EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000005873 (Gene tree)
Gene ID: 452719
Gene Symbol: SETDB2
Alias: -
Full Name: SET domain bifurcated 2
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 50658 bases
Position: chr13:34446622-34497279
Accession: 7303
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000042655	MBD	PF01429.19	1.6e-07	1	1
ENSPTRP00000072284	MBD	PF01429.19	1.6e-07	1	1
ENSPTRP00000076455	MBD	PF01429.19	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000099304	-	6187	XM_009426943	ENSPTRP00000072284	707 (aa)	XP_009425218	A0A2I3S637
ENSPTRT00000103844	-	2160	-	ENSPTRP00000076455	719 (aa)	-	A0A2I3SHU1
ENSPTRT00000048180	-	2160	XM_001153947	ENSPTRP00000042655	719 (aa)	XP_001153947	H2R1P1

Gene Model

Click here to download ENSPTRG00000005873's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr00310	Lysine degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000005873's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000005873	SETDB2	100	99.583	ENSG00000136169	SETDB2	100	99.583	Homo_sapiens
ENSPTRG00000005873	SETDB2	55	56.322	ENSAPOG00000020220	-	86	56.322	Acanthochromis_polyacanthus
ENSPTRG00000005873	SETDB2	98	82.514	ENSAMEG00000003443	SETDB2	69	82.514	Ailuropoda_melanoleuca
ENSPTRG00000005873	SETDB2	71	40.625	ENSACIG00000009349	-	83	40.625	Amphilophus_citrinellus
ENSPTRG00000005873	SETDB2	67	52.874	ENSAOCG00000006560	-	76	52.874	Amphiprion_ocellaris
ENSPTRG00000005873	SETDB2	50	52.874	ENSAPEG00000009529	-	66	52.874	Amphiprion_percula
ENSPTRG00000005873	SETDB2	50	54.023	ENSATEG00000008915	-	79	54.023	Anabas_testudineus
ENSPTRG00000005873	SETDB2	99	47.280	ENSAPLG00000009061	SETDB2	100	47.280	Anas_platyrhynchos
ENSPTRG00000005873	SETDB2	100	45.788	ENSACAG00000014036	SETDB2	100	46.112	Anolis_carolinensis
ENSPTRG00000005873	SETDB2	90	93.407	ENSANAG00000028107	SETDB2	100	93.407	Aotus_nancymaae
ENSPTRG00000005873	SETDB2	76	37.241	ENSACLG00000004046	-	84	37.241	Astatotilapia_calliptera
ENSPTRG00000005873	SETDB2	81	61.628	ENSAMXG00000016092	setdb2	88	61.628	Astyanax_mexicanus
ENSPTRG00000005873	SETDB2	100	78.642	ENSBTAG00000007329	SETDB2	100	78.642	Bos_taurus
ENSPTRG00000005873	SETDB2	100	92.786	ENSCJAG00000008864	SETDB2	100	92.786	Callithrix_jacchus
ENSPTRG00000005873	SETDB2	99	80.140	ENSCAFG00000004341	SETDB2	100	80.140	Canis_familiaris
ENSPTRG00000005873	SETDB2	100	80.932	ENSCAFG00020020283	SETDB2	100	80.932	Canis_lupus_dingo
ENSPTRG00000005873	SETDB2	100	78.642	ENSCHIG00000014895	SETDB2	100	78.642	Capra_hircus
ENSPTRG00000005873	SETDB2	99	84.801	ENSTSYG00000014051	SETDB2	99	84.801	Carlito_syrichta
ENSPTRG00000005873	SETDB2	68	73.706	ENSCAPG00000014168	-	97	73.706	Cavia_aperea
ENSPTRG00000005873	SETDB2	92	75.460	ENSCPOG00000002194	SETDB2	97	75.460	Cavia_porcellus
ENSPTRG00000005873	SETDB2	100	92.362	ENSCCAG00000031604	SETDB2	100	92.362	Cebus_capucinus
ENSPTRG00000005873	SETDB2	100	96.888	ENSCATG00000002055	SETDB2	100	96.888	Cercocebus_atys
ENSPTRG00000005873	SETDB2	100	76.379	ENSCLAG00000007348	SETDB2	100	76.379	Chinchilla_lanigera
ENSPTRG00000005873	SETDB2	100	96.605	ENSCSAG00000017713	SETDB2	100	96.605	Chlorocebus_sabaeus
ENSPTRG00000005873	SETDB2	90	46.049	ENSCPBG00000008524	SETDB2	88	44.608	Chrysemys_picta_bellii
ENSPTRG00000005873	SETDB2	99	92.997	ENSCANG00000033506	SETDB2	100	92.737	Colobus_angolensis_palliatus
ENSPTRG00000005873	SETDB2	100	73.061	ENSCGRG00001011194	Setdb2	100	73.061	Cricetulus_griseus_chok1gshd
ENSPTRG00000005873	SETDB2	100	73.061	ENSCGRG00000000801	Setdb2	100	73.061	Cricetulus_griseus_crigri
ENSPTRG00000005873	SETDB2	69	54.545	ENSCVAG00000004116	-	89	43.885	Cyprinodon_variegatus
ENSPTRG00000005873	SETDB2	60	54.167	ENSDARG00000101462	setdb2	72	54.167	Danio_rerio
ENSPTRG00000005873	SETDB2	100	78.025	ENSDNOG00000033679	SETDB2	100	78.025	Dasypus_novemcinctus
ENSPTRG00000005873	SETDB2	99	71.170	ENSDORG00000026163	Setdb2	100	71.170	Dipodomys_ordii
ENSPTRG00000005873	SETDB2	80	78.704	ENSETEG00000004821	SETDB2	81	78.704	Echinops_telfairi
ENSPTRG00000005873	SETDB2	100	83.593	ENSEASG00005017285	SETDB2	100	83.593	Equus_asinus_asinus
ENSPTRG00000005873	SETDB2	100	83.734	ENSECAG00000020357	SETDB2	100	83.734	Equus_caballus
ENSPTRG00000005873	SETDB2	99	72.230	ENSEEUG00000011247	SETDB2	100	72.230	Erinaceus_europaeus
ENSPTRG00000005873	SETDB2	73	58.140	ENSELUG00000024242	-	79	58.140	Esox_lucius
ENSPTRG00000005873	SETDB2	100	83.027	ENSFCAG00000012034	SETDB2	100	83.027	Felis_catus
ENSPTRG00000005873	SETDB2	99	46.549	ENSFALG00000008379	SETDB2	97	46.549	Ficedula_albicollis
ENSPTRG00000005873	SETDB2	99	76.667	ENSFDAG00000017408	SETDB2	100	76.667	Fukomys_damarensis
ENSPTRG00000005873	SETDB2	99	45.726	ENSGALG00000017006	SETDB2	97	45.726	Gallus_gallus
ENSPTRG00000005873	SETDB2	68	55.172	ENSGAFG00000000077	-	77	55.172	Gambusia_affinis
ENSPTRG00000005873	SETDB2	67	53.659	ENSGACG00000015463	-	76	53.659	Gasterosteus_aculeatus
ENSPTRG00000005873	SETDB2	99	50.138	ENSGAGG00000014099	SETDB2	96	50.138	Gopherus_agassizii
ENSPTRG00000005873	SETDB2	100	99.583	ENSGGOG00000016016	SETDB2	100	99.583	Gorilla_gorilla
ENSPTRG00000005873	SETDB2	76	37.241	ENSHBUG00000001477	-	84	37.241	Haplochromis_burtoni
ENSPTRG00000005873	SETDB2	100	77.793	ENSHGLG00000003820	SETDB2	99	77.793	Heterocephalus_glaber_female
ENSPTRG00000005873	SETDB2	100	77.935	ENSHGLG00100008642	SETDB2	99	77.935	Heterocephalus_glaber_male
ENSPTRG00000005873	SETDB2	74	58.824	ENSIPUG00000011157	setdb2	86	58.824	Ictalurus_punctatus
ENSPTRG00000005873	SETDB2	100	80.481	ENSSTOG00000002985	SETDB2	100	80.481	Ictidomys_tridecemlineatus
ENSPTRG00000005873	SETDB2	99	71.489	ENSJJAG00000011079	Setdb2	99	71.489	Jaculus_jaculus
ENSPTRG00000005873	SETDB2	62	62.500	ENSKMAG00000012100	-	82	62.500	Kryptolebias_marmoratus
ENSPTRG00000005873	SETDB2	100	38.940	ENSLACG00000009640	SETDB2	99	37.810	Latimeria_chalumnae
ENSPTRG00000005873	SETDB2	98	35.368	ENSLOCG00000009739	-	96	35.408	Lepisosteus_oculatus
ENSPTRG00000005873	SETDB2	99	78.611	ENSLAFG00000012612	SETDB2	100	78.611	Loxodonta_africana
ENSPTRG00000005873	SETDB2	100	96.747	ENSMFAG00000032631	SETDB2	100	96.747	Macaca_fascicularis
ENSPTRG00000005873	SETDB2	100	96.747	ENSMMUG00000013473	SETDB2	100	96.747	Macaca_mulatta
ENSPTRG00000005873	SETDB2	100	96.747	ENSMNEG00000037148	SETDB2	100	96.747	Macaca_nemestrina
ENSPTRG00000005873	SETDB2	100	96.888	ENSMLEG00000043613	SETDB2	100	96.888	Mandrillus_leucophaeus
ENSPTRG00000005873	SETDB2	73	46.825	ENSMAMG00000022781	-	80	46.825	Mastacembelus_armatus
ENSPTRG00000005873	SETDB2	76	37.241	ENSMZEG00005012098	-	84	37.241	Maylandia_zebra
ENSPTRG00000005873	SETDB2	99	45.342	ENSMGAG00000015017	SETDB2	99	45.342	Meleagris_gallopavo
ENSPTRG00000005873	SETDB2	100	71.751	ENSMAUG00000012871	Setdb2	100	71.751	Mesocricetus_auratus
ENSPTRG00000005873	SETDB2	100	85.149	ENSMICG00000012641	SETDB2	100	85.149	Microcebus_murinus
ENSPTRG00000005873	SETDB2	100	68.927	ENSMOCG00000021987	Setdb2	100	68.927	Microtus_ochrogaster
ENSPTRG00000005873	SETDB2	59	34.731	ENSMMOG00000013334	-	95	34.857	Mola_mola
ENSPTRG00000005873	SETDB2	100	54.039	ENSMODG00000010929	SETDB2	100	53.900	Monodelphis_domestica
ENSPTRG00000005873	SETDB2	68	54.118	ENSMALG00000001256	-	73	54.118	Monopterus_albus
ENSPTRG00000005873	SETDB2	100	67.232	MGP_CAROLIEiJ_G0019367	Setdb2	100	67.232	Mus_caroli
ENSPTRG00000005873	SETDB2	100	67.514	ENSMUSG00000071350	Setdb2	100	67.514	Mus_musculus
ENSPTRG00000005873	SETDB2	100	68.644	MGP_PahariEiJ_G0030385	Setdb2	100	68.644	Mus_pahari
ENSPTRG00000005873	SETDB2	100	67.655	MGP_SPRETEiJ_G0020259	Setdb2	100	67.655	Mus_spretus
ENSPTRG00000005873	SETDB2	99	80.484	ENSMPUG00000018019	SETDB2	99	80.484	Mustela_putorius_furo
ENSPTRG00000005873	SETDB2	99	78.348	ENSMLUG00000004378	SETDB2	99	78.348	Myotis_lucifugus
ENSPTRG00000005873	SETDB2	100	75.955	ENSNGAG00000013911	Setdb2	100	75.955	Nannospalax_galili
ENSPTRG00000005873	SETDB2	100	98.470	ENSNLEG00000003613	SETDB2	100	98.470	Nomascus_leucogenys
ENSPTRG00000005873	SETDB2	94	47.291	ENSMEUG00000005220	-	100	48.159	Notamacropus_eugenii
ENSPTRG00000005873	SETDB2	83	77.937	ENSOPRG00000012261	SETDB2	83	77.937	Ochotona_princeps
ENSPTRG00000005873	SETDB2	70	43.478	ENSONIG00000009000	-	85	43.478	Oreochromis_niloticus
ENSPTRG00000005873	SETDB2	99	54.944	ENSOANG00000015546	SETDB2	93	55.618	Ornithorhynchus_anatinus
ENSPTRG00000005873	SETDB2	100	79.144	ENSOCUG00000003755	SETDB2	100	79.144	Oryctolagus_cuniculus
ENSPTRG00000005873	SETDB2	68	52.273	ENSORLG00000001147	-	76	52.273	Oryzias_latipes
ENSPTRG00000005873	SETDB2	70	52.273	ENSORLG00020006680	-	81	52.273	Oryzias_latipes_hni
ENSPTRG00000005873	SETDB2	68	52.273	ENSORLG00015009952	-	77	52.500	Oryzias_latipes_hsok
ENSPTRG00000005873	SETDB2	99	80.085	ENSOGAG00000005339	SETDB2	99	80.085	Otolemur_garnettii
ENSPTRG00000005873	SETDB2	100	78.925	ENSOARG00000008487	SETDB2	100	78.925	Ovis_aries
ENSPTRG00000005873	SETDB2	100	99.861	ENSPPAG00000039854	SETDB2	100	99.861	Pan_paniscus
ENSPTRG00000005873	SETDB2	100	82.744	ENSPPRG00000000069	SETDB2	100	82.744	Panthera_pardus
ENSPTRG00000005873	SETDB2	100	82.744	ENSPTIG00000006314	SETDB2	100	82.744	Panthera_tigris_altaica
ENSPTRG00000005873	SETDB2	100	96.747	ENSPANG00000017051	SETDB2	100	96.747	Papio_anubis
ENSPTRG00000005873	SETDB2	73	61.628	ENSPKIG00000009795	-	83	61.628	Paramormyrops_kingsleyae
ENSPTRG00000005873	SETDB2	99	47.446	ENSPSIG00000002200	SETDB2	95	47.446	Pelodiscus_sinensis
ENSPTRG00000005873	SETDB2	100	55.230	ENSPCIG00000002912	SETDB2	100	55.230	Phascolarctos_cinereus
ENSPTRG00000005873	SETDB2	74	44.444	ENSPFOG00000006673	-	85	44.444	Poecilia_formosa
ENSPTRG00000005873	SETDB2	74	45.185	ENSPLAG00000016914	-	85	45.185	Poecilia_latipinna
ENSPTRG00000005873	SETDB2	74	45.185	ENSPMEG00000003842	-	85	45.185	Poecilia_mexicana
ENSPTRG00000005873	SETDB2	74	42.963	ENSPREG00000022531	-	85	42.963	Poecilia_reticulata
ENSPTRG00000005873	SETDB2	100	98.020	ENSPPYG00000005368	SETDB2	100	98.020	Pongo_abelii
ENSPTRG00000005873	SETDB2	59	91.176	ENSPCAG00000010230	-	58	91.176	Procavia_capensis
ENSPTRG00000005873	SETDB2	93	86.061	ENSPCOG00000017644	SETDB2	99	86.061	Propithecus_coquereli
ENSPTRG00000005873	SETDB2	100	76.912	ENSPVAG00000006911	SETDB2	100	76.912	Pteropus_vampyrus
ENSPTRG00000005873	SETDB2	55	42.647	ENSPNYG00000023676	-	74	42.647	Pundamilia_nyererei
ENSPTRG00000005873	SETDB2	73	60.000	ENSPNAG00000011459	setdb2	99	32.046	Pygocentrus_nattereri
ENSPTRG00000005873	SETDB2	100	67.893	ENSRNOG00000021680	Setdb2	100	67.893	Rattus_norvegicus
ENSPTRG00000005873	SETDB2	100	97.454	ENSRBIG00000006562	SETDB2	100	97.454	Rhinopithecus_bieti
ENSPTRG00000005873	SETDB2	100	97.313	ENSRROG00000032499	SETDB2	100	97.313	Rhinopithecus_roxellana
ENSPTRG00000005873	SETDB2	100	92.362	ENSSBOG00000023249	SETDB2	100	92.362	Saimiri_boliviensis_boliviensis
ENSPTRG00000005873	SETDB2	100	55.292	ENSSHAG00000007281	SETDB2	100	55.432	Sarcophilus_harrisii
ENSPTRG00000005873	SETDB2	76	40.123	ENSSFOG00015008204	-	90	40.123	Scleropages_formosus
ENSPTRG00000005873	SETDB2	68	52.874	ENSSDUG00000002987	-	74	52.874	Seriola_dumerili
ENSPTRG00000005873	SETDB2	68	54.023	ENSSLDG00000015081	-	73	54.023	Seriola_lalandi_dorsalis
ENSPTRG00000005873	SETDB2	100	72.316	ENSSARG00000009926	SETDB2	100	72.316	Sorex_araneus
ENSPTRG00000005873	SETDB2	66	53.247	ENSSPAG00000006869	-	81	53.247	Stegastes_partitus
ENSPTRG00000005873	SETDB2	100	80.905	ENSSSCG00000009395	SETDB2	100	80.905	Sus_scrofa
ENSPTRG00000005873	SETDB2	52	51.337	ENSTGUG00000012159	SETDB2	92	51.337	Taeniopygia_guttata
ENSPTRG00000005873	SETDB2	86	92.308	ENSTBEG00000008013	SETDB2	90	92.308	Tupaia_belangeri
ENSPTRG00000005873	SETDB2	100	78.784	ENSTTRG00000012932	SETDB2	100	78.784	Tursiops_truncatus
ENSPTRG00000005873	SETDB2	100	82.320	ENSUMAG00000018406	SETDB2	100	82.320	Ursus_maritimus
ENSPTRG00000005873	SETDB2	100	77.388	ENSVPAG00000012019	SETDB2	100	77.388	Vicugna_pacos
ENSPTRG00000005873	SETDB2	84	77.815	ENSVVUG00000028174	SETDB2	91	77.815	Vulpes_vulpes
ENSPTRG00000005873	SETDB2	82	66.279	ENSXETG00000015666	setdb2	96	40.268	Xenopus_tropicalis
ENSPTRG00000005873	SETDB2	55	44.030	ENSXMAG00000006323	-	69	44.030	Xiphophorus_maculatus