94	67.290	Anabas_testudineus
ENSPTRG00000005734	POLR1D	83	65.766	ENSACAG00000015753	POLR1D	96	65.766	Anolis_carolinensis
ENSPTRG00000005734	POLR1D	100	98.496	ENSANAG00000024486	POLR1D	100	98.496	Aotus_nancymaae
ENSPTRG00000005734	POLR1D	77	74.510	ENSACLG00000023805	polr1d	94	71.028	Astatotilapia_calliptera
ENSPTRG00000005734	POLR1D	80	68.868	ENSAMXG00000036118	polr1d	92	68.868	Astyanax_mexicanus
ENSPTRG00000005734	POLR1D	100	94.737	ENSBTAG00000008642	POLR1D	100	94.737	Bos_taurus
ENSPTRG00000005734	POLR1D	100	94.737	ENSBTAG00000033252	-	100	94.737	Bos_taurus
ENSPTRG00000005734	POLR1D	62	37.805	WBGene00010230	rpac-19	57	37.805	Caenorhabditis_elegans
ENSPTRG00000005734	POLR1D	100	97.744	ENSCJAG00000044669	POLR1D	100	97.744	Callithrix_jacchus
ENSPTRG00000005734	POLR1D	100	98.496	ENSCAFG00000006755	POLR1D	100	98.496	Canis_familiaris
ENSPTRG00000005734	POLR1D	100	95.489	ENSCHIG00000021910	POLR1D	100	95.489	Capra_hircus
ENSPTRG00000005734	POLR1D	93	94.355	ENSTSYG00000026817	-	93	94.355	Carlito_syrichta
ENSPTRG00000005734	POLR1D	96	84.615	ENSTSYG00000034852	-	98	84.874	Carlito_syrichta
ENSPTRG00000005734	POLR1D	96	54.688	ENSCAPG00000006058	-	99	54.688	Cavia_aperea
ENSPTRG00000005734	POLR1D	96	55.469	ENSCPOG00000030450	-	99	55.469	Cavia_porcellus
ENSPTRG00000005734	POLR1D	100	96.992	ENSCCAG00000021349	-	100	96.992	Cebus_capucinus
ENSPTRG00000005734	POLR1D	100	78.947	ENSCCAG00000020191	-	100	78.947	Cebus_capucinus
ENSPTRG00000005734	POLR1D	100	87.970	ENSCATG00000022900	-	100	87.970	Cercocebus_atys
ENSPTRG00000005734	POLR1D	100	98.496	ENSCATG00000030710	-	100	98.496	Cercocebus_atys
ENSPTRG00000005734	POLR1D	93	96.774	ENSCLAG00000017623	POLR1D	100	96.774	Chinchilla_lanigera
ENSPTRG00000005734	POLR1D	73	78.351	ENSCPBG00000004719	POLR1D	96	78.351	Chrysemys_picta_bellii
ENSPTRG00000005734	POLR1D	100	95.489	ENSCANG00000037694	-	100	95.489	Colobus_angolensis_palliatus
ENSPTRG00000005734	POLR1D	100	98.496	ENSCANG00000028632	-	100	98.496	Colobus_angolensis_palliatus
ENSPTRG00000005734	POLR1D	100	96.992	ENSCGRG00001021251	Polr1d	100	96.992	Cricetulus_griseus_chok1gshd
ENSPTRG00000005734	POLR1D	100	96.992	ENSCGRG00000011639	Polr1d	100	96.992	Cricetulus_griseus_crigri
ENSPTRG00000005734	POLR1D	78	70.192	ENSCSEG00000018268	polr1d	91	69.159	Cynoglossus_semilaevis
ENSPTRG00000005734	POLR1D	79	71.429	ENSCVAG00000018527	polr1d	92	71.429	Cyprinodon_variegatus
ENSPTRG00000005734	POLR1D	83	66.364	ENSDARG00000037570	polr1d	98	66.364	Danio_rerio
ENSPTRG00000005734	POLR1D	100	96.241	ENSDNOG00000043676	-	100	96.241	Dasypus_novemcinctus
ENSPTRG00000005734	POLR1D	100	94.030	ENSDNOG00000046247	-	100	94.030	Dasypus_novemcinctus
ENSPTRG00000005734	POLR1D	100	95.489	ENSDORG00000029155	Polr1d	100	95.489	Dipodomys_ordii
ENSPTRG00000005734	POLR1D	65	43.023	FBgn0086447	l(2)37Cg	81	43.023	Drosophila_melanogaster
ENSPTRG00000005734	POLR1D	93	90.323	ENSETEG00000012797	POLR1D	100	90.323	Echinops_telfairi
ENSPTRG00000005734	POLR1D	65	72.093	ENSEBUG00000011748	polr1d	60	72.093	Eptatretus_burgeri
ENSPTRG00000005734	POLR1D	96	97.656	ENSEASG00005022487	POLR1D	99	97.656	Equus_asinus_asinus
ENSPTRG00000005734	POLR1D	93	96.774	ENSEEUG00000013144	POLR1D	100	96.774	Erinaceus_europaeus
ENSPTRG00000005734	POLR1D	80	67.925	ENSELUG00000005105	rpac2	93	67.925	Esox_lucius
ENSPTRG00000005734	POLR1D	100	98.496	ENSFCAG00000030162	POLR1D	100	98.496	Felis_catus
ENSPTRG00000005734	POLR1D	72	76.042	ENSFALG00000011463	POLR1D	95	76.042	Ficedula_albicollis
ENSPTRG00000005734	POLR1D	100	96.992	ENSFDAG00000004463	POLR1D	100	96.992	Fukomys_damarensis
ENSPTRG00000005734	POLR1D	82	72.727	ENSFHEG00000015410	polr1d	96	72.727	Fundulus_heteroclitus
ENSPTRG00000005734	POLR1D	79	72.381	ENSGAFG00000001693	polr1d	92	72.381	Gambusia_affinis
ENSPTRG00000005734	POLR1D	88	68.644	ENSGACG00000018585	polr1d	100	68.644	Gasterosteus_aculeatus
ENSPTRG00000005734	POLR1D	81	76.852	ENSGAGG00000008503	POLR1D	95	76.852	Gopherus_agassizii
ENSPTRG00000005734	POLR1D	100	100.000	ENSGGOG00000004235	POLR1D	100	100.000	Gorilla_gorilla
ENSPTRG00000005734	POLR1D	80	71.028	ENSHBUG00000002111	polr1d	94	71.028	Haplochromis_burtoni
ENSPTRG00000005734	POLR1D	100	95.489	ENSHGLG00000003202	POLR1D	100	95.489	Heterocephalus_glaber_female
ENSPTRG00000005734	POLR1D	100	95.489	ENSHGLG00100009393	POLR1D	100	95.489	Heterocephalus_glaber_male
ENSPTRG00000005734	POLR1D	80	69.159	ENSHCOG00000003258	polr1d	94	69.159	Hippocampus_comes
ENSPTRG00000005734	POLR1D	79	73.333	ENSIPUG00000014810	polr1d	91	73.333	Ictalurus_punctatus
ENSPTRG00000005734	POLR1D	100	99.248	ENSSTOG00000013877	POLR1D	100	99.248	Ictidomys_tridecemlineatus
ENSPTRG00000005734	POLR1D	97	90.226	ENSJJAG00000022671	-	100	93.333	Jaculus_jaculus
ENSPTRG00000005734	POLR1D	95	76.190	ENSJJAG00000021667	-	75	76.190	Jaculus_jaculus
ENSPTRG00000005734	POLR1D	80	66.981	ENSKMAG00000015256	polr1d	93	66.981	Kryptolebias_marmoratus
ENSPTRG00000005734	POLR1D	79	72.381	ENSLBEG00000015919	polr1d	92	72.381	Labrus_bergylta
ENSPTRG00000005734	POLR1D	86	66.087	ENSLACG00000006810	POLR1D	95	66.087	Latimeria_chalumnae
ENSPTRG00000005734	POLR1D	54	77.027	ENSLOCG00000014976	polr1d	100	77.027	Lepisosteus_oculatus
ENSPTRG00000005734	POLR1D	100	89.474	ENSLAFG00000032290	POLR1D	100	89.474	Loxodonta_africana
ENSPTRG00000005734	POLR1D	94	98.400	ENSMFAG00000045264	POLR1D	97	98.400	Macaca_fascicularis
ENSPTRG00000005734	POLR1D	100	79.699	ENSMMUG00000041570	-	100	79.699	Macaca_mulatta
ENSPTRG00000005734	POLR1D	87	99.138	ENSMMUG00000020386	POLR1D	100	99.138	Macaca_mulatta
ENSPTRG00000005734	POLR1D	100	99.248	ENSMNEG00000008630	-	100	99.248	Macaca_nemestrina
ENSPTRG00000005734	POLR1D	100	82.707	ENSMNEG00000038120	-	100	82.707	Macaca_nemestrina
ENSPTRG00000005734	POLR1D	100	88.722	ENSMLEG00000032251	-	100	88.722	Mandrillus_leucophaeus
ENSPTRG00000005734	POLR1D	100	99.248	ENSMLEG00000041048	-	100	99.248	Mandrillus_leucophaeus
ENSPTRG00000005734	POLR1D	76	71.287	ENSMAMG00000014834	polr1d	94	71.287	Mastacembelus_armatus
ENSPTRG00000005734	POLR1D	77	74.510	ENSMZEG00005006638	polr1d	90	74.510	Maylandia_zebra
ENSPTRG00000005734	POLR1D	69	78.261	ENSMGAG00000005322	POLR1D	84	78.261	Meleagris_gallopavo
ENSPTRG00000005734	POLR1D	100	96.241	ENSMAUG00000001946	Polr1d	100	96.241	Mesocricetus_auratus
ENSPTRG00000005734	POLR1D	100	96.992	ENSMICG00000016883	-	100	96.992	Microcebus_murinus
ENSPTRG00000005734	POLR1D	99	80.303	ENSMICG00000007349	-	100	80.303	Microcebus_murinus
ENSPTRG00000005734	POLR1D	99	96.212	ENSMOCG00000021288	Polr1d	99	96.212	Microtus_ochrogaster
ENSPTRG00000005734	POLR1D	80	68.224	ENSMMOG00000009605	polr1d	94	68.224	Mola_mola
ENSPTRG00000005734	POLR1D	80	84.906	ENSMODG00000023881	POLR1D	93	84.906	Monodelphis_domestica
ENSPTRG00000005734	POLR1D	80	67.290	ENSMALG00000010652	polr1d	94	67.290	Monopterus_albus
ENSPTRG00000005734	POLR1D	100	90.226	MGP_CAROLIEiJ_G0028034	Polr1d	100	90.226	Mus_caroli
ENSPTRG00000005734	POLR1D	100	90.226	ENSMUSG00000029642	Polr1d	100	90.226	Mus_musculus
ENSPTRG00000005734	POLR1D	100	89.474	MGP_PahariEiJ_G0024600	Polr1d	100	89.474	Mus_pahari
ENSPTRG00000005734	POLR1D	100	90.977	MGP_SPRETEiJ_G0029032	Polr1d	100	90.977	Mus_spretus
ENSPTRG00000005734	POLR1D	99	86.364	ENSMLUG00000004118	-	99	86.364	Myotis_lucifugus
ENSPTRG00000005734	POLR1D	100	96.241	ENSMLUG00000027169	-	100	96.241	Myotis_lucifugus
ENSPTRG00000005734	POLR1D	87	96.552	ENSNGAG00000006014	Polr1d	100	96.552	Nannospalax_galili
ENSPTRG00000005734	POLR1D	80	71.028	ENSNBRG00000020327	polr1d	94	71.028	Neolamprologus_brichardi
ENSPTRG00000005734	POLR1D	100	100.000	ENSNLEG00000000358	POLR1D	100	100.000	Nomascus_leucogenys
ENSPTRG00000005734	POLR1D	100	81.203	ENSODEG00000014801	-	100	81.203	Octodon_degus
ENSPTRG00000005734	POLR1D	100	95.489	ENSODEG00000005294	-	100	95.489	Octodon_degus
ENSPTRG00000005734	POLR1D	79	81.905	ENSOANG00000008708	-	97	81.905	Ornithorhynchus_anatinus
ENSPTRG00000005734	POLR1D	100	96.241	ENSOCUG00000015706	POLR1D	82	96.241	Oryctolagus_cuniculus
ENSPTRG00000005734	POLR1D	80	68.224	ENSORLG00000010257	polr1d	94	68.224	Oryzias_latipes
ENSPTRG00000005734	POLR1D	83	66.667	ENSORLG00020000533	polr1d	75	66.667	Oryzias_latipes_hni
ENSPTRG00000005734	POLR1D	85	67.257	ENSORLG00015013267	polr1d	75	67.257	Oryzias_latipes_hsok
ENSPTRG00000005734	POLR1D	86	66.957	ENSOMEG00000014912	polr1d	77	66.957	Oryzias_melastigma
ENSPTRG00000005734	POLR1D	100	96.992	ENSOGAG00000014601	POLR1D	100	96.992	Otolemur_garnettii
ENSPTRG00000005734	POLR1D	94	95.200	ENSOARG00000017005	POLR1D	96	95.200	Ovis_aries
ENSPTRG00000005734	POLR1D	100	98.496	ENSPPAG00000028138	POLR1D	100	98.496	Pan_paniscus
ENSPTRG00000005734	POLR1D	99	98.485	ENSPPRG00000003381	POLR1D	99	98.485	Panthera_pardus
ENSPTRG00000005734	POLR1D	93	98.387	ENSPTIG00000018137	POLR1D	93	98.387	Panthera_tigris_altaica
ENSPTRG00000005734	POLR1D	100	99.248	ENSPANG00000020259	-	100	99.248	Papio_anubis
ENSPTRG00000005734	POLR1D	100	87.970	ENSPANG00000035051	-	100	87.970	Papio_anubis
ENSPTRG00000005734	POLR1D	86	62.609	ENSPKIG00000021891	polr1d	90	53.097	Paramormyrops_kingsleyae
ENSPTRG00000005734	POLR1D	87	72.650	ENSPSIG00000011822	POLR1D	91	72.650	Pelodiscus_sinensis
ENSPTRG00000005734	POLR1D	84	66.071	ENSPMGG00000010359	polr1d	97	66.071	Periophthalmus_magnuspinnatus
ENSPTRG00000005734	POLR1D	93	56.800	ENSPMGG00000012998	POLR1D	93	56.800	Periophthalmus_magnuspinnatus
ENSPTRG00000005734	POLR1D	100	93.233	ENSPEMG00000006336	-	100	93.233	Peromyscus_maniculatus_bairdii
ENSPTRG00000005734	POLR1D	82	59.633	ENSPMAG00000004228	polr1d	92	59.633	Petromyzon_marinus
ENSPTRG00000005734	POLR1D	80	84.906	ENSPCIG00000001673	POLR1D	93	84.906	Phascolarctos_cinereus
ENSPTRG00000005734	POLR1D	79	72.381	ENSPFOG00000023343	polr1d	92	73.750	Poecilia_formosa
ENSPTRG00000005734	POLR1D	79	72.381	ENSPLAG00000009675	polr1d	92	72.381	Poecilia_latipinna
ENSPTRG00000005734	POLR1D	79	72.381	ENSPMEG00000004628	polr1d	92	72.381	Poecilia_mexicana
ENSPTRG00000005734	POLR1D	79	72.381	ENSPREG00000022032	polr1d	92	72.381	Poecilia_reticulata
ENSPTRG00000005734	POLR1D	100	96.992	ENSPCOG00000028175	POLR1D	100	96.992	Propithecus_coquereli
ENSPTRG00000005734	POLR1D	80	71.028	ENSPNYG00000000107	polr1d	94	71.028	Pundamilia_nyererei
ENSPTRG00000005734	POLR1D	76	68.317	ENSPNAG00000001512	polr1d	87	67.308	Pygocentrus_nattereri
ENSPTRG00000005734	POLR1D	100	95.489	ENSRBIG00000000336	-	100	95.489	Rhinopithecus_bieti
ENSPTRG00000005734	POLR1D	100	99.248	ENSRBIG00000036378	-	100	99.248	Rhinopithecus_bieti
ENSPTRG00000005734	POLR1D	100	95.489	ENSRROG00000026751	-	100	95.489	Rhinopithecus_roxellana
ENSPTRG00000005734	POLR1D	100	99.248	ENSRROG00000042232	-	100	99.248	Rhinopithecus_roxellana
ENSPTRG00000005734	POLR1D	89	45.378	YNL113W	RPC19	84	45.378	Saccharomyces_cerevisiae
ENSPTRG00000005734	POLR1D	100	98.496	ENSSBOG00000028482	-	100	98.496	Saimiri_boliviensis_boliviensis
ENSPTRG00000005734	POLR1D	86	92.105	ENSSBOG00000030146	-	84	92.105	Saimiri_boliviensis_boliviensis
ENSPTRG00000005734	POLR1D	86	78.070	ENSSHAG00000001190	POLR1D	88	78.070	Sarcophilus_harrisii
ENSPTRG00000005734	POLR1D	82	73.394	ENSSFOG00015011375	polr1d	96	73.394	Scleropages_formosus
ENSPTRG00000005734	POLR1D	80	68.224	ENSSMAG00000011861	polr1d	94	68.224	Scophthalmus_maximus
ENSPTRG00000005734	POLR1D	80	67.290	ENSSDUG00000011930	polr1d	94	67.290	Seriola_dumerili
ENSPTRG00000005734	POLR1D	86	63.478	ENSSLDG00000023871	polr1d	97	63.478	Seriola_lalandi_dorsalis
ENSPTRG00000005734	POLR1D	100	96.992	ENSSARG00000007840	POLR1D	100	96.992	Sorex_araneus
ENSPTRG00000005734	POLR1D	79	75.238	ENSSPUG00000005786	POLR1D	95	72.072	Sphenodon_punctatus
ENSPTRG00000005734	POLR1D	79	72.381	ENSSPAG00000011764	polr1d	92	72.381	Stegastes_partitus
ENSPTRG00000005734	POLR1D	100	94.737	ENSSSCG00000009310	POLR1D	100	94.737	Sus_scrofa
ENSPTRG00000005734	POLR1D	72	76.042	ENSTGUG00000005450	POLR1D	100	76.042	Taeniopygia_guttata
ENSPTRG00000005734	POLR1D	78	65.385	ENSTRUG00000019741	polr1d	91	65.385	Takifugu_rubripes
ENSPTRG00000005734	POLR1D	93	95.968	ENSTBEG00000007006	POLR1D	100	95.968	Tupaia_belangeri
ENSPTRG00000005734	POLR1D	100	98.496	ENSUAMG00000011413	POLR1D	100	98.496	Ursus_americanus
ENSPTRG00000005734	POLR1D	93	98.387	ENSUMAG00000016968	POLR1D	97	98.387	Ursus_maritimus
ENSPTRG00000005734	POLR1D	100	98.496	ENSVVUG00000009216	POLR1D	100	98.496	Vulpes_vulpes
ENSPTRG00000005734	POLR1D	74	75.510	ENSXCOG00000011731	polr1d	75	75.510	Xiphophorus_couchianus
ENSPTRG00000005734	POLR1D	74	75.510	ENSXMAG00000017538	polr1d	75	75.510	Xiphophorus_maculatus