EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000005886 (Gene tree)
Gene ID: 452726
Gene Symbol: RNASEH2B
Alias: -
Full Name: ribonuclease H2 subunit B
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 59384 bases
Position: chr13:35964682-36024065
Accession: 5101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000092066	RNase_H2-Ydr279	PF09468.10	2.6e-14	1	1
ENSPTRP00000085156	RNase_H2-Ydr279	PF09468.10	3e-14	1	1
ENSPTRP00000068149	RNase_H2-Ydr279	PF09468.10	3.9e-14	1	1
ENSPTRP00000044596	RNase_H2-Ydr279	PF09468.10	4.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000049457	-	1684	XM_009426975	ENSPTRP00000044596	285 (aa)	XP_009425250	H2R2X9
ENSPTRT00000081966	-	5037	XM_001158221	ENSPTRP00000085156	315 (aa)	XP_001158221	K7DDV4
ENSPTRT00000100286	-	1679	XM_001158160	ENSPTRP00000092066	257 (aa)	XP_001158160	K7CBM1
ENSPTRT00000087060	-	4639	XM_009426981	ENSPTRP00000068149	261 (aa)	XP_009425256	A0A2I3RTU5

Gene Model

Click here to download ENSPTRG00000005886's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000005886's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000005886	RNASEH2B	100	99.611	ENSG00000136104	RNASEH2B	100	100.000	Homo_sapiens
ENSPTRG00000005886	RNASEH2B	95	54.618	ENSAPOG00000010496	rnaseh2b	90	51.429	Acanthochromis_polyacanthus
ENSPTRG00000005886	RNASEH2B	97	89.892	ENSAMEG00000012040	RNASEH2B	99	89.041	Ailuropoda_melanoleuca
ENSPTRG00000005886	RNASEH2B	95	47.984	ENSACIG00000021991	rnaseh2b	98	44.878	Amphilophus_citrinellus
ENSPTRG00000005886	RNASEH2B	95	53.815	ENSAOCG00000013398	rnaseh2b	87	51.661	Amphiprion_ocellaris
ENSPTRG00000005886	RNASEH2B	95	53.815	ENSAPEG00000006033	rnaseh2b	87	51.661	Amphiprion_percula
ENSPTRG00000005886	RNASEH2B	96	55.159	ENSATEG00000008370	rnaseh2b	87	53.875	Anabas_testudineus
ENSPTRG00000005886	RNASEH2B	91	67.227	ENSAPLG00000008955	RNASEH2B	99	65.074	Anas_platyrhynchos
ENSPTRG00000005886	RNASEH2B	97	61.265	ENSACAG00000011679	RNASEH2B	98	58.362	Anolis_carolinensis
ENSPTRG00000005886	RNASEH2B	100	94.553	ENSANAG00000020662	RNASEH2B	100	94.553	Aotus_nancymaae
ENSPTRG00000005886	RNASEH2B	95	53.629	ENSACLG00000000467	rnaseh2b	88	51.103	Astatotilapia_calliptera
ENSPTRG00000005886	RNASEH2B	96	54.582	ENSAMXG00000014351	rnaseh2b	91	53.191	Astyanax_mexicanus
ENSPTRG00000005886	RNASEH2B	98	84.342	ENSBTAG00000020149	RNASEH2B	99	82.958	Bos_taurus
ENSPTRG00000005886	RNASEH2B	96	92.308	ENSCJAG00000003822	-	92	92.400	Callithrix_jacchus
ENSPTRG00000005886	RNASEH2B	100	96.109	ENSCJAG00000008585	-	100	96.109	Callithrix_jacchus
ENSPTRG00000005886	RNASEH2B	98	85.252	ENSCAFG00000004295	RNASEH2B	97	82.550	Canis_familiaris
ENSPTRG00000005886	RNASEH2B	98	85.252	ENSCAFG00020000250	RNASEH2B	99	83.882	Canis_lupus_dingo
ENSPTRG00000005886	RNASEH2B	98	85.612	ENSCHIG00000018220	RNASEH2B	99	84.416	Capra_hircus
ENSPTRG00000005886	RNASEH2B	93	72.951	ENSCHIG00000012982	-	85	72.951	Capra_hircus
ENSPTRG00000005886	RNASEH2B	98	90.288	ENSTSYG00000009176	-	94	89.347	Carlito_syrichta
ENSPTRG00000005886	RNASEH2B	96	76.727	ENSTSYG00000031177	-	98	76.412	Carlito_syrichta
ENSPTRG00000005886	RNASEH2B	98	77.143	ENSCAPG00000009978	RNASEH2B	96	78.125	Cavia_aperea
ENSPTRG00000005886	RNASEH2B	98	83.871	ENSCPOG00000032527	RNASEH2B	100	83.658	Cavia_porcellus
ENSPTRG00000005886	RNASEH2B	100	96.498	ENSCCAG00000026979	RNASEH2B	100	96.498	Cebus_capucinus
ENSPTRG00000005886	RNASEH2B	96	96.356	ENSCATG00000031336	RNASEH2B	84	95.987	Cercocebus_atys
ENSPTRG00000005886	RNASEH2B	97	86.561	ENSCLAG00000003517	RNASEH2B	80	84.407	Chinchilla_lanigera
ENSPTRG00000005886	RNASEH2B	96	97.010	ENSCSAG00000017701	RNASEH2B	91	97.010	Chlorocebus_sabaeus
ENSPTRG00000005886	RNASEH2B	98	71.942	ENSCHOG00000013688	RNASEH2B	98	71.053	Choloepus_hoffmanni
ENSPTRG00000005886	RNASEH2B	95	64.800	ENSCPBG00000008684	RNASEH2B	90	61.356	Chrysemys_picta_bellii
ENSPTRG00000005886	RNASEH2B	98	36.949	ENSCING00000016454	-	96	36.893	Ciona_intestinalis
ENSPTRG00000005886	RNASEH2B	100	97.276	ENSCANG00000041511	-	100	97.276	Colobus_angolensis_palliatus
ENSPTRG00000005886	RNASEH2B	97	84.585	ENSCGRG00001000611	Rnaseh2b	99	82.736	Cricetulus_griseus_chok1gshd
ENSPTRG00000005886	RNASEH2B	97	84.585	ENSCGRG00000006077	Rnaseh2b	99	82.736	Cricetulus_griseus_crigri
ENSPTRG00000005886	RNASEH2B	97	53.360	ENSCSEG00000004910	rnaseh2b	91	51.711	Cynoglossus_semilaevis
ENSPTRG00000005886	RNASEH2B	95	52.209	ENSCVAG00000005212	rnaseh2b	87	51.292	Cyprinodon_variegatus
ENSPTRG00000005886	RNASEH2B	95	53.785	ENSDARG00000005128	rnaseh2b	94	49.488	Danio_rerio
ENSPTRG00000005886	RNASEH2B	98	76.978	ENSDNOG00000034290	-	99	74.675	Dasypus_novemcinctus
ENSPTRG00000005886	RNASEH2B	97	75.451	ENSDNOG00000049666	-	92	75.439	Dasypus_novemcinctus
ENSPTRG00000005886	RNASEH2B	98	86.691	ENSDORG00000010708	Rnaseh2b	99	85.714	Dipodomys_ordii
ENSPTRG00000005886	RNASEH2B	94	31.408	FBgn0030507	CG11164	79	31.408	Drosophila_melanogaster
ENSPTRG00000005886	RNASEH2B	94	39.431	ENSEBUG00000005965	rnaseh2b	97	40.310	Eptatretus_burgeri
ENSPTRG00000005886	RNASEH2B	98	90.647	ENSEASG00005017323	RNASEH2B	99	88.961	Equus_asinus_asinus
ENSPTRG00000005886	RNASEH2B	98	90.288	ENSECAG00000014262	RNASEH2B	99	88.636	Equus_caballus
ENSPTRG00000005886	RNASEH2B	95	52.191	ENSELUG00000019560	rnaseh2b	93	48.123	Esox_lucius
ENSPTRG00000005886	RNASEH2B	94	89.591	ENSFCAG00000014257	RNASEH2B	92	88.136	Felis_catus
ENSPTRG00000005886	RNASEH2B	95	63.200	ENSFALG00000008435	RNASEH2B	91	62.132	Ficedula_albicollis
ENSPTRG00000005886	RNASEH2B	98	85.971	ENSFDAG00000009920	RNASEH2B	99	86.364	Fukomys_damarensis
ENSPTRG00000005886	RNASEH2B	95	54.618	ENSFHEG00000012160	rnaseh2b	87	52.768	Fundulus_heteroclitus
ENSPTRG00000005886	RNASEH2B	95	50.588	ENSGMOG00000016830	rnaseh2b	91	49.624	Gadus_morhua
ENSPTRG00000005886	RNASEH2B	91	65.690	ENSGALG00000017015	RNASEH2B	96	61.204	Gallus_gallus
ENSPTRG00000005886	RNASEH2B	95	53.414	ENSGAFG00000021222	rnaseh2b	87	52.030	Gambusia_affinis
ENSPTRG00000005886	RNASEH2B	95	52.549	ENSGACG00000002821	rnaseh2b	88	50.542	Gasterosteus_aculeatus
ENSPTRG00000005886	RNASEH2B	95	64.400	ENSGAGG00000014722	RNASEH2B	97	62.909	Gopherus_agassizii
ENSPTRG00000005886	RNASEH2B	100	99.222	ENSGGOG00000001044	RNASEH2B	100	99.222	Gorilla_gorilla
ENSPTRG00000005886	RNASEH2B	95	54.032	ENSHBUG00000006049	rnaseh2b	89	51.923	Haplochromis_burtoni
ENSPTRG00000005886	RNASEH2B	98	88.129	ENSHGLG00100015953	RNASEH2B	97	88.502	Heterocephalus_glaber_male
ENSPTRG00000005886	RNASEH2B	95	51.210	ENSHCOG00000003318	rnaseh2b	86	51.210	Hippocampus_comes
ENSPTRG00000005886	RNASEH2B	96	53.386	ENSIPUG00000023815	rnaseh2b	88	52.015	Ictalurus_punctatus
ENSPTRG00000005886	RNASEH2B	97	88.448	ENSSTOG00000015126	RNASEH2B	97	88.462	Ictidomys_tridecemlineatus
ENSPTRG00000005886	RNASEH2B	100	84.912	ENSJJAG00000013335	Rnaseh2b	99	83.721	Jaculus_jaculus
ENSPTRG00000005886	RNASEH2B	95	54.618	ENSKMAG00000002198	rnaseh2b	87	52.768	Kryptolebias_marmoratus
ENSPTRG00000005886	RNASEH2B	96	56.349	ENSLBEG00000019331	rnaseh2b	88	54.380	Labrus_bergylta
ENSPTRG00000005886	RNASEH2B	87	61.304	ENSLACG00000010782	RNASEH2B	92	61.304	Latimeria_chalumnae
ENSPTRG00000005886	RNASEH2B	95	56.627	ENSLOCG00000009296	rnaseh2b	95	53.220	Lepisosteus_oculatus
ENSPTRG00000005886	RNASEH2B	99	82.979	ENSLAFG00000030158	RNASEH2B	95	82.215	Loxodonta_africana
ENSPTRG00000005886	RNASEH2B	97	96.743	ENSMFAG00000038464	-	98	96.743	Macaca_fascicularis
ENSPTRG00000005886	RNASEH2B	100	96.498	ENSMMUG00000021746	RNASEH2B	100	96.498	Macaca_mulatta
ENSPTRG00000005886	RNASEH2B	97	96.743	ENSMNEG00000030580	RNASEH2B	98	96.743	Macaca_nemestrina
ENSPTRG00000005886	RNASEH2B	100	97.665	ENSMLEG00000043911	-	100	97.665	Mandrillus_leucophaeus
ENSPTRG00000005886	RNASEH2B	95	55.823	ENSMAMG00000017109	rnaseh2b	87	53.506	Mastacembelus_armatus
ENSPTRG00000005886	RNASEH2B	95	53.629	ENSMZEG00005021926	rnaseh2b	87	50.746	Maylandia_zebra
ENSPTRG00000005886	RNASEH2B	91	64.854	ENSMGAG00000015025	RNASEH2B	99	61.672	Meleagris_gallopavo
ENSPTRG00000005886	RNASEH2B	97	83.794	ENSMAUG00000016520	Rnaseh2b	99	80.782	Mesocricetus_auratus
ENSPTRG00000005886	RNASEH2B	97	90.975	ENSMICG00000000528	RNASEH2B	99	90.554	Microcebus_murinus
ENSPTRG00000005886	RNASEH2B	95	54.618	ENSMMOG00000019799	rnaseh2b	93	52.768	Mola_mola
ENSPTRG00000005886	RNASEH2B	95	70.800	ENSMODG00000010775	RNASEH2B	96	66.330	Monodelphis_domestica
ENSPTRG00000005886	RNASEH2B	95	54.217	ENSMALG00000004463	rnaseh2b	88	52.030	Monopterus_albus
ENSPTRG00000005886	RNASEH2B	87	82.895	MGP_CAROLIEiJ_G0019389	Rnaseh2b	99	70.455	Mus_caroli
ENSPTRG00000005886	RNASEH2B	97	84.980	ENSMUSG00000021932	Rnaseh2b	99	81.494	Mus_musculus
ENSPTRG00000005886	RNASEH2B	97	66.087	MGP_PahariEiJ_G0030407	-	99	66.087	Mus_pahari
ENSPTRG00000005886	RNASEH2B	92	87.288	ENSMPUG00000018010	RNASEH2B	98	87.288	Mustela_putorius_furo
ENSPTRG00000005886	RNASEH2B	98	88.849	ENSMLUG00000004065	-	99	87.987	Myotis_lucifugus
ENSPTRG00000005886	RNASEH2B	95	53.226	ENSNBRG00000003253	rnaseh2b	89	50.183	Neolamprologus_brichardi
ENSPTRG00000005886	RNASEH2B	100	98.444	ENSNLEG00000003804	RNASEH2B	100	98.444	Nomascus_leucogenys
ENSPTRG00000005886	RNASEH2B	97	71.429	ENSMEUG00000003665	RNASEH2B	98	68.662	Notamacropus_eugenii
ENSPTRG00000005886	RNASEH2B	98	64.981	ENSOPRG00000003695	-	81	65.370	Ochotona_princeps
ENSPTRG00000005886	RNASEH2B	84	80.365	ENSODEG00000005412	-	95	77.366	Octodon_degus
ENSPTRG00000005886	RNASEH2B	98	85.252	ENSODEG00000006793	-	99	83.442	Octodon_degus
ENSPTRG00000005886	RNASEH2B	95	51.190	ENSONIG00000006657	rnaseh2b	88	50.368	Oreochromis_niloticus
ENSPTRG00000005886	RNASEH2B	95	70.916	ENSOANG00000015537	RNASEH2B	99	68.182	Ornithorhynchus_anatinus
ENSPTRG00000005886	RNASEH2B	98	87.050	ENSOCUG00000008904	RNASEH2B	96	86.364	Oryctolagus_cuniculus
ENSPTRG00000005886	RNASEH2B	95	54.400	ENSORLG00000011850	rnaseh2b	95	50.172	Oryzias_latipes
ENSPTRG00000005886	RNASEH2B	95	55.200	ENSORLG00020012081	rnaseh2b	95	50.859	Oryzias_latipes_hni
ENSPTRG00000005886	RNASEH2B	95	55.200	ENSORLG00015015468	rnaseh2b	95	50.859	Oryzias_latipes_hsok
ENSPTRG00000005886	RNASEH2B	95	52.800	ENSOMEG00000012441	rnaseh2b	95	49.141	Oryzias_melastigma
ENSPTRG00000005886	RNASEH2B	99	88.256	ENSOGAG00000016486	RNASEH2B	99	87.205	Otolemur_garnettii
ENSPTRG00000005886	RNASEH2B	100	84.291	ENSOARG00000008701	RNASEH2B	100	83.612	Ovis_aries
ENSPTRG00000005886	RNASEH2B	98	99.281	ENSPPAG00000026374	RNASEH2B	100	99.119	Pan_paniscus
ENSPTRG00000005886	RNASEH2B	98	89.606	ENSPPRG00000012450	RNASEH2B	100	87.908	Panthera_pardus
ENSPTRG00000005886	RNASEH2B	98	89.964	ENSPTIG00000013918	RNASEH2B	100	89.643	Panthera_tigris_altaica
ENSPTRG00000005886	RNASEH2B	100	96.887	ENSPANG00000022424	-	100	96.887	Papio_anubis
ENSPTRG00000005886	RNASEH2B	95	52.209	ENSPKIG00000013386	rnaseh2b	99	46.906	Paramormyrops_kingsleyae
ENSPTRG00000005886	RNASEH2B	73	58.201	ENSPSIG00000002224	RNASEH2B	86	58.201	Pelodiscus_sinensis
ENSPTRG00000005886	RNASEH2B	78	53.659	ENSPMGG00000010299	rnaseh2b	98	53.659	Periophthalmus_magnuspinnatus
ENSPTRG00000005886	RNASEH2B	97	86.166	ENSPEMG00000019721	Rnaseh2b	99	84.365	Peromyscus_maniculatus_bairdii
ENSPTRG00000005886	RNASEH2B	90	66.525	ENSPCIG00000014535	-	94	61.972	Phascolarctos_cinereus
ENSPTRG00000005886	RNASEH2B	95	54.183	ENSPFOG00000016722	rnaseh2b	87	53.114	Poecilia_formosa
ENSPTRG00000005886	RNASEH2B	95	54.618	ENSPLAG00000011755	rnaseh2b	87	53.506	Poecilia_latipinna
ENSPTRG00000005886	RNASEH2B	95	54.618	ENSPMEG00000002721	rnaseh2b	87	53.506	Poecilia_mexicana
ENSPTRG00000005886	RNASEH2B	95	54.618	ENSPREG00000007737	rnaseh2b	87	53.506	Poecilia_reticulata
ENSPTRG00000005886	RNASEH2B	98	99.281	ENSPPYG00000005378	RNASEH2B	99	99.026	Pongo_abelii
ENSPTRG00000005886	RNASEH2B	100	90.661	ENSPCOG00000026623	RNASEH2B	99	92.182	Propithecus_coquereli
ENSPTRG00000005886	RNASEH2B	88	87.611	ENSPVAG00000000508	RNASEH2B	95	88.142	Pteropus_vampyrus
ENSPTRG00000005886	RNASEH2B	95	54.032	ENSPNYG00000013552	rnaseh2b	89	51.923	Pundamilia_nyererei
ENSPTRG00000005886	RNASEH2B	96	51.587	ENSPNAG00000024825	rnaseh2b	88	51.282	Pygocentrus_nattereri
ENSPTRG00000005886	RNASEH2B	97	84.127	ENSRNOG00000009192	Rnaseh2b	99	81.433	Rattus_norvegicus
ENSPTRG00000005886	RNASEH2B	95	83.824	ENSRBIG00000036017	-	97	79.470	Rhinopithecus_bieti
ENSPTRG00000005886	RNASEH2B	100	95.720	ENSRBIG00000028928	-	100	95.720	Rhinopithecus_bieti
ENSPTRG00000005886	RNASEH2B	96	76.016	ENSRROG00000044915	-	92	75.600	Rhinopithecus_roxellana
ENSPTRG00000005886	RNASEH2B	100	96.887	ENSRROG00000018808	-	100	96.887	Rhinopithecus_roxellana
ENSPTRG00000005886	RNASEH2B	100	95.331	ENSSBOG00000008081	RNASEH2B	100	95.331	Saimiri_boliviensis_boliviensis
ENSPTRG00000005886	RNASEH2B	95	71.600	ENSSHAG00000016190	RNASEH2B	96	67.003	Sarcophilus_harrisii
ENSPTRG00000005886	RNASEH2B	95	54.618	ENSSFOG00015010190	rnaseh2b	91	51.418	Scleropages_formosus
ENSPTRG00000005886	RNASEH2B	95	54.217	ENSSMAG00000001546	rnaseh2b	87	52.030	Scophthalmus_maximus
ENSPTRG00000005886	RNASEH2B	95	55.422	ENSSDUG00000007567	rnaseh2b	87	53.137	Seriola_dumerili
ENSPTRG00000005886	RNASEH2B	95	55.823	ENSSLDG00000012485	rnaseh2b	92	50.890	Seriola_lalandi_dorsalis
ENSPTRG00000005886	RNASEH2B	95	62.948	ENSSPUG00000006745	-	94	62.264	Sphenodon_punctatus
ENSPTRG00000005886	RNASEH2B	95	55.020	ENSSPAG00000020926	rnaseh2b	87	52.768	Stegastes_partitus
ENSPTRG00000005886	RNASEH2B	98	88.129	ENSSSCG00000024385	RNASEH2B	99	88.129	Sus_scrofa
ENSPTRG00000005886	RNASEH2B	95	63.600	ENSTGUG00000012104	RNASEH2B	99	62.500	Taeniopygia_guttata
ENSPTRG00000005886	RNASEH2B	97	55.118	ENSTRUG00000015098	rnaseh2b	87	53.875	Takifugu_rubripes
ENSPTRG00000005886	RNASEH2B	95	54.183	ENSTNIG00000013861	rnaseh2b	87	52.381	Tetraodon_nigroviridis
ENSPTRG00000005886	RNASEH2B	98	81.295	ENSTTRG00000010761	RNASEH2B	98	78.896	Tursiops_truncatus
ENSPTRG00000005886	RNASEH2B	97	89.531	ENSUAMG00000022849	RNASEH2B	99	89.531	Ursus_americanus
ENSPTRG00000005886	RNASEH2B	97	88.538	ENSUMAG00000018556	RNASEH2B	99	88.448	Ursus_maritimus
ENSPTRG00000005886	RNASEH2B	98	89.209	ENSVPAG00000005679	RNASEH2B	99	88.811	Vicugna_pacos
ENSPTRG00000005886	RNASEH2B	98	84.588	ENSVVUG00000024015	RNASEH2B	90	81.639	Vulpes_vulpes
ENSPTRG00000005886	RNASEH2B	95	62.000	ENSXETG00000020720	rnaseh2b	95	57.966	Xenopus_tropicalis
ENSPTRG00000005886	RNASEH2B	95	54.217	ENSXCOG00000018732	rnaseh2b	89	51.504	Xiphophorus_couchianus
ENSPTRG00000005886	RNASEH2B	95	54.217	ENSXMAG00000022554	rnaseh2b	87	52.768	Xiphophorus_maculatus