EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000006488 (Gene tree)
Gene ID: 453000
Gene Symbol: SRSF5
Alias: -
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 44701 bases
Position: chr14:54185271-54229971
Accession: 12546
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000062031	RRM_1	PF00076.22	1.6e-30	1	2
ENSPTRP00000062031	RRM_1	PF00076.22	1.6e-30	2	2
ENSPTRP00000010998	RRM_1	PF00076.22	1.7e-30	1	2
ENSPTRP00000010998	RRM_1	PF00076.22	1.7e-30	2	2
ENSPTRP00000090742	RRM_1	PF00076.22	4.2e-17	1	1
ENSPTRP00000067698	RRM_1	PF00076.22	4.4e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000095187	-	300	-	ENSPTRP00000090742	99 (aa)	-	A0A2I3TNC8
ENSPTRT00000083334	-	801	-	ENSPTRP00000062031	266 (aa)	-	A0A2I3RBK7
ENSPTRT00000108926	-	417	-	ENSPTRP00000067698	138 (aa)	-	A0A2J8PJ02
ENSPTRT00000011879	-	2817	XM_001143701	ENSPTRP00000010998	272 (aa)	XP_001143701	H2Q8I9

Gene Model

Click here to download ENSPTRG00000006488's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03040	Spliceosome	KEGG
ptr05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000006488's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000006488	SRSF5	78	40.230	ENSPTRG00000052587	RBMX	82	43.750
ENSPTRG00000006488	SRSF5	76	47.561	ENSPTRG00000018106	SRSF3	83	44.340
ENSPTRG00000006488	SRSF5	86	62.295	ENSPTRG00000044686	-	50	71.642
ENSPTRG00000006488	SRSF5	86	55.932	ENSPTRG00000046274	-	55	57.386
ENSPTRG00000006488	SRSF5	77	44.444	ENSPTRG00000052688	-	50	55.357
ENSPTRG00000006488	SRSF5	86	45.968	ENSPTRG00000049077	SRSF1	78	61.404
ENSPTRG00000006488	SRSF5	86	36.290	ENSPTRG00000005535	SRSF9	85	37.168
ENSPTRG00000006488	SRSF5	82	39.286	ENSPTRG00000041876	-	58	41.758

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000006488	SRSF5	100	100.000	ENSG00000100650	SRSF5	100	100.000	Homo_sapiens
ENSPTRG00000006488	SRSF5	76	90.667	ENSAPOG00000008642	srsf5b	63	85.405	Acanthochromis_polyacanthus
ENSPTRG00000006488	SRSF5	100	100.000	ENSAMEG00000014574	SRSF5	100	98.540	Ailuropoda_melanoleuca
ENSPTRG00000006488	SRSF5	76	90.667	ENSACIG00000010742	srsf5b	87	73.188	Amphilophus_citrinellus
ENSPTRG00000006488	SRSF5	76	90.667	ENSAOCG00000005719	srsf5b	78	78.947	Amphiprion_ocellaris
ENSPTRG00000006488	SRSF5	76	90.667	ENSAPEG00000007830	srsf5b	78	78.947	Amphiprion_percula
ENSPTRG00000006488	SRSF5	76	90.667	ENSATEG00000019112	srsf5b	63	82.258	Anabas_testudineus
ENSPTRG00000006488	SRSF5	98	92.884	ENSAPLG00000014681	SRSF5	67	94.444	Anas_platyrhynchos
ENSPTRG00000006488	SRSF5	100	99.000	ENSACAG00000005143	SRSF5	100	95.604	Anolis_carolinensis
ENSPTRG00000006488	SRSF5	100	98.990	ENSANAG00000037529	-	96	96.800	Aotus_nancymaae
ENSPTRG00000006488	SRSF5	100	100.000	ENSANAG00000027977	-	100	100.000	Aotus_nancymaae
ENSPTRG00000006488	SRSF5	76	90.667	ENSACLG00000026424	srsf5b	63	84.324	Astatotilapia_calliptera
ENSPTRG00000006488	SRSF5	92	79.389	ENSAMXG00000011932	srsf5b	88	77.863	Astyanax_mexicanus
ENSPTRG00000006488	SRSF5	100	100.000	ENSBTAG00000011596	SRSF5	100	98.540	Bos_taurus
ENSPTRG00000006488	SRSF5	100	100.000	ENSCJAG00000014884	SRSF5	100	100.000	Callithrix_jacchus
ENSPTRG00000006488	SRSF5	100	100.000	ENSCAFG00000016589	SRSF5	100	98.540	Canis_familiaris
ENSPTRG00000006488	SRSF5	100	100.000	ENSCAFG00020005661	SRSF5	100	98.540	Canis_lupus_dingo
ENSPTRG00000006488	SRSF5	100	100.000	ENSCHIG00000016794	SRSF5	100	97.826	Capra_hircus
ENSPTRG00000006488	SRSF5	100	100.000	ENSTSYG00000007786	SRSF5	100	100.000	Carlito_syrichta
ENSPTRG00000006488	SRSF5	100	100.000	ENSCAPG00000008801	SRSF5	100	97.101	Cavia_aperea
ENSPTRG00000006488	SRSF5	100	100.000	ENSCPOG00000039926	SRSF5	65	100.000	Cavia_porcellus
ENSPTRG00000006488	SRSF5	100	100.000	ENSCCAG00000029002	SRSF5	100	100.000	Cebus_capucinus
ENSPTRG00000006488	SRSF5	100	100.000	ENSCATG00000045051	SRSF5	100	100.000	Cercocebus_atys
ENSPTRG00000006488	SRSF5	100	100.000	ENSCLAG00000004755	SRSF5	100	97.810	Chinchilla_lanigera
ENSPTRG00000006488	SRSF5	100	100.000	ENSCSAG00000013041	SRSF5	100	100.000	Chlorocebus_sabaeus
ENSPTRG00000006488	SRSF5	100	100.000	ENSCPBG00000021653	SRSF5	100	96.324	Chrysemys_picta_bellii
ENSPTRG00000006488	SRSF5	100	100.000	ENSCANG00000030560	SRSF5	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000006488	SRSF5	100	100.000	ENSCGRG00001015339	Srsf5	100	97.794	Cricetulus_griseus_chok1gshd
ENSPTRG00000006488	SRSF5	100	100.000	ENSCGRG00000009833	Srsf5	100	98.162	Cricetulus_griseus_crigri
ENSPTRG00000006488	SRSF5	76	92.000	ENSCSEG00000003801	srsf5b	64	82.353	Cynoglossus_semilaevis
ENSPTRG00000006488	SRSF5	73	91.667	ENSCVAG00000017240	srsf5b	57	84.324	Cyprinodon_variegatus
ENSPTRG00000006488	SRSF5	92	78.462	ENSDARG00000027734	srsf5b	90	82.400	Danio_rerio
ENSPTRG00000006488	SRSF5	100	100.000	ENSDNOG00000006160	SRSF5	100	98.897	Dasypus_novemcinctus
ENSPTRG00000006488	SRSF5	100	100.000	ENSDORG00000003989	Srsf5	100	98.897	Dipodomys_ordii
ENSPTRG00000006488	SRSF5	100	92.647	ENSETEG00000020396	SRSF5	66	89.944	Echinops_telfairi
ENSPTRG00000006488	SRSF5	95	62.766	ENSEBUG00000006229	srsf5b	68	65.730	Eptatretus_burgeri
ENSPTRG00000006488	SRSF5	100	100.000	ENSEASG00005016615	SRSF5	100	98.540	Equus_asinus_asinus
ENSPTRG00000006488	SRSF5	100	100.000	ENSECAG00000026873	SRSF5	100	99.275	Equus_caballus
ENSPTRG00000006488	SRSF5	76	92.000	ENSELUG00000019852	srsf5b	88	69.536	Esox_lucius
ENSPTRG00000006488	SRSF5	100	100.000	ENSFCAG00000008848	SRSF5	100	99.275	Felis_catus
ENSPTRG00000006488	SRSF5	100	97.980	ENSFALG00000004979	SRSF5	67	94.972	Ficedula_albicollis
ENSPTRG00000006488	SRSF5	100	100.000	ENSFDAG00000011562	SRSF5	100	98.897	Fukomys_damarensis
ENSPTRG00000006488	SRSF5	96	71.119	ENSFHEG00000009476	srsf5b	60	84.324	Fundulus_heteroclitus
ENSPTRG00000006488	SRSF5	76	92.000	ENSGMOG00000000595	srsf5b	97	67.117	Gadus_morhua
ENSPTRG00000006488	SRSF5	100	97.980	ENSGALG00000009421	SRSF5	100	96.377	Gallus_gallus
ENSPTRG00000006488	SRSF5	94	72.830	ENSGAFG00000002865	srsf5b	61	82.703	Gambusia_affinis
ENSPTRG00000006488	SRSF5	72	94.366	ENSGACG00000007834	srsf5b	89	70.922	Gasterosteus_aculeatus
ENSPTRG00000006488	SRSF5	100	100.000	ENSGAGG00000004447	SRSF5	100	96.324	Gopherus_agassizii
ENSPTRG00000006488	SRSF5	100	100.000	ENSGGOG00000016462	SRSF5	100	100.000	Gorilla_gorilla
ENSPTRG00000006488	SRSF5	76	90.667	ENSHBUG00000012462	srsf5b	93	75.000	Haplochromis_burtoni
ENSPTRG00000006488	SRSF5	100	100.000	ENSHGLG00000010147	SRSF5	100	98.897	Heterocephalus_glaber_female
ENSPTRG00000006488	SRSF5	100	66.667	ENSHGLG00100000095	-	62	65.517	Heterocephalus_glaber_male
ENSPTRG00000006488	SRSF5	100	100.000	ENSHGLG00100015328	SRSF5	100	98.897	Heterocephalus_glaber_male
ENSPTRG00000006488	SRSF5	76	88.000	ENSHCOG00000005592	srsf5b	64	77.128	Hippocampus_comes
ENSPTRG00000006488	SRSF5	100	100.000	ENSSTOG00000020672	SRSF5	100	99.265	Ictidomys_tridecemlineatus
ENSPTRG00000006488	SRSF5	100	100.000	ENSJJAG00000001688	Srsf5	100	97.445	Jaculus_jaculus
ENSPTRG00000006488	SRSF5	92	79.545	ENSKMAG00000020486	srsf5b	87	78.788	Kryptolebias_marmoratus
ENSPTRG00000006488	SRSF5	73	91.667	ENSLBEG00000013647	srsf5b	66	81.122	Labrus_bergylta
ENSPTRG00000006488	SRSF5	100	85.149	ENSLACG00000005874	SRSF5	67	90.608	Latimeria_chalumnae
ENSPTRG00000006488	SRSF5	99	78.788	ENSLOCG00000012438	srsf5b	69	82.703	Lepisosteus_oculatus
ENSPTRG00000006488	SRSF5	100	98.990	ENSLAFG00000005260	SRSF5	100	97.810	Loxodonta_africana
ENSPTRG00000006488	SRSF5	100	100.000	ENSMFAG00000002393	SRSF5	100	100.000	Macaca_fascicularis
ENSPTRG00000006488	SRSF5	100	100.000	ENSMNEG00000030872	SRSF5	100	100.000	Macaca_nemestrina
ENSPTRG00000006488	SRSF5	100	100.000	ENSMLEG00000030017	SRSF5	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000006488	SRSF5	73	91.667	ENSMAMG00000002673	srsf5b	63	80.978	Mastacembelus_armatus
ENSPTRG00000006488	SRSF5	76	90.667	ENSMZEG00005003550	srsf5b	63	84.324	Maylandia_zebra
ENSPTRG00000006488	SRSF5	77	79.412	ENSMGAG00000011835	SRSF5	62	91.429	Meleagris_gallopavo
ENSPTRG00000006488	SRSF5	100	100.000	ENSMAUG00000009544	Srsf5	100	98.162	Mesocricetus_auratus
ENSPTRG00000006488	SRSF5	100	84.848	ENSMICG00000046738	-	95	74.167	Microcebus_murinus
ENSPTRG00000006488	SRSF5	100	100.000	ENSMICG00000037432	-	100	100.000	Microcebus_murinus
ENSPTRG00000006488	SRSF5	100	100.000	ENSMOCG00000013134	Srsf5	100	97.794	Microtus_ochrogaster
ENSPTRG00000006488	SRSF5	94	69.853	ENSMMOG00000000137	srsf5b	97	61.481	Mola_mola
ENSPTRG00000006488	SRSF5	100	100.000	ENSMODG00000011362	SRSF5	100	96.691	Monodelphis_domestica
ENSPTRG00000006488	SRSF5	92	74.627	ENSMALG00000021875	srsf5b	88	74.627	Monopterus_albus
ENSPTRG00000006488	SRSF5	100	100.000	ENSMUSG00000021134	Srsf5	100	98.162	Mus_musculus
ENSPTRG00000006488	SRSF5	100	100.000	MGP_PahariEiJ_G0029659	Srsf5	100	98.162	Mus_pahari
ENSPTRG00000006488	SRSF5	100	100.000	ENSMPUG00000007458	SRSF5	100	98.540	Mustela_putorius_furo
ENSPTRG00000006488	SRSF5	100	100.000	ENSMLUG00000011939	SRSF5	100	96.429	Myotis_lucifugus
ENSPTRG00000006488	SRSF5	100	100.000	ENSNGAG00000010073	-	100	98.529	Nannospalax_galili
ENSPTRG00000006488	SRSF5	76	90.667	ENSNBRG00000001285	srsf5b	63	83.422	Neolamprologus_brichardi
ENSPTRG00000006488	SRSF5	100	100.000	ENSNLEG00000001615	SRSF5	100	100.000	Nomascus_leucogenys
ENSPTRG00000006488	SRSF5	100	100.000	ENSOPRG00000008286	SRSF5	100	96.786	Ochotona_princeps
ENSPTRG00000006488	SRSF5	100	96.970	ENSODEG00000000700	-	68	97.765	Octodon_degus
ENSPTRG00000006488	SRSF5	100	100.000	ENSODEG00000013469	-	100	98.162	Octodon_degus
ENSPTRG00000006488	SRSF5	76	90.667	ENSONIG00000005759	srsf5b	63	84.324	Oreochromis_niloticus
ENSPTRG00000006488	SRSF5	100	92.647	ENSOANG00000013336	SRSF5	67	93.296	Ornithorhynchus_anatinus
ENSPTRG00000006488	SRSF5	100	100.000	ENSOCUG00000009274	SRSF5	100	96.763	Oryctolagus_cuniculus
ENSPTRG00000006488	SRSF5	79	88.462	ENSORLG00000029854	srsf5b	58	80.214	Oryzias_latipes
ENSPTRG00000006488	SRSF5	79	88.462	ENSORLG00015001720	srsf5b	63	81.818	Oryzias_latipes_hsok
ENSPTRG00000006488	SRSF5	100	100.000	ENSOGAG00000015122	SRSF5	100	98.897	Otolemur_garnettii
ENSPTRG00000006488	SRSF5	100	100.000	ENSPPAG00000029921	SRSF5	100	100.000	Pan_paniscus
ENSPTRG00000006488	SRSF5	100	100.000	ENSPPRG00000012903	SRSF5	100	99.275	Panthera_pardus
ENSPTRG00000006488	SRSF5	100	100.000	ENSPTIG00000018589	SRSF5	100	99.275	Panthera_tigris_altaica
ENSPTRG00000006488	SRSF5	100	100.000	ENSPANG00000021091	SRSF5	100	100.000	Papio_anubis
ENSPTRG00000006488	SRSF5	100	100.000	ENSPSIG00000012522	SRSF5	100	95.956	Pelodiscus_sinensis
ENSPTRG00000006488	SRSF5	91	77.863	ENSPMGG00000021646	srsf5b	87	79.231	Periophthalmus_magnuspinnatus
ENSPTRG00000006488	SRSF5	100	100.000	ENSPEMG00000020173	Srsf5	100	97.794	Peromyscus_maniculatus_bairdii
ENSPTRG00000006488	SRSF5	81	70.732	ENSPMAG00000007790	srsf5b	67	62.694	Petromyzon_marinus
ENSPTRG00000006488	SRSF5	100	100.000	ENSPCIG00000011877	SRSF5	100	96.691	Phascolarctos_cinereus
ENSPTRG00000006488	SRSF5	76	90.667	ENSPFOG00000017700	srsf5b	61	84.865	Poecilia_formosa
ENSPTRG00000006488	SRSF5	76	90.667	ENSPLAG00000006480	srsf5b	61	84.409	Poecilia_latipinna
ENSPTRG00000006488	SRSF5	92	75.188	ENSPMEG00000012751	srsf5b	88	73.684	Poecilia_mexicana
ENSPTRG00000006488	SRSF5	94	72.830	ENSPREG00000010381	srsf5b	61	83.784	Poecilia_reticulata
ENSPTRG00000006488	SRSF5	100	100.000	ENSPPYG00000005945	SRSF5	100	100.000	Pongo_abelii
ENSPTRG00000006488	SRSF5	100	98.990	ENSPCAG00000004405	SRSF5	100	99.315	Procavia_capensis
ENSPTRG00000006488	SRSF5	100	100.000	ENSPCOG00000014442	SRSF5	100	99.275	Propithecus_coquereli
ENSPTRG00000006488	SRSF5	100	77.372	ENSPVAG00000009828	SRSF5	66	68.156	Pteropus_vampyrus
ENSPTRG00000006488	SRSF5	76	90.667	ENSPNYG00000002669	srsf5b	94	75.000	Pundamilia_nyererei
ENSPTRG00000006488	SRSF5	92	78.626	ENSPNAG00000011262	srsf5b	88	77.099	Pygocentrus_nattereri
ENSPTRG00000006488	SRSF5	100	100.000	ENSRNOG00000005513	Srsf5	100	97.794	Rattus_norvegicus
ENSPTRG00000006488	SRSF5	100	100.000	ENSRBIG00000013003	SRSF5	100	100.000	Rhinopithecus_bieti
ENSPTRG00000006488	SRSF5	100	100.000	ENSRROG00000043407	SRSF5	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000006488	SRSF5	100	100.000	ENSSBOG00000030784	SRSF5	100	100.000	Saimiri_boliviensis_boliviensis
ENSPTRG00000006488	SRSF5	100	100.000	ENSSHAG00000002871	SRSF5	100	96.691	Sarcophilus_harrisii
ENSPTRG00000006488	SRSF5	76	90.667	ENSSMAG00000019728	srsf5b	61	79.695	Scophthalmus_maximus
ENSPTRG00000006488	SRSF5	100	70.714	ENSSDUG00000005766	srsf5b	65	82.703	Seriola_dumerili
ENSPTRG00000006488	SRSF5	92	73.846	ENSSLDG00000023255	srsf5b	88	73.684	Seriola_lalandi_dorsalis
ENSPTRG00000006488	SRSF5	100	97.980	ENSSARG00000001059	SRSF5	66	86.034	Sorex_araneus
ENSPTRG00000006488	SRSF5	100	100.000	ENSSPUG00000002464	SRSF5	100	93.197	Sphenodon_punctatus
ENSPTRG00000006488	SRSF5	76	90.667	ENSSPAG00000015325	srsf5b	63	84.865	Stegastes_partitus
ENSPTRG00000006488	SRSF5	100	100.000	ENSSSCG00000032583	SRSF5	100	97.810	Sus_scrofa
ENSPTRG00000006488	SRSF5	100	97.980	ENSTGUG00000011425	SRSF5	67	94.972	Taeniopygia_guttata
ENSPTRG00000006488	SRSF5	88	80.159	ENSTRUG00000017811	srsf5b	59	84.153	Takifugu_rubripes
ENSPTRG00000006488	SRSF5	100	70.819	ENSTNIG00000016411	srsf5b	66	84.153	Tetraodon_nigroviridis
ENSPTRG00000006488	SRSF5	100	100.000	ENSTBEG00000001972	SRSF5	100	96.377	Tupaia_belangeri
ENSPTRG00000006488	SRSF5	99	100.000	ENSTTRG00000003318	SRSF5	100	97.818	Tursiops_truncatus
ENSPTRG00000006488	SRSF5	100	100.000	ENSUAMG00000014184	SRSF5	100	98.540	Ursus_americanus
ENSPTRG00000006488	SRSF5	100	100.000	ENSUMAG00000009827	SRSF5	100	98.175	Ursus_maritimus
ENSPTRG00000006488	SRSF5	100	100.000	ENSVPAG00000006448	SRSF5	100	99.265	Vicugna_pacos
ENSPTRG00000006488	SRSF5	100	100.000	ENSVVUG00000003790	SRSF5	100	98.540	Vulpes_vulpes
ENSPTRG00000006488	SRSF5	99	87.129	ENSXETG00000002211	srsf5	67	92.308	Xenopus_tropicalis
ENSPTRG00000006488	SRSF5	76	90.667	ENSXCOG00000001570	srsf5b	63	84.409	Xiphophorus_couchianus
ENSPTRG00000006488	SRSF5	76	90.667	ENSXMAG00000026416	srsf5b	88	74.627	Xiphophorus_maculatus