EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000007565 (Gene tree)
Gene ID: 453807
Gene Symbol: RPUSD1
Alias: -
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 6147 bases
Position: chr16:885327-891473
Accession: 5914
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000012926	PseudoU_synth_2	PF00849.22	4.5e-24	1	1
ENSPTRP00000072605	PseudoU_synth_2	PF00849.22	2.9e-12	1	1
ENSPTRP00000071383	PseudoU_synth_2	PF00849.22	1.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000087405	-	666	-	ENSPTRP00000071383	221 (aa)	-	A0A2I3S310
ENSPTRT00000013953	-	2068	XM_016929105	ENSPTRP00000012926	312 (aa)	XP_016784594	H2QA88
ENSPTRT00000083444	-	396	-	ENSPTRP00000072605	131 (aa)	-	A0A2I3S6Z0

Gene Model

Click here to download ENSPTRG00000007565's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000007565's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000007565	RPUSD1	100	99.038	ENSG00000007376	RPUSD1	100	99.038	Homo_sapiens
ENSPTRG00000007565	RPUSD1	98	56.393	ENSAPOG00000022221	rpusd1	98	55.519	Acanthochromis_polyacanthus
ENSPTRG00000007565	RPUSD1	100	80.769	ENSAMEG00000007461	RPUSD1	100	80.128	Ailuropoda_melanoleuca
ENSPTRG00000007565	RPUSD1	98	57.190	ENSACIG00000015863	rpusd1	98	57.468	Amphilophus_citrinellus
ENSPTRG00000007565	RPUSD1	98	55.738	ENSAOCG00000021975	rpusd1	95	56.090	Amphiprion_ocellaris
ENSPTRG00000007565	RPUSD1	98	55.410	ENSAPEG00000001316	rpusd1	95	55.769	Amphiprion_percula
ENSPTRG00000007565	RPUSD1	88	66.957	ENSATEG00000002984	rpusd1	98	57.282	Anabas_testudineus
ENSPTRG00000007565	RPUSD1	94	46.009	ENSAPLG00000012316	RPUSD1	99	58.704	Anas_platyrhynchos
ENSPTRG00000007565	RPUSD1	99	65.161	ENSACAG00000008953	RPUSD1	100	63.694	Anolis_carolinensis
ENSPTRG00000007565	RPUSD1	100	93.590	ENSANAG00000024709	RPUSD1	100	93.590	Aotus_nancymaae
ENSPTRG00000007565	RPUSD1	98	58.252	ENSACLG00000013692	rpusd1	98	57.929	Astatotilapia_calliptera
ENSPTRG00000007565	RPUSD1	99	57.282	ENSAMXG00000019802	rpusd1	100	56.688	Astyanax_mexicanus
ENSPTRG00000007565	RPUSD1	100	85.256	ENSBTAG00000000179	RPUSD1	100	85.256	Bos_taurus
ENSPTRG00000007565	RPUSD1	100	92.949	ENSCJAG00000012253	RPUSD1	100	92.949	Callithrix_jacchus
ENSPTRG00000007565	RPUSD1	99	80.707	ENSCAFG00000019614	RPUSD1	99	81.672	Canis_familiaris
ENSPTRG00000007565	RPUSD1	99	80.707	ENSCAFG00020008891	RPUSD1	99	81.672	Canis_lupus_dingo
ENSPTRG00000007565	RPUSD1	100	83.974	ENSCHIG00000012872	RPUSD1	100	83.974	Capra_hircus
ENSPTRG00000007565	RPUSD1	100	90.840	ENSTSYG00000036934	RPUSD1	100	90.840	Carlito_syrichta
ENSPTRG00000007565	RPUSD1	100	81.731	ENSCAPG00000014219	RPUSD1	100	81.090	Cavia_aperea
ENSPTRG00000007565	RPUSD1	100	81.731	ENSCPOG00000034604	RPUSD1	100	81.090	Cavia_porcellus
ENSPTRG00000007565	RPUSD1	100	93.910	ENSCCAG00000034385	RPUSD1	100	93.910	Cebus_capucinus
ENSPTRG00000007565	RPUSD1	100	96.947	ENSCATG00000042983	RPUSD1	100	96.947	Cercocebus_atys
ENSPTRG00000007565	RPUSD1	100	81.090	ENSCLAG00000013966	RPUSD1	100	81.410	Chinchilla_lanigera
ENSPTRG00000007565	RPUSD1	100	96.154	ENSCSAG00000012121	RPUSD1	100	96.154	Chlorocebus_sabaeus
ENSPTRG00000007565	RPUSD1	99	65.696	ENSCPBG00000021101	RPUSD1	99	65.696	Chrysemys_picta_bellii
ENSPTRG00000007565	RPUSD1	100	96.183	ENSCANG00000028576	RPUSD1	100	96.441	Colobus_angolensis_palliatus
ENSPTRG00000007565	RPUSD1	100	79.808	ENSCGRG00001014253	Rpusd1	100	78.846	Cricetulus_griseus_chok1gshd
ENSPTRG00000007565	RPUSD1	100	79.808	ENSCGRG00000017995	Rpusd1	100	78.846	Cricetulus_griseus_crigri
ENSPTRG00000007565	RPUSD1	89	66.379	ENSCSEG00000018512	rpusd1	100	55.663	Cynoglossus_semilaevis
ENSPTRG00000007565	RPUSD1	79	73.786	ENSCSEG00000007648	-	100	73.786	Cynoglossus_semilaevis
ENSPTRG00000007565	RPUSD1	88	66.957	ENSCVAG00000022746	rpusd1	98	55.519	Cyprinodon_variegatus
ENSPTRG00000007565	RPUSD1	89	72.414	ENSDARG00000060192	rpusd1	100	58.786	Danio_rerio
ENSPTRG00000007565	RPUSD1	100	83.333	ENSDNOG00000003721	RPUSD1	100	83.333	Dasypus_novemcinctus
ENSPTRG00000007565	RPUSD1	100	83.013	ENSDORG00000026656	Rpusd1	100	83.333	Dipodomys_ordii
ENSPTRG00000007565	RPUSD1	99	45.593	ENSEBUG00000008767	rpusd1	94	45.846	Eptatretus_burgeri
ENSPTRG00000007565	RPUSD1	99	84.444	ENSEASG00005018421	RPUSD1	75	85.714	Equus_asinus_asinus
ENSPTRG00000007565	RPUSD1	79	72.816	ENSELUG00000014307	rpusd1	88	51.084	Esox_lucius
ENSPTRG00000007565	RPUSD1	100	82.443	ENSFCAG00000010359	RPUSD1	99	82.443	Felis_catus
ENSPTRG00000007565	RPUSD1	89	76.724	ENSFALG00000003211	RPUSD1	100	63.344	Ficedula_albicollis
ENSPTRG00000007565	RPUSD1	100	83.333	ENSFDAG00000013398	RPUSD1	100	82.372	Fukomys_damarensis
ENSPTRG00000007565	RPUSD1	98	55.738	ENSFHEG00000004736	rpusd1	98	55.738	Fundulus_heteroclitus
ENSPTRG00000007565	RPUSD1	78	73.529	ENSGMOG00000010756	rpusd1	98	56.393	Gadus_morhua
ENSPTRG00000007565	RPUSD1	99	63.548	ENSGALG00000005315	RPUSD1	100	63.430	Gallus_gallus
ENSPTRG00000007565	RPUSD1	98	56.536	ENSGAFG00000009886	rpusd1	98	56.066	Gambusia_affinis
ENSPTRG00000007565	RPUSD1	86	67.257	ENSGACG00000014276	rpusd1	97	56.106	Gasterosteus_aculeatus
ENSPTRG00000007565	RPUSD1	79	85.437	ENSGAGG00000004181	RPUSD1	99	65.049	Gopherus_agassizii
ENSPTRG00000007565	RPUSD1	100	99.359	ENSGGOG00000013997	RPUSD1	100	99.359	Gorilla_gorilla
ENSPTRG00000007565	RPUSD1	98	57.929	ENSHBUG00000023728	rpusd1	98	57.605	Haplochromis_burtoni
ENSPTRG00000007565	RPUSD1	100	81.410	ENSHGLG00000002595	RPUSD1	100	81.410	Heterocephalus_glaber_female
ENSPTRG00000007565	RPUSD1	100	81.410	ENSHGLG00100014303	RPUSD1	100	81.410	Heterocephalus_glaber_male
ENSPTRG00000007565	RPUSD1	79	75.728	ENSHCOG00000020005	-	97	75.728	Hippocampus_comes
ENSPTRG00000007565	RPUSD1	98	57.190	ENSHCOG00000002390	rpusd1	99	56.026	Hippocampus_comes
ENSPTRG00000007565	RPUSD1	79	80.583	ENSIPUG00000001570	rpusd1	99	60.065	Ictalurus_punctatus
ENSPTRG00000007565	RPUSD1	100	85.577	ENSSTOG00000004276	RPUSD1	100	84.936	Ictidomys_tridecemlineatus
ENSPTRG00000007565	RPUSD1	100	83.333	ENSJJAG00000015696	Rpusd1	100	82.692	Jaculus_jaculus
ENSPTRG00000007565	RPUSD1	98	56.026	ENSKMAG00000017287	rpusd1	98	56.393	Kryptolebias_marmoratus
ENSPTRG00000007565	RPUSD1	98	56.721	ENSLBEG00000013354	RPUSD1	98	56.721	Labrus_bergylta
ENSPTRG00000007565	RPUSD1	98	56.721	ENSLBEG00000022502	rpusd1	98	56.721	Labrus_bergylta
ENSPTRG00000007565	RPUSD1	99	61.165	ENSLACG00000008869	RPUSD1	99	61.364	Latimeria_chalumnae
ENSPTRG00000007565	RPUSD1	92	70.000	ENSLOCG00000005682	rpusd1	99	70.968	Lepisosteus_oculatus
ENSPTRG00000007565	RPUSD1	100	79.808	ENSLAFG00000002115	RPUSD1	100	79.808	Loxodonta_africana
ENSPTRG00000007565	RPUSD1	100	96.947	ENSMFAG00000003961	RPUSD1	100	96.947	Macaca_fascicularis
ENSPTRG00000007565	RPUSD1	100	96.947	ENSMMUG00000000842	RPUSD1	100	96.947	Macaca_mulatta
ENSPTRG00000007565	RPUSD1	100	96.947	ENSMNEG00000042712	RPUSD1	100	96.947	Macaca_nemestrina
ENSPTRG00000007565	RPUSD1	100	96.947	ENSMLEG00000030591	RPUSD1	100	96.947	Mandrillus_leucophaeus
ENSPTRG00000007565	RPUSD1	98	56.863	ENSMAMG00000004735	rpusd1	98	56.863	Mastacembelus_armatus
ENSPTRG00000007565	RPUSD1	98	58.252	ENSMZEG00005003214	rpusd1	98	57.929	Maylandia_zebra
ENSPTRG00000007565	RPUSD1	97	62.706	ENSMGAG00000005447	RPUSD1	99	62.583	Meleagris_gallopavo
ENSPTRG00000007565	RPUSD1	92	81.667	ENSMAUG00000019998	Rpusd1	100	74.812	Mesocricetus_auratus
ENSPTRG00000007565	RPUSD1	100	90.076	ENSMICG00000017561	RPUSD1	100	90.076	Microcebus_murinus
ENSPTRG00000007565	RPUSD1	99	81.350	ENSMOCG00000014082	Rpusd1	99	81.029	Microtus_ochrogaster
ENSPTRG00000007565	RPUSD1	82	72.222	ENSMMOG00000012569	rpusd1	99	55.556	Mola_mola
ENSPTRG00000007565	RPUSD1	100	64.780	ENSMODG00000016882	RPUSD1	100	65.615	Monodelphis_domestica
ENSPTRG00000007565	RPUSD1	98	58.117	ENSMALG00000017818	rpusd1	98	57.792	Monopterus_albus
ENSPTRG00000007565	RPUSD1	100	81.090	MGP_CAROLIEiJ_G0021244	Rpusd1	100	80.769	Mus_caroli
ENSPTRG00000007565	RPUSD1	100	81.410	ENSMUSG00000041199	Rpusd1	100	81.090	Mus_musculus
ENSPTRG00000007565	RPUSD1	100	79.299	MGP_PahariEiJ_G0023562	Rpusd1	99	80.064	Mus_pahari
ENSPTRG00000007565	RPUSD1	100	81.410	MGP_SPRETEiJ_G0022155	Rpusd1	100	81.090	Mus_spretus
ENSPTRG00000007565	RPUSD1	100	79.167	ENSMPUG00000015897	RPUSD1	100	79.487	Mustela_putorius_furo
ENSPTRG00000007565	RPUSD1	100	85.256	ENSMLUG00000001089	RPUSD1	100	85.256	Myotis_lucifugus
ENSPTRG00000007565	RPUSD1	100	82.692	ENSNGAG00000003595	Rpusd1	100	82.051	Nannospalax_galili
ENSPTRG00000007565	RPUSD1	78	75.490	ENSNBRG00000006457	rpusd1	98	57.143	Neolamprologus_brichardi
ENSPTRG00000007565	RPUSD1	79	96.000	ENSNLEG00000008424	-	100	96.000	Nomascus_leucogenys
ENSPTRG00000007565	RPUSD1	100	67.949	ENSMEUG00000016049	RPUSD1	100	66.987	Notamacropus_eugenii
ENSPTRG00000007565	RPUSD1	99	75.484	ENSOPRG00000008340	RPUSD1	99	74.516	Ochotona_princeps
ENSPTRG00000007565	RPUSD1	100	80.769	ENSODEG00000016945	RPUSD1	100	80.449	Octodon_degus
ENSPTRG00000007565	RPUSD1	98	57.605	ENSONIG00000015672	rpusd1	99	57.282	Oreochromis_niloticus
ENSPTRG00000007565	RPUSD1	79	73.786	ENSOANG00000030625	-	79	72.642	Ornithorhynchus_anatinus
ENSPTRG00000007565	RPUSD1	88	70.435	ENSORLG00000013009	rpusd1	99	58.442	Oryzias_latipes
ENSPTRG00000007565	RPUSD1	88	69.565	ENSORLG00020010382	rpusd1	99	58.117	Oryzias_latipes_hni
ENSPTRG00000007565	RPUSD1	99	57.792	ENSORLG00015021354	rpusd1	99	57.792	Oryzias_latipes_hsok
ENSPTRG00000007565	RPUSD1	93	67.480	ENSOMEG00000021426	rpusd1	98	57.049	Oryzias_melastigma
ENSPTRG00000007565	RPUSD1	100	89.423	ENSOGAG00000003795	RPUSD1	100	89.423	Otolemur_garnettii
ENSPTRG00000007565	RPUSD1	100	84.936	ENSOARG00000014254	RPUSD1	100	84.936	Ovis_aries
ENSPTRG00000007565	RPUSD1	100	100.000	ENSPPAG00000034797	RPUSD1	100	100.000	Pan_paniscus
ENSPTRG00000007565	RPUSD1	100	82.051	ENSPPRG00000012389	RPUSD1	99	81.679	Panthera_pardus
ENSPTRG00000007565	RPUSD1	100	81.731	ENSPTIG00000008545	RPUSD1	99	81.679	Panthera_tigris_altaica
ENSPTRG00000007565	RPUSD1	100	96.183	ENSPANG00000024401	RPUSD1	100	96.183	Papio_anubis
ENSPTRG00000007565	RPUSD1	99	60.064	ENSPKIG00000018890	rpusd1	91	58.544	Paramormyrops_kingsleyae
ENSPTRG00000007565	RPUSD1	92	75.000	ENSPSIG00000013945	RPUSD1	100	64.725	Pelodiscus_sinensis
ENSPTRG00000007565	RPUSD1	98	57.049	ENSPMGG00000014950	rpusd1	98	57.049	Periophthalmus_magnuspinnatus
ENSPTRG00000007565	RPUSD1	100	81.731	ENSPEMG00000000497	Rpusd1	100	81.410	Peromyscus_maniculatus_bairdii
ENSPTRG00000007565	RPUSD1	79	61.538	ENSPMAG00000001563	rpusd1	81	56.574	Petromyzon_marinus
ENSPTRG00000007565	RPUSD1	100	66.667	ENSPCIG00000021216	-	94	66.026	Phascolarctos_cinereus
ENSPTRG00000007565	RPUSD1	98	57.705	ENSPFOG00000007946	rpusd1	98	57.705	Poecilia_formosa
ENSPTRG00000007565	RPUSD1	98	57.705	ENSPLAG00000011925	rpusd1	98	57.705	Poecilia_latipinna
ENSPTRG00000007565	RPUSD1	98	57.049	ENSPMEG00000002910	rpusd1	98	57.049	Poecilia_mexicana
ENSPTRG00000007565	RPUSD1	98	57.190	ENSPREG00000019851	rpusd1	98	56.863	Poecilia_reticulata
ENSPTRG00000007565	RPUSD1	100	67.628	ENSPCAG00000002258	RPUSD1	100	67.628	Procavia_capensis
ENSPTRG00000007565	RPUSD1	100	90.076	ENSPCOG00000022582	RPUSD1	100	90.076	Propithecus_coquereli
ENSPTRG00000007565	RPUSD1	100	83.654	ENSPVAG00000013104	RPUSD1	100	83.654	Pteropus_vampyrus
ENSPTRG00000007565	RPUSD1	98	57.929	ENSPNYG00000024076	rpusd1	98	57.605	Pundamilia_nyererei
ENSPTRG00000007565	RPUSD1	98	55.229	ENSPNAG00000013806	rpusd1	87	61.628	Pygocentrus_nattereri
ENSPTRG00000007565	RPUSD1	100	81.731	ENSRNOG00000023639	Rpusd1	100	81.410	Rattus_norvegicus
ENSPTRG00000007565	RPUSD1	100	96.947	ENSRBIG00000030238	RPUSD1	100	96.947	Rhinopithecus_bieti
ENSPTRG00000007565	RPUSD1	100	96.947	ENSRROG00000036663	RPUSD1	100	96.947	Rhinopithecus_roxellana
ENSPTRG00000007565	RPUSD1	100	89.103	ENSSBOG00000033063	RPUSD1	100	89.744	Saimiri_boliviensis_boliviensis
ENSPTRG00000007565	RPUSD1	100	66.346	ENSSHAG00000013500	RPUSD1	100	66.346	Sarcophilus_harrisii
ENSPTRG00000007565	RPUSD1	99	61.290	ENSSFOG00015014394	rpusd1	99	60.645	Scleropages_formosus
ENSPTRG00000007565	RPUSD1	98	56.066	ENSSMAG00000008045	rpusd1	91	56.066	Scophthalmus_maximus
ENSPTRG00000007565	RPUSD1	82	72.072	ENSSDUG00000001829	rpusd1	95	58.689	Seriola_dumerili
ENSPTRG00000007565	RPUSD1	82	72.072	ENSSLDG00000020853	rpusd1	95	58.689	Seriola_lalandi_dorsalis
ENSPTRG00000007565	RPUSD1	54	88.623	ENSSARG00000011187	-	100	88.623	Sorex_araneus
ENSPTRG00000007565	RPUSD1	85	49.479	ENSSPUG00000005119	-	100	52.525	Sphenodon_punctatus
ENSPTRG00000007565	RPUSD1	98	56.721	ENSSPAG00000012708	rpusd1	98	56.721	Stegastes_partitus
ENSPTRG00000007565	RPUSD1	100	86.538	ENSSSCG00000008000	RPUSD1	98	89.764	Sus_scrofa
ENSPTRG00000007565	RPUSD1	84	80.000	ENSTGUG00000015375	RPUSD1	100	71.094	Taeniopygia_guttata
ENSPTRG00000007565	RPUSD1	98	55.663	ENSTRUG00000003041	rpusd1	98	55.844	Takifugu_rubripes
ENSPTRG00000007565	RPUSD1	78	75.490	ENSTNIG00000002660	rpusd1	99	52.941	Tetraodon_nigroviridis
ENSPTRG00000007565	RPUSD1	99	86.817	ENSTTRG00000010167	RPUSD1	99	86.817	Tursiops_truncatus
ENSPTRG00000007565	RPUSD1	100	79.808	ENSUAMG00000012736	RPUSD1	100	79.808	Ursus_americanus
ENSPTRG00000007565	RPUSD1	100	80.449	ENSUMAG00000021174	RPUSD1	100	79.808	Ursus_maritimus
ENSPTRG00000007565	RPUSD1	99	79.743	ENSVVUG00000012357	RPUSD1	99	79.743	Vulpes_vulpes
ENSPTRG00000007565	RPUSD1	83	77.982	ENSXETG00000007184	rpusd1	100	59.936	Xenopus_tropicalis
ENSPTRG00000007565	RPUSD1	98	56.209	ENSXCOG00000017930	rpusd1	98	55.082	Xiphophorus_couchianus
ENSPTRG00000007565	RPUSD1	98	56.863	ENSXMAG00000024084	rpusd1	98	56.066	Xiphophorus_maculatus