EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTRG00000007712 (Gene tree)
Gene ID
467892
Gene Symbol
SRL
Alias
-
Full Name
sarcalumenin
Gene Type
protein_coding
Species
Pan_troglodytes
Status
putative
Strand
Minus strand
Length
59164 bases
Position
chr16:4457937-4517100
Accession
57296
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTRP00000058273MMR_HSR1PF01926.231.4e-0811
ENSPTRP00000073836MMR_HSR1PF01926.231.6e-0811
ENSPTRP00000089269MMR_HSR1PF01926.236.1e-0811
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTRT00000108810-495-ENSPTRP00000082741164 (aa)-A0A2I3T0H0
ENSPTRT00000089367-2796XM_016929308ENSPTRP00000089269931 (aa)XP_016784798A0A2I3TJ62
ENSPTRT00000066694-7088XM_016929312ENSPTRP00000058273431 (aa)XP_016784801H2RD38
ENSPTRT00000081790-1422XM_016929307ENSPTRP00000073836473 (aa)XP_016784796A0A2I3SBG9
Gene Model
Click here to download ENSPTRG00000007712's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000007712's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTRG00000007712SRL6935.452ENSPTRG00000006964EHD45635.526
ENSPTRG00000007712SRL9032.391ENSPTRG00000011214EHD27031.771
ENSPTRG00000007712SRL8433.699ENSPTRG00000003851EHD17233.699
ENSPTRG00000007712SRL8133.429ENSPTRG00000011805EHD36932.208
ENSPTRG00000007712SRL9032.391ENSPTRG00000046930EHD27031.771
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTRG00000007712SRL10099.789ENSG00000185739SRL10099.789Homo_sapiens
ENSPTRG00000007712SRL9983.488ENSAPOG00000018093srl10082.658Acanthochromis_polyacanthus
ENSPTRG00000007712SRL9976.047ENSAPOG00000012432SRL9874.664Acanthochromis_polyacanthus
ENSPTRG00000007712SRL10098.144ENSAMEG00000010862SRL9970.206Ailuropoda_melanoleuca
ENSPTRG00000007712SRL9975.581ENSACIG00000015419SRL9975.395Amphilophus_citrinellus
ENSPTRG00000007712SRL9983.256ENSACIG00000015799srl10081.898Amphilophus_citrinellus
ENSPTRG00000007712SRL9975.638ENSAOCG00000017049SRL9973.904Amphiprion_ocellaris
ENSPTRG00000007712SRL9983.721ENSAOCG00000007574srl10083.410Amphiprion_ocellaris
ENSPTRG00000007712SRL9983.721ENSAPEG00000006911srl10080.338Amphiprion_percula
ENSPTRG00000007712SRL9971.628ENSAPEG00000006533SRL9970.110Amphiprion_percula
ENSPTRG00000007712SRL9983.488ENSATEG00000024315srl9781.538Anabas_testudineus
ENSPTRG00000007712SRL9874.142ENSATEG00000009643SRL5273.407Anabas_testudineus
ENSPTRG00000007712SRL9990.045ENSACAG00000016380SRL8688.248Anolis_carolinensis
ENSPTRG00000007712SRL9983.256ENSACLG00000027685srl9783.032Astatotilapia_calliptera
ENSPTRG00000007712SRL9973.121ENSACLG00000024674SRL5772.648Astatotilapia_calliptera
ENSPTRG00000007712SRL9478.164ENSAMXG00000038693SRL10073.510Astyanax_mexicanus
ENSPTRG00000007712SRL9885.106ENSAMXG00000018789srl8783.559Astyanax_mexicanus
ENSPTRG00000007712SRL9996.744ENSBTAG00000001078SRL9972.443Bos_taurus
ENSPTRG00000007712SRL10099.072ENSCJAG00000019750SRL10098.732Callithrix_jacchus
ENSPTRG00000007712SRL10098.144ENSCAFG00000019233SRL10086.296Canis_familiaris
ENSPTRG00000007712SRL10098.144ENSCAFG00020025024SRL9969.256Canis_lupus_dingo
ENSPTRG00000007712SRL9996.744ENSCHIG00000017927SRL9867.609Capra_hircus
ENSPTRG00000007712SRL10098.608ENSTSYG00000007919SRL10098.608Carlito_syrichta
ENSPTRG00000007712SRL10097.912ENSCPOG00000012643SRL10096.406Cavia_porcellus
ENSPTRG00000007712SRL10092.812ENSCCAG00000032646SRL10099.208Cebus_capucinus
ENSPTRG00000007712SRL10099.768ENSCATG00000032227-10099.577Cercocebus_atys
ENSPTRG00000007712SRL10097.680ENSCLAG00000016242SRL10096.195Chinchilla_lanigera
ENSPTRG00000007712SRL10099.768ENSCSAG00000009635-9987.500Chlorocebus_sabaeus
ENSPTRG00000007712SRL8997.662ENSCHOG00000001618SRL8897.662Choloepus_hoffmanni
ENSPTRG00000007712SRL9993.523ENSCPBG00000026371SRL9689.293Chrysemys_picta_bellii
ENSPTRG00000007712SRL9162.595ENSCING00000005231-9359.620Ciona_intestinalis
ENSPTRG00000007712SRL10099.768ENSCANG00000035872SRL10099.768Colobus_angolensis_palliatus
ENSPTRG00000007712SRL10097.448ENSCGRG00001016630Srl10095.983Cricetulus_griseus_chok1gshd
ENSPTRG00000007712SRL10097.448ENSCGRG00000005458Srl10095.983Cricetulus_griseus_crigri
ENSPTRG00000007712SRL9873.176ENSCSEG00000011866SRL8972.686Cynoglossus_semilaevis
ENSPTRG00000007712SRL9983.256ENSCSEG00000016151srl9682.000Cynoglossus_semilaevis
ENSPTRG00000007712SRL9984.186ENSCVAG00000003513srl9683.937Cyprinodon_variegatus
ENSPTRG00000007712SRL9875.576ENSCVAG00000022465SRL6074.779Cyprinodon_variegatus
ENSPTRG00000007712SRL9984.884ENSDARG00000104587srl9881.917Danio_rerio
ENSPTRG00000007712SRL8876.562ENSDARG00000112959CABZ01072309.110076.562Danio_rerio
ENSPTRG00000007712SRL10098.608ENSDNOG00000011643SRL9970.064Dasypus_novemcinctus
ENSPTRG00000007712SRL10096.984ENSDORG00000014807Srl10095.349Dipodomys_ordii
ENSPTRG00000007712SRL8565.508ENSEBUG00000015937srl8867.816Eptatretus_burgeri
ENSPTRG00000007712SRL9997.209ENSEASG00005000942SRL9969.561Equus_asinus_asinus
ENSPTRG00000007712SRL9997.209ENSECAG00000024219SRL9995.763Equus_caballus
ENSPTRG00000007712SRL9784.524ENSELUG00000015616srl9779.574Esox_lucius
ENSPTRG00000007712SRL10097.448ENSFCAG00000022075SRL10095.349Felis_catus
ENSPTRG00000007712SRL9992.075ENSFALG00000004328SRL9967.742Ficedula_albicollis
ENSPTRG00000007712SRL10098.376ENSFDAG00000006199SRL10096.195Fukomys_damarensis
ENSPTRG00000007712SRL9975.349ENSFHEG00000011854SRL9876.417Fundulus_heteroclitus
ENSPTRG00000007712SRL9982.791ENSFHEG00000011239srl9880.303Fundulus_heteroclitus
ENSPTRG00000007712SRL9982.086ENSGMOG00000014954srl9981.678Gadus_morhua
ENSPTRG00000007712SRL9992.075ENSGALG00000038884SRL9690.487Gallus_gallus
ENSPTRG00000007712SRL9976.279ENSGAFG00000016984SRL9876.244Gambusia_affinis
ENSPTRG00000007712SRL9983.256ENSGAFG00000000010srl9782.472Gambusia_affinis
ENSPTRG00000007712SRL9980.952ENSGACG00000011332srl9980.795Gasterosteus_aculeatus
ENSPTRG00000007712SRL9993.007ENSGAGG00000015590SRL7466.088Gopherus_agassizii
ENSPTRG00000007712SRL10099.768ENSGGOG00000011312-10099.577Gorilla_gorilla
ENSPTRG00000007712SRL9972.893ENSHBUG00000015710SRL5772.527Haplochromis_burtoni
ENSPTRG00000007712SRL9983.256ENSHBUG00000007581srl9783.032Haplochromis_burtoni
ENSPTRG00000007712SRL10098.608ENSHGLG00000015271SRL10097.040Heterocephalus_glaber_female
ENSPTRG00000007712SRL10098.608ENSHGLG00100019378SRL10097.040Heterocephalus_glaber_male
ENSPTRG00000007712SRL9983.607ENSHCOG00000008687srl9882.805Hippocampus_comes
ENSPTRG00000007712SRL9972.769ENSHCOG00000001012SRL5171.242Hippocampus_comes
ENSPTRG00000007712SRL9982.558ENSIPUG00000012513srl10079.070Ictalurus_punctatus
ENSPTRG00000007712SRL9770.883ENSIPUG00000011609SRL9569.037Ictalurus_punctatus
ENSPTRG00000007712SRL10097.912ENSSTOG00000021151-10095.983Ictidomys_tridecemlineatus
ENSPTRG00000007712SRL10097.448ENSJJAG00000016400Srl10095.349Jaculus_jaculus
ENSPTRG00000007712SRL9976.512ENSKMAG00000019537SRL10076.417Kryptolebias_marmoratus
ENSPTRG00000007712SRL9884.561ENSKMAG00000014115srl9384.561Kryptolebias_marmoratus
ENSPTRG00000007712SRL9975.638ENSLBEG00000013811SRL9973.478Labrus_bergylta
ENSPTRG00000007712SRL9983.023ENSLBEG00000026643srl9781.099Labrus_bergylta
ENSPTRG00000007712SRL9986.977ENSLACG00000002825SRL10085.430Latimeria_chalumnae
ENSPTRG00000007712SRL9986.047ENSLOCG00000002644srl9784.581Lepisosteus_oculatus
ENSPTRG00000007712SRL10097.912ENSLAFG00000006329SRL9968.717Loxodonta_africana
ENSPTRG00000007712SRL10099.768ENSMFAG00000037383SRL10099.768Macaca_fascicularis
ENSPTRG00000007712SRL10099.768ENSMNEG00000019236-10096.033Macaca_nemestrina
ENSPTRG00000007712SRL10091.543ENSMLEG00000032156SRL10091.543Mandrillus_leucophaeus
ENSPTRG00000007712SRL9874.600ENSMAMG00000013756SRL5373.904Mastacembelus_armatus
ENSPTRG00000007712SRL9983.721ENSMAMG00000023322srl9483.484Mastacembelus_armatus
ENSPTRG00000007712SRL9983.256ENSMZEG00005004548srl9783.032Maylandia_zebra
ENSPTRG00000007712SRL9973.121ENSMZEG00005004010SRL5772.648Maylandia_zebra
ENSPTRG00000007712SRL9992.075ENSMGAG00000009342SRL9691.361Meleagris_gallopavo
ENSPTRG00000007712SRL10097.448ENSMICG00000032307SRL10095.772Microcebus_murinus
ENSPTRG00000007712SRL10096.984ENSMOCG00000008208Srl10095.349Microtus_ochrogaster
ENSPTRG00000007712SRL9973.744ENSMMOG00000021572SRL9972.747Mola_mola
ENSPTRG00000007712SRL9982.791ENSMMOG00000013970srl9882.579Mola_mola
ENSPTRG00000007712SRL9996.744ENSMODG00000016380-9962.644Monodelphis_domestica
ENSPTRG00000007712SRL9776.134ENSMALG00000000670SRL9875.359Monopterus_albus
ENSPTRG00000007712SRL9983.023ENSMALG00000005039srl9982.222Monopterus_albus
ENSPTRG00000007712SRL10097.216MGP_CAROLIEiJ_G0020400Srl10095.560Mus_caroli
ENSPTRG00000007712SRL10097.216ENSMUSG00000022519Srl10095.560Mus_musculus
ENSPTRG00000007712SRL10096.984MGP_PahariEiJ_G0016108Srl9967.104Mus_pahari
ENSPTRG00000007712SRL10097.216MGP_SPRETEiJ_G0021294Srl10095.560Mus_spretus
ENSPTRG00000007712SRL10097.912ENSMPUG00000015025SRL9770.250Mustela_putorius_furo
ENSPTRG00000007712SRL10096.984ENSMLUG00000030733SRL9969.641Myotis_lucifugus
ENSPTRG00000007712SRL10096.984ENSNGAG00000019741Srl10095.560Nannospalax_galili
ENSPTRG00000007712SRL9972.789ENSNBRG00000002422SRL6765.655Neolamprologus_brichardi
ENSPTRG00000007712SRL9983.256ENSNBRG00000023775srl9781.579Neolamprologus_brichardi
ENSPTRG00000007712SRL10092.812ENSNLEG00000029051SRL10092.812Nomascus_leucogenys
ENSPTRG00000007712SRL10090.255ENSOPRG00000000477-9966.881Ochotona_princeps
ENSPTRG00000007712SRL10097.448ENSODEG00000013256SRL10096.195Octodon_degus
ENSPTRG00000007712SRL9983.488ENSONIG00000005192srl9979.487Oreochromis_niloticus
ENSPTRG00000007712SRL10098.144ENSOCUG00000025140SRL9971.067Oryctolagus_cuniculus
ENSPTRG00000007712SRL9983.023ENSORLG00000008291srl9284.794Oryzias_latipes
ENSPTRG00000007712SRL9975.352ENSORLG00000015064SRL9973.407Oryzias_latipes
ENSPTRG00000007712SRL9982.791ENSORLG00020019784srl7984.755Oryzias_latipes_hni
ENSPTRG00000007712SRL9975.587ENSORLG00020018173SRL9973.626Oryzias_latipes_hni
ENSPTRG00000007712SRL9982.326ENSORLG00015009342srl9380.488Oryzias_latipes_hsok
ENSPTRG00000007712SRL9976.000ENSORLG00015019063SRL9974.009Oryzias_latipes_hsok
ENSPTRG00000007712SRL9973.576ENSOMEG00000005682SRL6761.065Oryzias_melastigma
ENSPTRG00000007712SRL9982.558ENSOMEG00000010006srl9882.045Oryzias_melastigma
ENSPTRG00000007712SRL10096.520ENSOGAG00000029266SRL9970.943Otolemur_garnettii
ENSPTRG00000007712SRL9996.744ENSOARG00000003074SRL7295.186Ovis_aries
ENSPTRG00000007712SRL100100.000ENSPPAG00000024919-100100.000Pan_paniscus
ENSPTRG00000007712SRL10097.680ENSPPRG00000010274SRL10097.680Panthera_pardus
ENSPTRG00000007712SRL10097.680ENSPTIG00000015162SRL10097.680Panthera_tigris_altaica
ENSPTRG00000007712SRL10099.768ENSPANG00000013804SRL10097.452Papio_anubis
ENSPTRG00000007712SRL9977.518ENSPKIG00000024974SRL9175.109Paramormyrops_kingsleyae
ENSPTRG00000007712SRL9984.884ENSPKIG00000006405srl9882.251Paramormyrops_kingsleyae
ENSPTRG00000007712SRL9992.308ENSPSIG00000008586SRL9959.468Pelodiscus_sinensis
ENSPTRG00000007712SRL9972.558ENSPMGG00000023505-9972.072Periophthalmus_magnuspinnatus
ENSPTRG00000007712SRL9984.419ENSPMGG00000021081srl9783.407Periophthalmus_magnuspinnatus
ENSPTRG00000007712SRL10097.216ENSPEMG00000015842Srl10095.560Peromyscus_maniculatus_bairdii
ENSPTRG00000007712SRL9767.431ENSPMAG00000004786srl9967.202Petromyzon_marinus
ENSPTRG00000007712SRL9996.744ENSPCIG00000012128SRL9995.575Phascolarctos_cinereus
ENSPTRG00000007712SRL9981.179ENSPFOG00000011408srl9678.846Poecilia_formosa
ENSPTRG00000007712SRL9983.023ENSPLAG00000008017srl9782.247Poecilia_latipinna
ENSPTRG00000007712SRL9976.047ENSPLAG00000002932SRL9874.830Poecilia_latipinna
ENSPTRG00000007712SRL9973.923ENSPMEG00000005890SRL5973.846Poecilia_mexicana
ENSPTRG00000007712SRL9983.023ENSPMEG00000006745srl9782.247Poecilia_mexicana
ENSPTRG00000007712SRL9976.977ENSPREG00000000315SRL9875.964Poecilia_reticulata
ENSPTRG00000007712SRL9983.023ENSPREG00000007751srl10081.596Poecilia_reticulata
ENSPTRG00000007712SRL9799.761ENSPPYG00000007053SRL9899.761Pongo_abelii
ENSPTRG00000007712SRL9996.512ENSPCAG00000003378-8891.165Procavia_capensis
ENSPTRG00000007712SRL10097.912ENSPCOG00000023135SRL10097.912Propithecus_coquereli
ENSPTRG00000007712SRL10097.912ENSPVAG00000006586SRL9969.775Pteropus_vampyrus
ENSPTRG00000007712SRL9983.256ENSPNYG00000001200srl9783.032Pundamilia_nyererei
ENSPTRG00000007712SRL9972.686ENSPNYG00000003423SRL5772.648Pundamilia_nyererei
ENSPTRG00000007712SRL9976.347ENSPNAG00000007361-9275.056Pygocentrus_nattereri
ENSPTRG00000007712SRL9982.558ENSPNAG00000023106srl9582.022Pygocentrus_nattereri
ENSPTRG00000007712SRL10096.984ENSRNOG00000005269Srl9969.223Rattus_norvegicus
ENSPTRG00000007712SRL10099.768ENSRBIG00000042358SRL9990.635Rhinopithecus_bieti
ENSPTRG00000007712SRL10099.072ENSSBOG00000029273SRL10098.732Saimiri_boliviensis_boliviensis
ENSPTRG00000007712SRL9996.744ENSSHAG00000011715-9961.175Sarcophilus_harrisii
ENSPTRG00000007712SRL9984.419ENSSFOG00015009773srl9982.213Scleropages_formosus
ENSPTRG00000007712SRL9977.465ENSSFOG00015021327SRL5175.877Scleropages_formosus
ENSPTRG00000007712SRL9982.791ENSSMAG00000016274srl10079.704Scophthalmus_maximus
ENSPTRG00000007712SRL9973.756ENSSMAG00000002232SRL5072.527Scophthalmus_maximus
ENSPTRG00000007712SRL9974.600ENSSDUG00000009161SRL9875.000Seriola_dumerili
ENSPTRG00000007712SRL9983.953ENSSDUG00000010808srl9783.484Seriola_dumerili
ENSPTRG00000007712SRL9983.953ENSSLDG00000022024srl9583.484Seriola_lalandi_dorsalis
ENSPTRG00000007712SRL9974.157ENSSLDG00000014601SRL9974.561Seriola_lalandi_dorsalis
ENSPTRG00000007712SRL9991.395ENSSPUG00000016859SRL9989.845Sphenodon_punctatus
ENSPTRG00000007712SRL9983.953ENSSPAG00000019105srl9682.418Stegastes_partitus
ENSPTRG00000007712SRL9975.814ENSSPAG00000014254SRL9874.773Stegastes_partitus
ENSPTRG00000007712SRL9997.209ENSSSCG00000007949SRL9996.875Sus_scrofa
ENSPTRG00000007712SRL9991.841ENSTGUG00000003951-9990.265Taeniopygia_guttata
ENSPTRG00000007712SRL8491.989ENSTGUG00000016121-9692.816Taeniopygia_guttata
ENSPTRG00000007712SRL9775.179ENSTRUG00000013310SRL9153.045Takifugu_rubripes
ENSPTRG00000007712SRL9983.256ENSTRUG00000006005srl9681.596Takifugu_rubripes
ENSPTRG00000007712SRL9983.256ENSTNIG00000009739srl9681.375Tetraodon_nigroviridis
ENSPTRG00000007712SRL9797.375ENSTTRG00000002709-6896.591Tursiops_truncatus
ENSPTRG00000007712SRL10097.912ENSUAMG00000005701SRL10068.298Ursus_americanus
ENSPTRG00000007712SRL10098.144ENSUMAG00000002574SRL10068.114Ursus_maritimus
ENSPTRG00000007712SRL10098.144ENSVVUG00000016331-8769.490Vulpes_vulpes
ENSPTRG00000007712SRL9990.698ENSXETG00000017313srl10088.717Xenopus_tropicalis
ENSPTRG00000007712SRL9884.561ENSXCOG00000010424srl9784.561Xiphophorus_couchianus
ENSPTRG00000007712SRL9975.814ENSXCOG00000014584SRL10074.945Xiphophorus_couchianus
ENSPTRG00000007712SRL9983.488ENSXMAG00000004625srl9380.786Xiphophorus_maculatus
ENSPTRG00000007712SRL9974.260ENSXMAG00000027598SRL6274.505Xiphophorus_maculatus

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