EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000007460 (Gene tree)
Gene ID: 453650
Gene Symbol: BLM
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 109075 bases
Position: chr15:71521921-71630995
Accession: 7538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000012754	HRDC	PF00570.23	1e-11	1	1
ENSPTRP00000078799	BDHCT	PF08072.11	5.1e-21	1	1
ENSPTRP00000012754	BDHCT	PF08072.11	5.8e-21	1	1
ENSPTRP00000012754	DEAD	PF00270.29	2.7e-19	1	1
ENSPTRP00000078799	DEAD	PF00270.29	2.9e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000013759	-	4547	XM_009429835	ENSPTRP00000012754	1417 (aa)	XP_009428110	H2QA33
ENSPTRT00000096272	-	3861	-	ENSPTRP00000078799	1286 (aa)	-	A0A2I3SP55

Gene Model

Click here to download ENSPTRG00000007460's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03440	Homologous recombination	KEGG
ptr03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000007460's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000007460	BLM	100	98.518	ENSG00000197299	BLM	100	98.518	Homo_sapiens
ENSPTRG00000007460	BLM	50	73.306	ENSAPOG00000017966	blm	58	65.134	Acanthochromis_polyacanthus
ENSPTRG00000007460	BLM	100	81.505	ENSAMEG00000013843	BLM	100	81.013	Ailuropoda_melanoleuca
ENSPTRG00000007460	BLM	50	74.587	ENSACIG00000023762	blm	56	65.045	Amphilophus_citrinellus
ENSPTRG00000007460	BLM	50	72.895	ENSAOCG00000003318	blm	57	65.140	Amphiprion_ocellaris
ENSPTRG00000007460	BLM	50	72.690	ENSAPEG00000018105	blm	56	65.140	Amphiprion_percula
ENSPTRG00000007460	BLM	82	74.127	ENSATEG00000006421	blm	60	66.328	Anabas_testudineus
ENSPTRG00000007460	BLM	81	58.417	ENSAPLG00000006878	BLM	93	59.216	Anas_platyrhynchos
ENSPTRG00000007460	BLM	50	80.331	ENSACAG00000014275	BLM	55	71.429	Anolis_carolinensis
ENSPTRG00000007460	BLM	100	92.661	ENSANAG00000038415	BLM	100	92.378	Aotus_nancymaae
ENSPTRG00000007460	BLM	84	75.413	ENSACLG00000020354	blm	60	62.485	Astatotilapia_calliptera
ENSPTRG00000007460	BLM	83	50.797	ENSAMXG00000016970	blm	75	53.922	Astyanax_mexicanus
ENSPTRG00000007460	BLM	93	83.553	ENSBTAG00000020301	BLM	100	84.053	Bos_taurus
ENSPTRG00000007460	BLM	100	92.349	ENSCJAG00000009803	BLM	100	92.349	Callithrix_jacchus
ENSPTRG00000007460	BLM	100	82.158	ENSCAFG00000012385	BLM	100	82.087	Canis_familiaris
ENSPTRG00000007460	BLM	100	82.158	ENSCAFG00020016111	BLM	94	91.929	Canis_lupus_dingo
ENSPTRG00000007460	BLM	100	81.466	ENSCHIG00000010329	BLM	100	82.392	Capra_hircus
ENSPTRG00000007460	BLM	100	86.540	ENSTSYG00000012368	BLM	100	86.469	Carlito_syrichta
ENSPTRG00000007460	BLM	86	84.949	ENSCAPG00000017976	BLM	99	84.949	Cavia_aperea
ENSPTRG00000007460	BLM	100	78.443	ENSCPOG00000001761	BLM	100	77.324	Cavia_porcellus
ENSPTRG00000007460	BLM	100	91.281	ENSCCAG00000023069	BLM	100	91.281	Cebus_capucinus
ENSPTRG00000007460	BLM	100	95.766	ENSCATG00000040609	BLM	100	95.695	Cercocebus_atys
ENSPTRG00000007460	BLM	100	78.999	ENSCLAG00000012111	BLM	100	78.929	Chinchilla_lanigera
ENSPTRG00000007460	BLM	100	94.947	ENSCSAG00000017040	BLM	100	94.877	Chlorocebus_sabaeus
ENSPTRG00000007460	BLM	87	94.574	ENSCHOG00000006255	BLM	80	94.574	Choloepus_hoffmanni
ENSPTRG00000007460	BLM	89	54.787	ENSCPBG00000025000	BLM	96	73.810	Chrysemys_picta_bellii
ENSPTRG00000007460	BLM	87	98.889	ENSCANG00000034808	BLM	100	98.889	Colobus_angolensis_palliatus
ENSPTRG00000007460	BLM	100	78.481	ENSCGRG00001024897	Blm	100	78.481	Cricetulus_griseus_chok1gshd
ENSPTRG00000007460	BLM	74	74.607	ENSCGRG00000016261	Blm	97	74.244	Cricetulus_griseus_crigri
ENSPTRG00000007460	BLM	89	48.242	ENSCSEG00000013483	blm	80	53.199	Cynoglossus_semilaevis
ENSPTRG00000007460	BLM	50	73.922	ENSDARG00000077089	blm	56	65.570	Danio_rerio
ENSPTRG00000007460	BLM	99	80.869	ENSDNOG00000010159	BLM	99	80.799	Dasypus_novemcinctus
ENSPTRG00000007460	BLM	74	80.287	ENSDORG00000011033	Blm	100	80.191	Dipodomys_ordii
ENSPTRG00000007460	BLM	85	85.714	ENSETEG00000015019	BLM	77	85.714	Echinops_telfairi
ENSPTRG00000007460	BLM	100	82.581	ENSEASG00005006727	BLM	100	81.735	Equus_asinus_asinus
ENSPTRG00000007460	BLM	100	84.416	ENSECAG00000011405	BLM	100	83.578	Equus_caballus
ENSPTRG00000007460	BLM	98	74.711	ENSEEUG00000001434	BLM	98	74.711	Erinaceus_europaeus
ENSPTRG00000007460	BLM	89	75.359	ENSELUG00000019098	blm	50	75.359	Esox_lucius
ENSPTRG00000007460	BLM	100	80.832	ENSFCAG00000006087	BLM	100	80.832	Felis_catus
ENSPTRG00000007460	BLM	75	57.880	ENSFALG00000010981	BLM	85	56.897	Ficedula_albicollis
ENSPTRG00000007460	BLM	100	73.054	ENSFDAG00000012658	BLM	100	71.388	Fukomys_damarensis
ENSPTRG00000007460	BLM	57	66.197	ENSFHEG00000002553	blm	75	52.860	Fundulus_heteroclitus
ENSPTRG00000007460	BLM	82	71.488	ENSGMOG00000016431	blm	90	61.175	Gadus_morhua
ENSPTRG00000007460	BLM	83	55.547	ENSGALG00000008256	BLM	80	57.608	Gallus_gallus
ENSPTRG00000007460	BLM	54	73.717	ENSGAFG00000001117	blm	62	65.256	Gambusia_affinis
ENSPTRG00000007460	BLM	56	73.511	ENSGACG00000010863	blm	100	73.535	Gasterosteus_aculeatus
ENSPTRG00000007460	BLM	88	52.256	ENSGAGG00000005383	BLM	93	78.454	Gopherus_agassizii
ENSPTRG00000007460	BLM	100	97.953	ENSGGOG00000007710	BLM	100	97.953	Gorilla_gorilla
ENSPTRG00000007460	BLM	82	75.413	ENSHBUG00000015943	blm	60	62.529	Haplochromis_burtoni
ENSPTRG00000007460	BLM	100	80.915	ENSHGLG00000013231	BLM	99	80.338	Heterocephalus_glaber_female
ENSPTRG00000007460	BLM	73	55.534	ENSHCOG00000011455	blm	99	54.175	Hippocampus_comes
ENSPTRG00000007460	BLM	81	51.337	ENSIPUG00000000529	blm	68	65.223	Ictalurus_punctatus
ENSPTRG00000007460	BLM	100	82.138	ENSSTOG00000005000	BLM	100	82.489	Ictidomys_tridecemlineatus
ENSPTRG00000007460	BLM	66	87.342	ENSJJAG00000016322	Blm	94	87.184	Jaculus_jaculus
ENSPTRG00000007460	BLM	99	50.812	ENSLACG00000006490	BLM	75	57.600	Latimeria_chalumnae
ENSPTRG00000007460	BLM	62	66.904	ENSLOCG00000014302	blm	67	62.102	Lepisosteus_oculatus
ENSPTRG00000007460	BLM	100	95.766	ENSMFAG00000042982	BLM	100	95.695	Macaca_fascicularis
ENSPTRG00000007460	BLM	100	95.836	ENSMMUG00000019526	BLM	100	95.766	Macaca_mulatta
ENSPTRG00000007460	BLM	99	92.216	ENSMNEG00000031251	BLM	99	91.435	Macaca_nemestrina
ENSPTRG00000007460	BLM	100	93.296	ENSMLEG00000032934	BLM	100	93.225	Mandrillus_leucophaeus
ENSPTRG00000007460	BLM	50	75.154	ENSMAMG00000008726	blm	76	54.747	Mastacembelus_armatus
ENSPTRG00000007460	BLM	87	69.485	ENSMZEG00005022323	blm	64	62.353	Maylandia_zebra
ENSPTRG00000007460	BLM	100	78.371	ENSMAUG00000008953	Blm	99	78.230	Mesocricetus_auratus
ENSPTRG00000007460	BLM	100	86.479	ENSMICG00000034442	BLM	100	86.338	Microcebus_murinus
ENSPTRG00000007460	BLM	100	76.566	ENSMOCG00000016367	Blm	99	76.297	Microtus_ochrogaster
ENSPTRG00000007460	BLM	63	73.320	ENSMMOG00000006959	blm	61	65.217	Mola_mola
ENSPTRG00000007460	BLM	99	64.466	ENSMODG00000019449	BLM	99	63.921	Monodelphis_domestica
ENSPTRG00000007460	BLM	72	67.794	ENSMALG00000007323	blm	63	63.325	Monopterus_albus
ENSPTRG00000007460	BLM	100	75.245	MGP_CAROLIEiJ_G0029907	Blm	100	74.772	Mus_caroli
ENSPTRG00000007460	BLM	100	75.576	ENSMUSG00000030528	Blm	100	75.105	Mus_musculus
ENSPTRG00000007460	BLM	100	76.491	MGP_PahariEiJ_G0013129	Blm	100	76.017	Mus_pahari
ENSPTRG00000007460	BLM	100	76.087	MGP_SPRETEiJ_G0031009	Blm	100	75.526	Mus_spretus
ENSPTRG00000007460	BLM	87	80.088	ENSMPUG00000015657	BLM	99	80.282	Mustela_putorius_furo
ENSPTRG00000007460	BLM	100	79.621	ENSMLUG00000014697	BLM	100	79.902	Myotis_lucifugus
ENSPTRG00000007460	BLM	100	80.620	ENSNGAG00000001275	Blm	100	79.845	Nannospalax_galili
ENSPTRG00000007460	BLM	82	75.413	ENSNBRG00000019702	blm	61	65.941	Neolamprologus_brichardi
ENSPTRG00000007460	BLM	100	95.836	ENSNLEG00000012087	BLM	100	95.836	Nomascus_leucogenys
ENSPTRG00000007460	BLM	99	61.119	ENSMEUG00000007253	BLM	99	60.979	Notamacropus_eugenii
ENSPTRG00000007460	BLM	95	93.981	ENSOPRG00000011667	BLM	95	85.950	Ochotona_princeps
ENSPTRG00000007460	BLM	74	78.407	ENSODEG00000015373	BLM	100	78.407	Octodon_degus
ENSPTRG00000007460	BLM	54	82.292	ENSOANG00000009316	-	99	82.185	Ornithorhynchus_anatinus
ENSPTRG00000007460	BLM	99	75.123	ENSOCUG00000013969	BLM	99	75.123	Oryctolagus_cuniculus
ENSPTRG00000007460	BLM	83	73.717	ENSORLG00000008110	blm	61	66.158	Oryzias_latipes
ENSPTRG00000007460	BLM	83	73.717	ENSORLG00020004812	blm	57	66.581	Oryzias_latipes_hni
ENSPTRG00000007460	BLM	83	73.922	ENSORLG00015018640	blm	62	66.837	Oryzias_latipes_hsok
ENSPTRG00000007460	BLM	50	73.306	ENSOMEG00000023545	blm	60	65.985	Oryzias_melastigma
ENSPTRG00000007460	BLM	100	80.390	ENSOGAG00000005708	BLM	100	78.576	Otolemur_garnettii
ENSPTRG00000007460	BLM	100	80.656	ENSOARG00000012875	BLM	100	80.447	Ovis_aries
ENSPTRG00000007460	BLM	100	99.365	ENSPPAG00000032173	BLM	100	99.365	Pan_paniscus
ENSPTRG00000007460	BLM	100	80.832	ENSPPRG00000002471	BLM	100	80.832	Panthera_pardus
ENSPTRG00000007460	BLM	100	80.507	ENSPTIG00000016168	BLM	100	80.507	Panthera_tigris_altaica
ENSPTRG00000007460	BLM	100	95.907	ENSPANG00000018572	BLM	100	95.836	Papio_anubis
ENSPTRG00000007460	BLM	87	68.991	ENSPKIG00000008954	blm	62	62.915	Paramormyrops_kingsleyae
ENSPTRG00000007460	BLM	51	67.125	ENSPMGG00000006629	blm	80	67.263	Periophthalmus_magnuspinnatus
ENSPTRG00000007460	BLM	100	77.778	ENSPEMG00000017348	Blm	100	77.356	Peromyscus_maniculatus_bairdii
ENSPTRG00000007460	BLM	50	59.161	ENSPMAG00000000445	blm	96	59.301	Petromyzon_marinus
ENSPTRG00000007460	BLM	99	63.531	ENSPCIG00000006609	BLM	99	63.327	Phascolarctos_cinereus
ENSPTRG00000007460	BLM	54	73.922	ENSPFOG00000005059	blm	59	65.256	Poecilia_formosa
ENSPTRG00000007460	BLM	54	73.922	ENSPLAG00000017344	blm	59	65.000	Poecilia_latipinna
ENSPTRG00000007460	BLM	54	73.922	ENSPMEG00000000321	blm	59	65.256	Poecilia_mexicana
ENSPTRG00000007460	BLM	54	73.511	ENSPREG00000007715	blm	59	65.000	Poecilia_reticulata
ENSPTRG00000007460	BLM	100	97.006	ENSPPYG00000006784	BLM	100	95.342	Pongo_abelii
ENSPTRG00000007460	BLM	73	93.939	ENSPCAG00000008960	BLM	73	93.939	Procavia_capensis
ENSPTRG00000007460	BLM	100	82.635	ENSPCOG00000000439	BLM	100	82.635	Propithecus_coquereli
ENSPTRG00000007460	BLM	81	94.888	ENSPVAG00000011642	BLM	88	94.888	Pteropus_vampyrus
ENSPTRG00000007460	BLM	59	51.647	ENSPNYG00000010956	blm	57	51.176	Pundamilia_nyererei
ENSPTRG00000007460	BLM	57	68.486	ENSPNAG00000011714	blm	59	64.009	Pygocentrus_nattereri
ENSPTRG00000007460	BLM	100	74.877	ENSRNOG00000011213	Blm	100	74.173	Rattus_norvegicus
ENSPTRG00000007460	BLM	100	93.413	ENSRBIG00000029656	BLM	100	95.969	Rhinopithecus_bieti
ENSPTRG00000007460	BLM	100	94.707	ENSRROG00000037871	BLM	100	94.637	Rhinopithecus_roxellana
ENSPTRG00000007460	BLM	100	91.135	ENSSBOG00000030957	BLM	100	91.815	Saimiri_boliviensis_boliviensis
ENSPTRG00000007460	BLM	99	64.673	ENSSHAG00000007988	BLM	99	64.812	Sarcophilus_harrisii
ENSPTRG00000007460	BLM	50	73.554	ENSSFOG00015015462	blm	63	64.872	Scleropages_formosus
ENSPTRG00000007460	BLM	71	64.533	ENSSMAG00000001120	blm	79	62.791	Scophthalmus_maximus
ENSPTRG00000007460	BLM	50	74.127	ENSSLDG00000000634	blm	56	65.732	Seriola_lalandi_dorsalis
ENSPTRG00000007460	BLM	94	73.054	ENSSARG00000006398	BLM	100	70.456	Sorex_araneus
ENSPTRG00000007460	BLM	74	59.091	ENSSPUG00000000013	BLM	93	58.712	Sphenodon_punctatus
ENSPTRG00000007460	BLM	50	73.306	ENSSPAG00000013999	blm	55	66.158	Stegastes_partitus
ENSPTRG00000007460	BLM	100	81.831	ENSSSCG00000001816	BLM	99	82.666	Sus_scrofa
ENSPTRG00000007460	BLM	77	54.640	ENSTGUG00000009959	-	98	50.834	Taeniopygia_guttata
ENSPTRG00000007460	BLM	60	72.485	ENSTRUG00000019860	blm	60	61.111	Takifugu_rubripes
ENSPTRG00000007460	BLM	77	90.476	ENSTBEG00000006706	BLM	77	84.688	Tupaia_belangeri
ENSPTRG00000007460	BLM	100	83.662	ENSTTRG00000016386	BLM	100	84.014	Tursiops_truncatus
ENSPTRG00000007460	BLM	100	81.761	ENSUMAG00000009105	BLM	97	92.476	Ursus_maritimus
ENSPTRG00000007460	BLM	99	80.620	ENSVPAG00000000085	BLM	99	80.409	Vicugna_pacos
ENSPTRG00000007460	BLM	95	94.240	ENSVVUG00000006402	BLM	100	89.423	Vulpes_vulpes
ENSPTRG00000007460	BLM	99	51.191	ENSXETG00000007847	blm	54	72.237	Xenopus_tropicalis
ENSPTRG00000007460	BLM	50	67.967	ENSXCOG00000020227	blm	54	61.204	Xiphophorus_couchianus
ENSPTRG00000007460	BLM	50	73.101	ENSXMAG00000002951	blm	56	64.744	Xiphophorus_maculatus