EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000007144 (Gene tree)
Gene ID: 100612661
Gene Symbol: -
Alias: -
Full Name: ribosomal protein S27 like
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 3752 bases
Position: chr15:43978550-43982301
Accession: 100612661
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000092483	Ribosomal_S27e	PF01667.17	6.7e-30	1	1
ENSPTRP00000076093	Ribosomal_S27e	PF01667.17	3e-29	1	1
ENSPTRP00000056306	Ribosomal_S27e	PF01667.17	3.1e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000064743	-	698	XM_009429299	ENSPTRP00000056306	97 (aa)	XP_009427574	H2RBU2
ENSPTRT00000092721	-	291	-	ENSPTRP00000076093	96 (aa)	-	A0A2I3SGF0
ENSPTRT00000106254	-	303	XM_003314703	ENSPTRP00000092483	100 (aa)	XP_003314751	A0A2I3TTF8

Gene Model

Click here to download ENSPTRG00000007144's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000007144's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000007144	-	84	91.667	ENSPTRG00000045895	-	98	93.902
ENSPTRG00000007144	-	82	96.341	ENSPTRG00000001371	RPS27	98	96.341
ENSPTRG00000007144	-	84	92.857	ENSPTRG00000043809	-	98	95.122
ENSPTRG00000007144	-	82	92.683	ENSPTRG00000042867	-	98	92.683
ENSPTRG00000007144	-	84	90.476	ENSPTRG00000048149	-	98	92.683
ENSPTRG00000007144	-	84	92.857	ENSPTRG00000046188	-	98	95.122
ENSPTRG00000007144	-	82	96.341	ENSPTRG00000040120	-	98	96.341
ENSPTRG00000007144	-	84	91.667	ENSPTRG00000048204	-	98	93.902
ENSPTRG00000007144	-	84	92.857	ENSPTRG00000045860	-	98	95.122

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000007144	-	81	71.605	ENSAPOG00000021447	-	60	71.605	Acanthochromis_polyacanthus
ENSPTRG00000007144	-	81	71.605	ENSAPOG00000022298	-	60	71.605	Acanthochromis_polyacanthus
ENSPTRG00000007144	-	97	87.234	ENSAMEG00000007270	-	98	87.234	Ailuropoda_melanoleuca
ENSPTRG00000007144	-	100	94.845	ENSANAG00000028244	-	100	94.845	Aotus_nancymaae
ENSPTRG00000007144	-	81	71.605	ENSACLG00000002121	-	89	71.605	Astatotilapia_calliptera
ENSPTRG00000007144	-	91	93.182	ENSCAFG00020009484	-	75	93.182	Canis_lupus_dingo
ENSPTRG00000007144	-	85	63.415	ENSCHIG00000022454	-	66	64.615	Capra_hircus
ENSPTRG00000007144	-	59	91.228	ENSCAPG00000010413	-	75	91.228	Cavia_aperea
ENSPTRG00000007144	-	98	90.526	ENSCHOG00000006723	-	85	90.526	Choloepus_hoffmanni
ENSPTRG00000007144	-	80	93.750	ENSETEG00000001288	-	99	93.750	Echinops_telfairi
ENSPTRG00000007144	-	59	77.193	ENSEEUG00000002457	-	98	77.193	Erinaceus_europaeus
ENSPTRG00000007144	-	100	99.000	ENSMFAG00000039460	RPS27L	100	99.000	Macaca_fascicularis
ENSPTRG00000007144	-	100	99.000	ENSMMUG00000016350	RPS27L	100	99.000	Macaca_mulatta
ENSPTRG00000007144	-	81	71.605	ENSMZEG00005009272	-	89	71.605	Maylandia_zebra
ENSPTRG00000007144	-	100	90.291	ENSMICG00000007109	-	98	100.000	Microcebus_murinus
ENSPTRG00000007144	-	84	95.062	ENSOGAG00000002513	-	100	95.062	Otolemur_garnettii
ENSPTRG00000007144	-	100	100.000	ENSPPAG00000027359	-	100	100.000	Pan_paniscus
ENSPTRG00000007144	-	100	91.000	ENSPPRG00000023087	-	98	100.000	Panthera_pardus
ENSPTRG00000007144	-	100	99.000	ENSPANG00000034038	-	100	99.000	Papio_anubis
ENSPTRG00000007144	-	99	92.708	ENSPVAG00000009340	-	85	94.624	Pteropus_vampyrus
ENSPTRG00000007144	-	80	96.250	ENSSARG00000007919	-	84	96.250	Sorex_araneus
ENSPTRG00000007144	-	99	87.500	ENSTBEG00000008670	-	83	92.473	Tupaia_belangeri
ENSPTRG00000007144	-	93	93.548	ENSTTRG00000003776	-	84	93.548	Tursiops_truncatus
ENSPTRG00000007144	-	99	91.753	ENSVPAG00000005464	-	86	91.753	Vicugna_pacos