EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000007279 (Gene tree)
Gene ID: 453743
Gene Symbol: EDC3
Alias: -
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 65449 bases
Position: chr15:55626386-55691834
Accession: 11860
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000012459	FDF	PF09532.10	5.8e-19	1	1
ENSPTRP00000012459	LSM14	PF12701.7	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000013442	-	3753	XM_016927192	ENSPTRP00000012459	508 (aa)	XP_016782681	K7C295

Gene Model

Click here to download ENSPTRG00000007279's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000007279's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000007279	EDC3	100	99.803	ENSG00000179151	EDC3	100	100.000	Homo_sapiens
ENSPTRG00000007279	EDC3	100	69.804	ENSAPOG00000010791	edc3	100	69.804	Acanthochromis_polyacanthus
ENSPTRG00000007279	EDC3	100	55.728	ENSAPOG00000008655	EDC3	100	55.728	Acanthochromis_polyacanthus
ENSPTRG00000007279	EDC3	100	96.457	ENSAMEG00000008963	EDC3	100	96.457	Ailuropoda_melanoleuca
ENSPTRG00000007279	EDC3	100	68.959	ENSACIG00000017751	edc3	100	68.959	Amphilophus_citrinellus
ENSPTRG00000007279	EDC3	99	59.259	ENSACIG00000005330	EDC3	99	59.259	Amphilophus_citrinellus
ENSPTRG00000007279	EDC3	100	69.804	ENSAOCG00000005431	edc3	100	69.804	Amphiprion_ocellaris
ENSPTRG00000007279	EDC3	100	57.946	ENSAOCG00000009103	-	100	57.946	Amphiprion_ocellaris
ENSPTRG00000007279	EDC3	100	69.804	ENSAPEG00000000968	edc3	100	69.804	Amphiprion_percula
ENSPTRG00000007279	EDC3	100	57.946	ENSAPEG00000007841	EDC3	100	57.946	Amphiprion_percula
ENSPTRG00000007279	EDC3	100	69.941	ENSATEG00000015505	edc3	100	69.941	Anabas_testudineus
ENSPTRG00000007279	EDC3	100	58.667	ENSATEG00000004205	-	100	58.667	Anabas_testudineus
ENSPTRG00000007279	EDC3	90	87.033	ENSAPLG00000008957	EDC3	100	87.033	Anas_platyrhynchos
ENSPTRG00000007279	EDC3	78	87.657	ENSACAG00000000460	-	100	87.657	Anolis_carolinensis
ENSPTRG00000007279	EDC3	100	98.819	ENSANAG00000024078	EDC3	100	98.819	Aotus_nancymaae
ENSPTRG00000007279	EDC3	99	58.090	ENSACLG00000018776	-	99	58.090	Astatotilapia_calliptera
ENSPTRG00000007279	EDC3	100	67.780	ENSACLG00000007232	edc3	100	67.780	Astatotilapia_calliptera
ENSPTRG00000007279	EDC3	100	70.520	ENSAMXG00000001589	edc3	100	70.520	Astyanax_mexicanus
ENSPTRG00000007279	EDC3	100	97.441	ENSBTAG00000007308	EDC3	100	97.441	Bos_taurus
ENSPTRG00000007279	EDC3	100	98.819	ENSCJAG00000017681	EDC3	100	98.819	Callithrix_jacchus
ENSPTRG00000007279	EDC3	100	96.654	ENSCAFG00000017935	EDC3	100	96.654	Canis_familiaris
ENSPTRG00000007279	EDC3	100	96.654	ENSCAFG00020003909	EDC3	100	96.654	Canis_lupus_dingo
ENSPTRG00000007279	EDC3	100	97.244	ENSCHIG00000023658	EDC3	100	97.244	Capra_hircus
ENSPTRG00000007279	EDC3	100	97.638	ENSTSYG00000004822	EDC3	100	97.638	Carlito_syrichta
ENSPTRG00000007279	EDC3	100	95.472	ENSCPOG00000015595	EDC3	100	95.472	Cavia_porcellus
ENSPTRG00000007279	EDC3	100	99.213	ENSCCAG00000021663	EDC3	100	99.213	Cebus_capucinus
ENSPTRG00000007279	EDC3	100	98.819	ENSCATG00000037511	EDC3	100	98.819	Cercocebus_atys
ENSPTRG00000007279	EDC3	100	95.276	ENSCLAG00000005700	EDC3	100	95.276	Chinchilla_lanigera
ENSPTRG00000007279	EDC3	100	98.819	ENSCSAG00000014239	EDC3	100	98.819	Chlorocebus_sabaeus
ENSPTRG00000007279	EDC3	100	89.370	ENSCPBG00000024239	EDC3	100	89.370	Chrysemys_picta_bellii
ENSPTRG00000007279	EDC3	100	38.462	ENSCING00000022142	-	99	38.462	Ciona_intestinalis
ENSPTRG00000007279	EDC3	100	98.819	ENSCANG00000028699	EDC3	100	98.819	Colobus_angolensis_palliatus
ENSPTRG00000007279	EDC3	100	96.654	ENSCGRG00001013874	Edc3	100	96.654	Cricetulus_griseus_chok1gshd
ENSPTRG00000007279	EDC3	100	96.654	ENSCGRG00000011885	Edc3	100	96.654	Cricetulus_griseus_crigri
ENSPTRG00000007279	EDC3	99	69.685	ENSCSEG00000012996	edc3	99	69.685	Cynoglossus_semilaevis
ENSPTRG00000007279	EDC3	100	69.608	ENSCVAG00000008023	edc3	100	69.608	Cyprinodon_variegatus
ENSPTRG00000007279	EDC3	99	68.359	ENSDARG00000051931	edc3	99	69.006	Danio_rerio
ENSPTRG00000007279	EDC3	100	85.465	ENSDNOG00000030661	EDC3	100	85.465	Dasypus_novemcinctus
ENSPTRG00000007279	EDC3	64	98.148	ENSETEG00000002398	-	64	98.148	Echinops_telfairi
ENSPTRG00000007279	EDC3	100	97.835	ENSEASG00005005071	EDC3	100	97.835	Equus_asinus_asinus
ENSPTRG00000007279	EDC3	100	97.835	ENSECAG00000017994	EDC3	100	97.835	Equus_caballus
ENSPTRG00000007279	EDC3	100	61.840	ENSELUG00000007607	EDC3	100	61.840	Esox_lucius
ENSPTRG00000007279	EDC3	100	66.082	ENSELUG00000005794	edc3	100	66.082	Esox_lucius
ENSPTRG00000007279	EDC3	100	96.260	ENSFCAG00000002014	EDC3	100	96.260	Felis_catus
ENSPTRG00000007279	EDC3	98	84.569	ENSFALG00000004543	EDC3	96	84.569	Ficedula_albicollis
ENSPTRG00000007279	EDC3	100	95.276	ENSFDAG00000012582	EDC3	100	95.276	Fukomys_damarensis
ENSPTRG00000007279	EDC3	100	70.000	ENSFHEG00000009375	edc3	100	70.000	Fundulus_heteroclitus
ENSPTRG00000007279	EDC3	100	68.359	ENSGMOG00000002715	edc3	100	68.359	Gadus_morhua
ENSPTRG00000007279	EDC3	100	88.583	ENSGALG00000040181	EDC3	100	88.583	Gallus_gallus
ENSPTRG00000007279	EDC3	100	68.369	ENSGAFG00000014433	edc3	100	68.431	Gambusia_affinis
ENSPTRG00000007279	EDC3	100	68.762	ENSGACG00000009783	edc3	100	68.762	Gasterosteus_aculeatus
ENSPTRG00000007279	EDC3	99	55.728	ENSGACG00000014671	EDC3	99	55.922	Gasterosteus_aculeatus
ENSPTRG00000007279	EDC3	100	89.173	ENSGAGG00000023477	EDC3	100	89.173	Gopherus_agassizii
ENSPTRG00000007279	EDC3	100	100.000	ENSGGOG00000003552	EDC3	100	100.000	Gorilla_gorilla
ENSPTRG00000007279	EDC3	99	58.090	ENSHBUG00000020817	EDC3	99	58.090	Haplochromis_burtoni
ENSPTRG00000007279	EDC3	100	67.780	ENSHBUG00000003635	edc3	100	67.780	Haplochromis_burtoni
ENSPTRG00000007279	EDC3	100	67.773	ENSHCOG00000016834	edc3	100	67.906	Hippocampus_comes
ENSPTRG00000007279	EDC3	99	70.450	ENSIPUG00000005695	edc3	100	70.450	Ictalurus_punctatus
ENSPTRG00000007279	EDC3	100	97.835	ENSSTOG00000013936	EDC3	100	97.835	Ictidomys_tridecemlineatus
ENSPTRG00000007279	EDC3	100	95.669	ENSJJAG00000008074	Edc3	100	95.669	Jaculus_jaculus
ENSPTRG00000007279	EDC3	100	55.906	ENSKMAG00000001987	EDC3	100	55.906	Kryptolebias_marmoratus
ENSPTRG00000007279	EDC3	100	69.352	ENSKMAG00000001243	edc3	100	69.352	Kryptolebias_marmoratus
ENSPTRG00000007279	EDC3	100	69.412	ENSLBEG00000013435	edc3	99	69.412	Labrus_bergylta
ENSPTRG00000007279	EDC3	100	58.527	ENSLBEG00000017984	EDC3	100	58.527	Labrus_bergylta
ENSPTRG00000007279	EDC3	100	77.864	ENSLACG00000014149	EDC3	100	77.864	Latimeria_chalumnae
ENSPTRG00000007279	EDC3	99	67.641	ENSLOCG00000014625	edc3	99	67.641	Lepisosteus_oculatus
ENSPTRG00000007279	EDC3	100	95.866	ENSLAFG00000002992	EDC3	100	95.866	Loxodonta_africana
ENSPTRG00000007279	EDC3	100	98.425	ENSMFAG00000043074	EDC3	100	98.425	Macaca_fascicularis
ENSPTRG00000007279	EDC3	100	98.425	ENSMMUG00000011071	EDC3	100	98.425	Macaca_mulatta
ENSPTRG00000007279	EDC3	100	98.425	ENSMNEG00000035316	EDC3	100	98.425	Macaca_nemestrina
ENSPTRG00000007279	EDC3	100	98.819	ENSMLEG00000030372	EDC3	100	98.819	Mandrillus_leucophaeus
ENSPTRG00000007279	EDC3	100	69.941	ENSMAMG00000000505	edc3	100	69.941	Mastacembelus_armatus
ENSPTRG00000007279	EDC3	99	56.836	ENSMAMG00000005423	-	99	56.836	Mastacembelus_armatus
ENSPTRG00000007279	EDC3	100	67.780	ENSMZEG00005004892	edc3	100	67.780	Maylandia_zebra
ENSPTRG00000007279	EDC3	99	58.594	ENSMZEG00005005654	EDC3	99	58.594	Maylandia_zebra
ENSPTRG00000007279	EDC3	100	87.598	ENSMGAG00000002617	EDC3	100	87.598	Meleagris_gallopavo
ENSPTRG00000007279	EDC3	100	97.244	ENSMICG00000043190	EDC3	100	97.244	Microcebus_murinus
ENSPTRG00000007279	EDC3	100	96.654	ENSMOCG00000016205	Edc3	100	96.654	Microtus_ochrogaster
ENSPTRG00000007279	EDC3	99	68.959	ENSMMOG00000012278	edc3	99	68.959	Mola_mola
ENSPTRG00000007279	EDC3	100	92.913	ENSMODG00000009442	EDC3	100	92.913	Monodelphis_domestica
ENSPTRG00000007279	EDC3	100	69.548	ENSMALG00000008658	edc3	100	69.548	Monopterus_albus
ENSPTRG00000007279	EDC3	100	96.063	MGP_CAROLIEiJ_G0032280	Edc3	100	98.462	Mus_caroli
ENSPTRG00000007279	EDC3	100	95.669	ENSMUSG00000038957	Edc3	100	98.462	Mus_musculus
ENSPTRG00000007279	EDC3	100	96.260	MGP_PahariEiJ_G0015146	Edc3	100	98.462	Mus_pahari
ENSPTRG00000007279	EDC3	100	95.472	MGP_SPRETEiJ_G0033420	Edc3	100	98.462	Mus_spretus
ENSPTRG00000007279	EDC3	100	96.063	ENSMPUG00000017293	EDC3	100	96.063	Mustela_putorius_furo
ENSPTRG00000007279	EDC3	100	96.863	ENSMLUG00000016382	EDC3	100	96.863	Myotis_lucifugus
ENSPTRG00000007279	EDC3	100	96.063	ENSNGAG00000010923	Edc3	100	96.063	Nannospalax_galili
ENSPTRG00000007279	EDC3	99	58.594	ENSNBRG00000007881	EDC3	99	58.594	Neolamprologus_brichardi
ENSPTRG00000007279	EDC3	100	67.976	ENSNBRG00000002434	edc3	100	67.976	Neolamprologus_brichardi
ENSPTRG00000007279	EDC3	100	89.370	ENSNLEG00000014577	EDC3	100	89.370	Nomascus_leucogenys
ENSPTRG00000007279	EDC3	100	91.732	ENSMEUG00000009077	EDC3	100	91.732	Notamacropus_eugenii
ENSPTRG00000007279	EDC3	79	96.296	ENSOPRG00000009540	-	79	96.296	Ochotona_princeps
ENSPTRG00000007279	EDC3	99	59.844	ENSONIG00000002932	-	99	59.844	Oreochromis_niloticus
ENSPTRG00000007279	EDC3	100	67.976	ENSONIG00000008434	edc3	100	67.976	Oreochromis_niloticus
ENSPTRG00000007279	EDC3	78	91.436	ENSOCUG00000017740	EDC3	86	91.436	Oryctolagus_cuniculus
ENSPTRG00000007279	EDC3	100	67.780	ENSORLG00000004883	edc3	100	67.780	Oryzias_latipes
ENSPTRG00000007279	EDC3	100	56.641	ENSORLG00000014399	-	98	56.641	Oryzias_latipes
ENSPTRG00000007279	EDC3	100	56.641	ENSORLG00020019446	-	100	56.641	Oryzias_latipes_hni
ENSPTRG00000007279	EDC3	100	67.583	ENSORLG00020012262	edc3	100	67.583	Oryzias_latipes_hni
ENSPTRG00000007279	EDC3	100	55.664	ENSORLG00015017635	-	96	56.250	Oryzias_latipes_hsok
ENSPTRG00000007279	EDC3	100	67.383	ENSORLG00015005634	edc3	100	67.383	Oryzias_latipes_hsok
ENSPTRG00000007279	EDC3	100	57.031	ENSOMEG00000017354	EDC3	100	57.031	Oryzias_melastigma
ENSPTRG00000007279	EDC3	100	68.627	ENSOMEG00000014026	edc3	100	68.627	Oryzias_melastigma
ENSPTRG00000007279	EDC3	100	97.835	ENSOGAG00000014441	EDC3	100	97.835	Otolemur_garnettii
ENSPTRG00000007279	EDC3	100	96.857	ENSOARG00000003476	EDC3	100	96.857	Ovis_aries
ENSPTRG00000007279	EDC3	100	100.000	ENSPPAG00000040143	EDC3	100	100.000	Pan_paniscus
ENSPTRG00000007279	EDC3	100	96.654	ENSPPRG00000006257	EDC3	100	96.654	Panthera_pardus
ENSPTRG00000007279	EDC3	100	96.654	ENSPTIG00000017424	EDC3	100	96.654	Panthera_tigris_altaica
ENSPTRG00000007279	EDC3	100	98.819	ENSPANG00000015997	EDC3	100	98.819	Papio_anubis
ENSPTRG00000007279	EDC3	100	68.359	ENSPKIG00000004416	edc3	100	69.336	Paramormyrops_kingsleyae
ENSPTRG00000007279	EDC3	100	66.406	ENSPKIG00000019810	EDC3	100	66.406	Paramormyrops_kingsleyae
ENSPTRG00000007279	EDC3	100	83.465	ENSPSIG00000008474	EDC3	100	83.465	Pelodiscus_sinensis
ENSPTRG00000007279	EDC3	100	67.123	ENSPMGG00000007223	edc3	100	67.123	Periophthalmus_magnuspinnatus
ENSPTRG00000007279	EDC3	100	96.260	ENSPEMG00000015260	Edc3	100	96.260	Peromyscus_maniculatus_bairdii
ENSPTRG00000007279	EDC3	100	90.748	ENSPCIG00000006276	EDC3	70	90.927	Phascolarctos_cinereus
ENSPTRG00000007279	EDC3	100	68.872	ENSPFOG00000012204	edc3	100	68.872	Poecilia_formosa
ENSPTRG00000007279	EDC3	100	68.872	ENSPLAG00000014420	edc3	100	68.872	Poecilia_latipinna
ENSPTRG00000007279	EDC3	100	68.872	ENSPMEG00000023289	edc3	100	68.872	Poecilia_mexicana
ENSPTRG00000007279	EDC3	100	69.155	ENSPREG00000016022	edc3	100	69.155	Poecilia_reticulata
ENSPTRG00000007279	EDC3	100	98.425	ENSPPYG00000006642	EDC3	100	98.425	Pongo_abelii
ENSPTRG00000007279	EDC3	88	100.000	ENSPCAG00000002802	EDC3	88	100.000	Procavia_capensis
ENSPTRG00000007279	EDC3	100	97.441	ENSPCOG00000013364	EDC3	100	97.441	Propithecus_coquereli
ENSPTRG00000007279	EDC3	100	96.063	ENSPVAG00000014733	EDC3	100	96.063	Pteropus_vampyrus
ENSPTRG00000007279	EDC3	100	67.780	ENSPNYG00000021797	edc3	100	67.780	Pundamilia_nyererei
ENSPTRG00000007279	EDC3	99	58.090	ENSPNYG00000009669	EDC3	99	58.090	Pundamilia_nyererei
ENSPTRG00000007279	EDC3	100	69.942	ENSPNAG00000019657	edc3	100	69.942	Pygocentrus_nattereri
ENSPTRG00000007279	EDC3	99	96.238	ENSRNOG00000019579	Edc3	99	96.238	Rattus_norvegicus
ENSPTRG00000007279	EDC3	100	98.425	ENSRBIG00000019488	EDC3	100	98.425	Rhinopithecus_bieti
ENSPTRG00000007279	EDC3	100	98.425	ENSRROG00000034959	EDC3	100	98.425	Rhinopithecus_roxellana
ENSPTRG00000007279	EDC3	100	99.016	ENSSBOG00000004896	EDC3	100	99.016	Saimiri_boliviensis_boliviensis
ENSPTRG00000007279	EDC3	96	91.616	ENSSHAG00000015075	EDC3	95	91.616	Sarcophilus_harrisii
ENSPTRG00000007279	EDC3	100	63.137	ENSSFOG00015002439	edc3	100	64.786	Scleropages_formosus
ENSPTRG00000007279	EDC3	100	69.942	ENSSFOG00015016939	edc3	100	70.623	Scleropages_formosus
ENSPTRG00000007279	EDC3	99	56.538	ENSSMAG00000010176	-	99	56.538	Scophthalmus_maximus
ENSPTRG00000007279	EDC3	100	68.824	ENSSMAG00000010695	edc3	100	69.548	Scophthalmus_maximus
ENSPTRG00000007279	EDC3	100	69.216	ENSSDUG00000021844	edc3	100	69.216	Seriola_dumerili
ENSPTRG00000007279	EDC3	100	58.949	ENSSDUG00000007671	EDC3	100	58.949	Seriola_dumerili
ENSPTRG00000007279	EDC3	100	69.216	ENSSLDG00000022046	edc3	100	69.216	Seriola_lalandi_dorsalis
ENSPTRG00000007279	EDC3	81	95.565	ENSSARG00000003907	EDC3	80	95.565	Sorex_araneus
ENSPTRG00000007279	EDC3	100	88.583	ENSSPUG00000008232	EDC3	100	88.583	Sphenodon_punctatus
ENSPTRG00000007279	EDC3	100	70.334	ENSSPAG00000010009	edc3	100	70.334	Stegastes_partitus
ENSPTRG00000007279	EDC3	100	57.588	ENSSPAG00000020327	EDC3	100	57.588	Stegastes_partitus
ENSPTRG00000007279	EDC3	100	97.638	ENSSSCG00000001903	EDC3	100	97.638	Sus_scrofa
ENSPTRG00000007279	EDC3	100	88.189	ENSTGUG00000004007	EDC3	100	88.189	Taeniopygia_guttata
ENSPTRG00000007279	EDC3	100	70.138	ENSTRUG00000017078	edc3	100	70.138	Takifugu_rubripes
ENSPTRG00000007279	EDC3	100	68.164	ENSTNIG00000016047	edc3	100	68.164	Tetraodon_nigroviridis
ENSPTRG00000007279	EDC3	100	97.441	ENSTTRG00000007990	EDC3	100	97.441	Tursiops_truncatus
ENSPTRG00000007279	EDC3	100	96.457	ENSUAMG00000026710	-	100	96.457	Ursus_americanus
ENSPTRG00000007279	EDC3	100	96.457	ENSUMAG00000005006	EDC3	96	96.457	Ursus_maritimus
ENSPTRG00000007279	EDC3	79	87.037	ENSVPAG00000003499	-	79	87.037	Vicugna_pacos
ENSPTRG00000007279	EDC3	100	96.850	ENSVVUG00000018601	EDC3	100	96.850	Vulpes_vulpes
ENSPTRG00000007279	EDC3	68	82.759	ENSXETG00000010622	edc3	99	83.908	Xenopus_tropicalis
ENSPTRG00000007279	EDC3	100	69.155	ENSXMAG00000007377	edc3	100	69.155	Xiphophorus_maculatus