EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000006704 (Gene tree)
Gene ID: 100614622
Gene Symbol: PAPOLA
Alias: -
Full Name: poly(A) polymerase alpha
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 67276 bases
Position: chr14:81704021-81771296
Accession: 3361
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000091246	PAP_RNA-bind	PF04926.15	7.6e-23	1	1
ENSPTRP00000011429	PAP_RNA-bind	PF04926.15	1.1e-22	1	1
ENSPTRP00000080463	PAP_RNA-bind	PF04926.15	6.3e-12	1	1
ENSPTRP00000069117	PAP_RNA-bind	PF04926.15	6.8e-12	1	1
ENSPTRP00000084699	PAP_RNA-bind	PF04926.15	2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000091399	-	2205	-	ENSPTRP00000084699	734 (aa)	-	A0A2I3T632
ENSPTRT00000105431	-	2037	-	ENSPTRP00000080463	678 (aa)	-	A0A2I3SU30
ENSPTRT00000012343	-	4517	XM_003314514	ENSPTRP00000011429	745 (aa)	XP_003314562	H2Q8W4
ENSPTRT00000098679	-	2067	-	ENSPTRP00000069117	688 (aa)	-	A0A2I3RWW6
ENSPTRT00000099713	-	954	-	ENSPTRP00000076213	317 (aa)	-	A0A2I3SGS9
ENSPTRT00000100534	-	4454	XM_009428421	ENSPTRP00000091246	724 (aa)	XP_009426696	A0A2I3TPS7

Gene Model

Click here to download ENSPTRG00000006704's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000006704's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000006704	PAPOLA	98	61.717	ENSPTRG00000011948	PAPOLG	98	62.225
ENSPTRG00000006704	PAPOLA	99	78.947	ENSPTRG00000045383	PAPOLB	91	86.080

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000006704	PAPOLA	100	100.000	ENSG00000090060	PAPOLA	100	100.000	Homo_sapiens
ENSPTRG00000006704	PAPOLA	99	97.715	ENSAMEG00000014142	PAPOLA	99	97.715	Ailuropoda_melanoleuca
ENSPTRG00000006704	PAPOLA	99	90.995	ENSAPLG00000006645	PAPOLA	99	90.579	Anas_platyrhynchos
ENSPTRG00000006704	PAPOLA	99	91.409	ENSACAG00000013474	PAPOLA	99	94.737	Anolis_carolinensis
ENSPTRG00000006704	PAPOLA	100	99.597	ENSANAG00000018274	PAPOLA	100	99.597	Aotus_nancymaae
ENSPTRG00000006704	PAPOLA	74	91.760	ENSANAG00000027941	-	98	91.760	Aotus_nancymaae
ENSPTRG00000006704	PAPOLA	100	72.527	ENSAMXG00000018141	papola	99	85.099	Astyanax_mexicanus
ENSPTRG00000006704	PAPOLA	100	97.514	ENSBTAG00000004054	PAPOLA	100	97.514	Bos_taurus
ENSPTRG00000006704	PAPOLA	100	99.597	ENSCJAG00000006512	PAPOLA	100	99.597	Callithrix_jacchus
ENSPTRG00000006704	PAPOLA	100	97.071	ENSCAFG00000017783	PAPOLA	100	97.071	Canis_familiaris
ENSPTRG00000006704	PAPOLA	100	97.652	ENSCAFG00020011550	PAPOLA	100	97.652	Canis_lupus_dingo
ENSPTRG00000006704	PAPOLA	100	97.181	ENSCHIG00000025004	-	100	97.181	Capra_hircus
ENSPTRG00000006704	PAPOLA	99	97.226	ENSTSYG00000012384	PAPOLA	99	97.226	Carlito_syrichta
ENSPTRG00000006704	PAPOLA	100	93.826	ENSCPOG00000002648	PAPOLA	100	93.826	Cavia_porcellus
ENSPTRG00000006704	PAPOLA	100	99.732	ENSCCAG00000025120	PAPOLA	100	99.732	Cebus_capucinus
ENSPTRG00000006704	PAPOLA	100	99.866	ENSCATG00000018815	PAPOLA	100	99.866	Cercocebus_atys
ENSPTRG00000006704	PAPOLA	100	97.790	ENSCLAG00000016342	PAPOLA	100	97.790	Chinchilla_lanigera
ENSPTRG00000006704	PAPOLA	100	99.866	ENSCSAG00000010516	PAPOLA	100	99.866	Chlorocebus_sabaeus
ENSPTRG00000006704	PAPOLA	72	83.110	ENSCHOG00000001115	PAPOLA	72	83.110	Choloepus_hoffmanni
ENSPTRG00000006704	PAPOLA	100	92.627	ENSCPBG00000024125	PAPOLA	100	92.627	Chrysemys_picta_bellii
ENSPTRG00000006704	PAPOLA	99	94.616	ENSCANG00000000159	PAPOLA	100	94.616	Colobus_angolensis_palliatus
ENSPTRG00000006704	PAPOLA	100	95.718	ENSCGRG00001022693	-	100	95.718	Cricetulus_griseus_chok1gshd
ENSPTRG00000006704	PAPOLA	100	87.785	ENSCGRG00001000229	-	99	90.032	Cricetulus_griseus_chok1gshd
ENSPTRG00000006704	PAPOLA	99	83.871	ENSCGRG00001002732	-	99	83.871	Cricetulus_griseus_chok1gshd
ENSPTRG00000006704	PAPOLA	100	95.181	ENSCGRG00000003664	-	100	95.700	Cricetulus_griseus_crigri
ENSPTRG00000006704	PAPOLA	100	82.735	ENSCGRG00000000257	-	100	82.735	Cricetulus_griseus_crigri
ENSPTRG00000006704	PAPOLA	98	80.601	ENSCGRG00000001888	-	96	80.191	Cricetulus_griseus_crigri
ENSPTRG00000006704	PAPOLA	70	54.968	ENSCSEG00000001841	-	71	54.968	Cynoglossus_semilaevis
ENSPTRG00000006704	PAPOLA	100	70.573	ENSDARG00000009585	papola	100	69.867	Danio_rerio
ENSPTRG00000006704	PAPOLA	65	89.331	ENSDORG00000013415	-	100	90.586	Dipodomys_ordii
ENSPTRG00000006704	PAPOLA	99	83.580	ENSETEG00000004889	PAPOLA	100	83.445	Echinops_telfairi
ENSPTRG00000006704	PAPOLA	100	69.089	ENSELUG00000018972	papola	100	68.966	Esox_lucius
ENSPTRG00000006704	PAPOLA	100	98.343	ENSFCAG00000006784	PAPOLA	100	98.343	Felis_catus
ENSPTRG00000006704	PAPOLA	99	93.750	ENSFALG00000002547	PAPOLA	98	87.337	Ficedula_albicollis
ENSPTRG00000006704	PAPOLA	99	95.973	ENSFDAG00000010370	PAPOLA	100	95.973	Fukomys_damarensis
ENSPTRG00000006704	PAPOLA	73	65.461	ENSGMOG00000010209	papola	100	65.863	Gadus_morhua
ENSPTRG00000006704	PAPOLA	100	90.214	ENSGALG00000033099	PAPOLA	100	89.946	Gallus_gallus
ENSPTRG00000006704	PAPOLA	69	52.282	ENSGACG00000006142	-	100	53.958	Gasterosteus_aculeatus
ENSPTRG00000006704	PAPOLA	92	94.760	ENSGAGG00000020500	PAPOLA	99	94.760	Gopherus_agassizii
ENSPTRG00000006704	PAPOLA	100	100.000	ENSGGOG00000006287	PAPOLA	100	100.000	Gorilla_gorilla
ENSPTRG00000006704	PAPOLA	99	85.135	ENSHGLG00000017457	-	100	84.324	Heterocephalus_glaber_female
ENSPTRG00000006704	PAPOLA	100	78.926	ENSHGLG00000007467	-	100	78.523	Heterocephalus_glaber_female
ENSPTRG00000006704	PAPOLA	100	96.961	ENSHGLG00000007909	-	100	96.961	Heterocephalus_glaber_female
ENSPTRG00000006704	PAPOLA	100	96.823	ENSHGLG00100017273	PAPOLA	100	96.823	Heterocephalus_glaber_male
ENSPTRG00000006704	PAPOLA	100	68.170	ENSIPUG00000005919	papola	100	67.254	Ictalurus_punctatus
ENSPTRG00000006704	PAPOLA	100	98.066	ENSSTOG00000011471	PAPOLA	100	98.066	Ictidomys_tridecemlineatus
ENSPTRG00000006704	PAPOLA	99	96.533	ENSJJAG00000024340	Papola	100	96.533	Jaculus_jaculus
ENSPTRG00000006704	PAPOLA	99	76.707	ENSLACG00000018136	PAPOLA	99	76.707	Latimeria_chalumnae
ENSPTRG00000006704	PAPOLA	99	65.691	ENSLOCG00000008632	papola	99	65.824	Lepisosteus_oculatus
ENSPTRG00000006704	PAPOLA	99	96.631	ENSLAFG00000000946	PAPOLA	99	96.631	Loxodonta_africana
ENSPTRG00000006704	PAPOLA	100	99.866	ENSMFAG00000001792	PAPOLA	100	99.866	Macaca_fascicularis
ENSPTRG00000006704	PAPOLA	100	99.866	ENSMMUG00000018610	PAPOLA	100	99.866	Macaca_mulatta
ENSPTRG00000006704	PAPOLA	100	99.866	ENSMNEG00000043747	PAPOLA	100	99.866	Macaca_nemestrina
ENSPTRG00000006704	PAPOLA	100	99.866	ENSMLEG00000032066	PAPOLA	100	99.866	Mandrillus_leucophaeus
ENSPTRG00000006704	PAPOLA	84	89.172	ENSMGAG00000013228	-	100	88.854	Meleagris_gallopavo
ENSPTRG00000006704	PAPOLA	100	95.994	ENSMAUG00000017178	Papola	100	95.994	Mesocricetus_auratus
ENSPTRG00000006704	PAPOLA	100	98.343	ENSMICG00000010347	PAPOLA	100	98.343	Microcebus_murinus
ENSPTRG00000006704	PAPOLA	100	95.856	ENSMOCG00000021670	Papola	100	95.856	Microtus_ochrogaster
ENSPTRG00000006704	PAPOLA	99	82.094	ENSMODG00000001969	-	99	81.868	Monodelphis_domestica
ENSPTRG00000006704	PAPOLA	100	96.242	ENSMODG00000012887	-	100	96.242	Monodelphis_domestica
ENSPTRG00000006704	PAPOLA	100	95.168	MGP_CAROLIEiJ_G0018093	Papola	100	95.168	Mus_caroli
ENSPTRG00000006704	PAPOLA	100	95.442	ENSMUSG00000021111	Papola	100	95.442	Mus_musculus
ENSPTRG00000006704	PAPOLA	100	95.442	MGP_PahariEiJ_G0029850	Papola	100	95.442	Mus_pahari
ENSPTRG00000006704	PAPOLA	100	95.580	MGP_SPRETEiJ_G0018943	Papola	100	95.580	Mus_spretus
ENSPTRG00000006704	PAPOLA	100	97.987	ENSMPUG00000003054	PAPOLA	100	97.987	Mustela_putorius_furo
ENSPTRG00000006704	PAPOLA	100	95.570	ENSMLUG00000010922	PAPOLA	100	95.570	Myotis_lucifugus
ENSPTRG00000006704	PAPOLA	100	96.133	ENSNGAG00000022172	Papola	100	96.133	Nannospalax_galili
ENSPTRG00000006704	PAPOLA	100	96.892	ENSNLEG00000000625	PAPOLA	100	96.892	Nomascus_leucogenys
ENSPTRG00000006704	PAPOLA	67	86.232	ENSMEUG00000007831	-	74	85.714	Notamacropus_eugenii
ENSPTRG00000006704	PAPOLA	97	91.736	ENSOPRG00000007625	PAPOLA	100	91.736	Ochotona_princeps
ENSPTRG00000006704	PAPOLA	69	52.301	ENSONIG00000001062	-	96	54.202	Oreochromis_niloticus
ENSPTRG00000006704	PAPOLA	99	93.840	ENSOANG00000013812	PAPOLA	99	93.840	Ornithorhynchus_anatinus
ENSPTRG00000006704	PAPOLA	99	94.616	ENSOCUG00000011531	PAPOLA	99	94.616	Oryctolagus_cuniculus
ENSPTRG00000006704	PAPOLA	100	97.852	ENSOGAG00000004611	PAPOLA	100	97.852	Otolemur_garnettii
ENSPTRG00000006704	PAPOLA	100	97.450	ENSOARG00000016579	-	100	97.450	Ovis_aries
ENSPTRG00000006704	PAPOLA	100	100.000	ENSPPAG00000030505	PAPOLA	100	100.000	Pan_paniscus
ENSPTRG00000006704	PAPOLA	100	98.343	ENSPPRG00000008616	PAPOLA	100	98.343	Panthera_pardus
ENSPTRG00000006704	PAPOLA	99	98.336	ENSPTIG00000018852	PAPOLA	99	98.336	Panthera_tigris_altaica
ENSPTRG00000006704	PAPOLA	100	99.866	ENSPANG00000025582	PAPOLA	100	99.866	Papio_anubis
ENSPTRG00000006704	PAPOLA	100	69.565	ENSPKIG00000014471	papola	100	69.909	Paramormyrops_kingsleyae
ENSPTRG00000006704	PAPOLA	100	92.895	ENSPSIG00000014157	PAPOLA	87	92.895	Pelodiscus_sinensis
ENSPTRG00000006704	PAPOLA	100	95.994	ENSPEMG00000000043	Papola	100	95.994	Peromyscus_maniculatus_bairdii
ENSPTRG00000006704	PAPOLA	100	95.845	ENSPCIG00000013234	PAPOLA	100	95.845	Phascolarctos_cinereus
ENSPTRG00000006704	PAPOLA	100	97.584	ENSPPYG00000006128	PAPOLA	100	97.584	Pongo_abelii
ENSPTRG00000006704	PAPOLA	89	90.030	ENSPCAG00000004199	PAPOLA	100	90.030	Procavia_capensis
ENSPTRG00000006704	PAPOLA	99	94.875	ENSPCOG00000022117	PAPOLA	99	94.875	Propithecus_coquereli
ENSPTRG00000006704	PAPOLA	100	96.510	ENSPVAG00000013925	PAPOLA	100	96.510	Pteropus_vampyrus
ENSPTRG00000006704	PAPOLA	100	69.363	ENSPNAG00000010467	papola	100	70.201	Pygocentrus_nattereri
ENSPTRG00000006704	PAPOLA	100	95.034	ENSRNOG00000004827	Papola	100	95.034	Rattus_norvegicus
ENSPTRG00000006704	PAPOLA	99	97.507	ENSRBIG00000038490	PAPOLA	100	97.507	Rhinopithecus_bieti
ENSPTRG00000006704	PAPOLA	100	99.732	ENSRROG00000025545	PAPOLA	100	99.732	Rhinopithecus_roxellana
ENSPTRG00000006704	PAPOLA	99	99.596	ENSSBOG00000024061	PAPOLA	100	99.462	Saimiri_boliviensis_boliviensis
ENSPTRG00000006704	PAPOLA	99	95.957	ENSSHAG00000015211	PAPOLA	99	95.957	Sarcophilus_harrisii
ENSPTRG00000006704	PAPOLA	100	70.732	ENSSFOG00015004431	papola	99	84.991	Scleropages_formosus
ENSPTRG00000006704	PAPOLA	98	47.214	ENSSDUG00000018247	-	97	46.481	Seriola_dumerili
ENSPTRG00000006704	PAPOLA	100	92.359	ENSSPUG00000005835	PAPOLA	100	92.359	Sphenodon_punctatus
ENSPTRG00000006704	PAPOLA	100	98.121	ENSSSCG00000002505	-	100	98.121	Sus_scrofa
ENSPTRG00000006704	PAPOLA	99	90.713	ENSTGUG00000012687	PAPOLA	99	90.162	Taeniopygia_guttata
ENSPTRG00000006704	PAPOLA	75	88.043	ENSTBEG00000000194	PAPOLA	75	88.043	Tupaia_belangeri
ENSPTRG00000006704	PAPOLA	80	98.701	ENSTTRG00000005717	PAPOLA	80	98.701	Tursiops_truncatus
ENSPTRG00000006704	PAPOLA	58	99.289	ENSUAMG00000025737	PAPOLA	98	99.289	Ursus_americanus
ENSPTRG00000006704	PAPOLA	99	97.170	ENSVPAG00000006464	PAPOLA	100	97.170	Vicugna_pacos
ENSPTRG00000006704	PAPOLA	100	97.928	ENSVVUG00000028340	PAPOLA	100	97.928	Vulpes_vulpes
ENSPTRG00000006704	PAPOLA	100	82.884	ENSXETG00000013949	papola	100	82.819	Xenopus_tropicalis