EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000007478 (Gene tree)
Gene ID: 101057134
Gene Symbol: CHD2
Alias: -
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 141782 bases
Position: chr15:73726356-73868137
Accession: 3564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000012779	ResIII	PF04851.15	4.4e-08	1	1
ENSPTRP00000070968	ResIII	PF04851.15	4.4e-08	1	1
ENSPTRP00000066488	ResIII	PF04851.15	4.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000077591	-	96	-	ENSPTRP00000069941	31 (aa)	-	A0A2I3RYZ3
ENSPTRT00000013786	-	5379	-	ENSPTRP00000012779	1792 (aa)	-	H2QA45
ENSPTRT00000107396	-	9391	XM_003952732	ENSPTRP00000066488	1828 (aa)	XP_003952781	A0A2I3RQ86
ENSPTRT00000107397	-	1278	XM_009429880	ENSPTRP00000085625	425 (aa)	-	A0A2I3T8P9
ENSPTRT00000081143	-	5427	-	ENSPTRP00000070968	1808 (aa)	-	A0A2I3S200

Gene Model

Click here to download ENSPTRG00000007478's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000007478's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000007478	CHD2	91	59.725	ENSPTRG00000017103	CHD1	96	57.159
ENSPTRG00000007478	CHD2	60	32.463	ENSPTRG00000013504	CHD6	84	39.596

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000007478	CHD2	100	99.945	ENSG00000173575	CHD2	100	100.000	Homo_sapiens
ENSPTRG00000007478	CHD2	96	72.748	ENSAPOG00000008913	chd2	100	71.873	Acanthochromis_polyacanthus
ENSPTRG00000007478	CHD2	63	98.958	ENSAMEG00000010805	-	100	98.958	Ailuropoda_melanoleuca
ENSPTRG00000007478	CHD2	96	70.196	ENSAOCG00000016332	chd2	100	69.355	Amphiprion_ocellaris
ENSPTRG00000007478	CHD2	96	72.549	ENSAPEG00000016676	chd2	100	71.731	Amphiprion_percula
ENSPTRG00000007478	CHD2	96	72.310	ENSATEG00000005246	chd2	100	71.514	Anabas_testudineus
ENSPTRG00000007478	CHD2	100	87.941	ENSAPLG00000011141	-	100	87.996	Anas_platyrhynchos
ENSPTRG00000007478	CHD2	98	80.903	ENSACAG00000000088	-	99	80.575	Anolis_carolinensis
ENSPTRG00000007478	CHD2	100	99.344	ENSANAG00000024017	-	100	99.344	Aotus_nancymaae
ENSPTRG00000007478	CHD2	100	99.125	ENSCJAG00000020444	-	100	99.125	Callithrix_jacchus
ENSPTRG00000007478	CHD2	99	98.507	ENSCAFG00000010998	CHD2	100	98.477	Canis_familiaris
ENSPTRG00000007478	CHD2	99	95.277	ENSCHIG00000022261	-	99	95.277	Capra_hircus
ENSPTRG00000007478	CHD2	100	98.687	ENSTSYG00000003272	-	100	98.687	Carlito_syrichta
ENSPTRG00000007478	CHD2	93	97.192	ENSCPOG00000005800	-	100	97.192	Cavia_porcellus
ENSPTRG00000007478	CHD2	100	99.344	ENSCCAG00000035304	-	100	99.344	Cebus_capucinus
ENSPTRG00000007478	CHD2	100	99.836	ENSCATG00000031069	-	100	99.836	Cercocebus_atys
ENSPTRG00000007478	CHD2	100	97.593	ENSCLAG00000016269	-	100	97.593	Chinchilla_lanigera
ENSPTRG00000007478	CHD2	100	99.891	ENSCSAG00000017007	-	100	99.891	Chlorocebus_sabaeus
ENSPTRG00000007478	CHD2	78	100.000	ENSCHOG00000000608	-	82	100.000	Choloepus_hoffmanni
ENSPTRG00000007478	CHD2	82	88.082	ENSCPBG00000018049	-	97	91.346	Chrysemys_picta_bellii
ENSPTRG00000007478	CHD2	74	54.414	ENSCSAVG00000007580	-	93	60.314	Ciona_savignyi
ENSPTRG00000007478	CHD2	100	99.781	ENSCANG00000038126	-	100	99.781	Colobus_angolensis_palliatus
ENSPTRG00000007478	CHD2	100	97.429	ENSCGRG00001006649	Chd2	100	97.429	Cricetulus_griseus_chok1gshd
ENSPTRG00000007478	CHD2	100	97.429	ENSCGRG00000018154	Chd2	100	97.429	Cricetulus_griseus_crigri
ENSPTRG00000007478	CHD2	93	66.585	ENSCSEG00000003646	chd2	94	66.038	Cynoglossus_semilaevis
ENSPTRG00000007478	CHD2	100	64.267	ENSCVAG00000002427	chd2	99	71.000	Cyprinodon_variegatus
ENSPTRG00000007478	CHD2	96	70.258	ENSDARG00000060687	chd2	100	71.470	Danio_rerio
ENSPTRG00000007478	CHD2	99	97.757	ENSDNOG00000009796	-	100	97.757	Dasypus_novemcinctus
ENSPTRG00000007478	CHD2	50	74.468	ENSEBUG00000014994	chd2	83	74.468	Eptatretus_burgeri
ENSPTRG00000007478	CHD2	99	98.728	ENSEASG00005015526	-	99	100.000	Equus_asinus_asinus
ENSPTRG00000007478	CHD2	95	72.188	ENSELUG00000017981	chd2	100	70.815	Esox_lucius
ENSPTRG00000007478	CHD2	100	89.179	ENSFALG00000010369	-	100	89.070	Ficedula_albicollis
ENSPTRG00000007478	CHD2	100	97.538	ENSFDAG00000020651	-	100	97.538	Fukomys_damarensis
ENSPTRG00000007478	CHD2	88	71.508	ENSFHEG00000002119	chd2	91	71.385	Fundulus_heteroclitus
ENSPTRG00000007478	CHD2	94	69.053	ENSGMOG00000002890	chd2	99	70.456	Gadus_morhua
ENSPTRG00000007478	CHD2	100	88.443	ENSGALG00000006949	CHD2	100	88.443	Gallus_gallus
ENSPTRG00000007478	CHD2	96	70.051	ENSGAFG00000001905	chd2	97	69.570	Gambusia_affinis
ENSPTRG00000007478	CHD2	91	70.933	ENSGACG00000013246	chd2	99	70.383	Gasterosteus_aculeatus
ENSPTRG00000007478	CHD2	81	90.302	ENSGAGG00000013176	-	95	97.753	Gopherus_agassizii
ENSPTRG00000007478	CHD2	100	98.414	ENSGGOG00000015677	CHD2	100	98.414	Gorilla_gorilla
ENSPTRG00000007478	CHD2	96	72.840	ENSHBUG00000017947	chd2	100	71.598	Haplochromis_burtoni
ENSPTRG00000007478	CHD2	100	97.155	ENSHGLG00000004435	CHD2	100	97.155	Heterocephalus_glaber_female
ENSPTRG00000007478	CHD2	100	96.499	ENSHGLG00100016376	-	100	96.499	Heterocephalus_glaber_male
ENSPTRG00000007478	CHD2	96	67.079	ENSHCOG00000008855	chd2	98	66.430	Hippocampus_comes
ENSPTRG00000007478	CHD2	73	73.097	ENSIPUG00000000488	chd2	99	67.668	Ictalurus_punctatus
ENSPTRG00000007478	CHD2	100	98.632	ENSSTOG00000001270	-	100	98.632	Ictidomys_tridecemlineatus
ENSPTRG00000007478	CHD2	100	97.429	ENSJJAG00000000213	Chd2	100	97.429	Jaculus_jaculus
ENSPTRG00000007478	CHD2	84	72.463	ENSKMAG00000015849	chd2	99	73.045	Kryptolebias_marmoratus
ENSPTRG00000007478	CHD2	75	97.389	ENSLAFG00000016885	-	100	97.389	Loxodonta_africana
ENSPTRG00000007478	CHD2	100	99.945	ENSMFAG00000033343	-	100	99.945	Macaca_fascicularis
ENSPTRG00000007478	CHD2	100	99.945	ENSMMUG00000011782	-	100	99.945	Macaca_mulatta
ENSPTRG00000007478	CHD2	100	99.563	ENSMNEG00000036875	-	100	99.563	Macaca_nemestrina
ENSPTRG00000007478	CHD2	100	99.891	ENSMLEG00000035026	-	100	99.891	Mandrillus_leucophaeus
ENSPTRG00000007478	CHD2	96	72.027	ENSMAMG00000009082	chd2	100	70.746	Mastacembelus_armatus
ENSPTRG00000007478	CHD2	99	88.316	ENSMGAG00000008966	-	99	88.264	Meleagris_gallopavo
ENSPTRG00000007478	CHD2	100	97.046	ENSMICG00000000332	-	100	97.046	Microcebus_murinus
ENSPTRG00000007478	CHD2	100	97.102	ENSMOCG00000015124	Chd2	100	97.102	Microtus_ochrogaster
ENSPTRG00000007478	CHD2	100	92.437	ENSMODG00000013158	-	100	92.601	Monodelphis_domestica
ENSPTRG00000007478	CHD2	100	96.718	MGP_CAROLIEiJ_G0029860	Chd2	100	96.718	Mus_caroli
ENSPTRG00000007478	CHD2	100	96.444	ENSMUSG00000078671	Chd2	100	96.444	Mus_musculus
ENSPTRG00000007478	CHD2	100	96.720	MGP_PahariEiJ_G0013082	Chd2	100	96.720	Mus_pahari
ENSPTRG00000007478	CHD2	100	96.554	MGP_SPRETEiJ_G0030962	Chd2	100	96.554	Mus_spretus
ENSPTRG00000007478	CHD2	100	98.523	ENSMPUG00000017577	-	100	98.523	Mustela_putorius_furo
ENSPTRG00000007478	CHD2	100	95.277	ENSMLUG00000009292	-	100	95.277	Myotis_lucifugus
ENSPTRG00000007478	CHD2	100	98.085	ENSNGAG00000010792	Chd2	100	98.085	Nannospalax_galili
ENSPTRG00000007478	CHD2	96	72.032	ENSNBRG00000020591	chd2	90	74.800	Neolamprologus_brichardi
ENSPTRG00000007478	CHD2	100	97.210	ENSNLEG00000012349	-	100	97.210	Nomascus_leucogenys
ENSPTRG00000007478	CHD2	71	88.699	ENSMEUG00000001522	-	76	89.764	Notamacropus_eugenii
ENSPTRG00000007478	CHD2	100	96.499	ENSODEG00000016028	-	100	96.499	Octodon_degus
ENSPTRG00000007478	CHD2	96	72.727	ENSONIG00000015136	chd2	100	72.028	Oreochromis_niloticus
ENSPTRG00000007478	CHD2	88	83.220	ENSOANG00000004385	-	99	88.937	Ornithorhynchus_anatinus
ENSPTRG00000007478	CHD2	100	86.579	ENSOCUG00000001628	-	99	97.573	Oryctolagus_cuniculus
ENSPTRG00000007478	CHD2	96	71.854	ENSORLG00000008403	chd2	100	70.429	Oryzias_latipes
ENSPTRG00000007478	CHD2	96	72.103	ENSORLG00020004138	chd2	100	70.645	Oryzias_latipes_hni
ENSPTRG00000007478	CHD2	100	64.428	ENSOMEG00000005831	chd2	100	64.817	Oryzias_melastigma
ENSPTRG00000007478	CHD2	100	96.389	ENSOGAG00000010399	-	100	96.389	Otolemur_garnettii
ENSPTRG00000007478	CHD2	99	97.020	ENSOARG00000010343	-	100	95.678	Ovis_aries
ENSPTRG00000007478	CHD2	100	98.908	ENSPPAG00000030381	-	100	98.908	Pan_paniscus
ENSPTRG00000007478	CHD2	100	96.937	ENSPANG00000033355	-	100	96.937	Papio_anubis
ENSPTRG00000007478	CHD2	99	69.759	ENSPKIG00000000495	chd2	100	71.321	Paramormyrops_kingsleyae
ENSPTRG00000007478	CHD2	84	70.102	ENSPMGG00000009941	chd2	99	70.660	Periophthalmus_magnuspinnatus
ENSPTRG00000007478	CHD2	100	97.374	ENSPEMG00000019507	Chd2	100	97.374	Peromyscus_maniculatus_bairdii
ENSPTRG00000007478	CHD2	91	93.178	ENSPCIG00000009417	-	100	92.207	Phascolarctos_cinereus
ENSPTRG00000007478	CHD2	96	72.860	ENSPFOG00000007050	chd2	100	72.028	Poecilia_formosa
ENSPTRG00000007478	CHD2	96	73.058	ENSPLAG00000005067	chd2	100	72.327	Poecilia_latipinna
ENSPTRG00000007478	CHD2	96	72.804	ENSPMEG00000019628	chd2	100	71.974	Poecilia_mexicana
ENSPTRG00000007478	CHD2	100	98.687	ENSPPYG00000006799	-	100	98.687	Pongo_abelii
ENSPTRG00000007478	CHD2	100	98.742	ENSPCOG00000028084	-	100	98.742	Propithecus_coquereli
ENSPTRG00000007478	CHD2	69	73.781	ENSPNAG00000016719	chd2	99	69.520	Pygocentrus_nattereri
ENSPTRG00000007478	CHD2	100	96.663	ENSRNOG00000012716	Chd2	100	96.663	Rattus_norvegicus
ENSPTRG00000007478	CHD2	100	97.594	ENSRBIG00000036875	-	100	97.594	Rhinopithecus_bieti
ENSPTRG00000007478	CHD2	100	99.672	ENSRROG00000041087	-	100	99.672	Rhinopithecus_roxellana
ENSPTRG00000007478	CHD2	100	99.508	ENSSBOG00000023754	-	100	99.508	Saimiri_boliviensis_boliviensis
ENSPTRG00000007478	CHD2	100	92.546	ENSSHAG00000012513	-	100	92.764	Sarcophilus_harrisii
ENSPTRG00000007478	CHD2	100	73.222	ENSSFOG00015023759	chd2	100	73.006	Scleropages_formosus
ENSPTRG00000007478	CHD2	96	71.132	ENSSMAG00000001726	chd2	100	70.096	Scophthalmus_maximus
ENSPTRG00000007478	CHD2	96	71.008	ENSSLDG00000001146	chd2	100	70.293	Seriola_lalandi_dorsalis
ENSPTRG00000007478	CHD2	77	98.333	ENSSARG00000014112	-	82	98.333	Sorex_araneus
ENSPTRG00000007478	CHD2	99	83.866	ENSSPUG00000011266	-	99	84.283	Sphenodon_punctatus
ENSPTRG00000007478	CHD2	100	98.742	ENSSSCG00000002266	-	100	98.742	Sus_scrofa
ENSPTRG00000007478	CHD2	100	89.095	ENSTGUG00000008540	-	100	89.040	Taeniopygia_guttata
ENSPTRG00000007478	CHD2	83	68.972	ENSTRUG00000008842	chd2	87	68.052	Takifugu_rubripes
ENSPTRG00000007478	CHD2	88	72.429	ENSTNIG00000010760	chd2	98	72.057	Tetraodon_nigroviridis
ENSPTRG00000007478	CHD2	71	97.797	ENSTBEG00000017730	-	83	97.797	Tupaia_belangeri
ENSPTRG00000007478	CHD2	95	99.091	ENSTTRG00000000430	-	95	99.091	Tursiops_truncatus
ENSPTRG00000007478	CHD2	100	95.842	ENSUMAG00000000083	-	100	95.350	Ursus_maritimus
ENSPTRG00000007478	CHD2	86	97.455	ENSVPAG00000009645	-	90	97.455	Vicugna_pacos
ENSPTRG00000007478	CHD2	90	73.578	ENSXETG00000024129	chd2	92	80.284	Xenopus_tropicalis
ENSPTRG00000007478	CHD2	96	69.678	ENSXCOG00000020255	chd2	99	69.405	Xiphophorus_couchianus
ENSPTRG00000007478	CHD2	96	72.946	ENSXMAG00000002707	chd2	100	72.043	Xiphophorus_maculatus