EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000007744 (Gene tree)
Gene ID: -
Gene Symbol: RBFOX1
Alias: -
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 2513825 bases
Position: chr16:5575044-8088868
Accession: 13786
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000074112	Fox-1_C	PF12414.8	1.3e-42	1	1
ENSPTRP00000087958	Fox-1_C	PF12414.8	2.1e-42	1	1
ENSPTRP00000079720	Fox-1_C	PF12414.8	2.2e-40	1	1
ENSPTRP00000090982	Fox-1_C	PF12414.8	3.1e-40	1	1
ENSPTRP00000085204	Fox-1_C	PF12414.8	3.3e-40	1	1
ENSPTRP00000042877	Fox-1_C	PF12414.8	4.4e-40	1	1
ENSPTRP00000085111	Fox-1_C	PF12414.8	6.2e-40	1	1
ENSPTRP00000088403	Fox-1_C	PF12414.8	6.4e-23	1	1
ENSPTRP00000074112	RRM_1	PF00076.22	5e-18	1	1
ENSPTRP00000088403	RRM_1	PF00076.22	5.1e-18	1	1
ENSPTRP00000079720	RRM_1	PF00076.22	5.3e-18	1	1
ENSPTRP00000087958	RRM_1	PF00076.22	5.9e-18	1	1
ENSPTRP00000042877	RRM_1	PF00076.22	6.8e-18	1	1
ENSPTRP00000085111	RRM_1	PF00076.22	9.5e-18	1	1
ENSPTRP00000085204	RRM_1	PF00076.22	9.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000081332	-	1278	-	ENSPTRP00000087958	425 (aa)	-	A0A2I3TFB9
ENSPTRT00000092745	-	1257	-	ENSPTRP00000079720	418 (aa)	-	A0A2I3ST32
ENSPTRT00000044226	-	1401	-	ENSPTRP00000042877	466 (aa)	-	H2R1U0
ENSPTRT00000103269	-	1128	-	ENSPTRP00000074112	375 (aa)	-	A0A2I3SC88
ENSPTRT00000092732	-	1749	XM_016928665	ENSPTRP00000085111	582 (aa)	XP_016784154	A0A2I3T7A9
ENSPTRT00000096894	-	1140	-	ENSPTRP00000088403	379 (aa)	-	A0A2I3TGQ4
ENSPTRT00000078279	-	1176	-	ENSPTRP00000085204	391 (aa)	-	A0A2I3T7I1
ENSPTRT00000095171	-	1143	-	ENSPTRP00000090982	380 (aa)	-	A0A2I3TPX1

Gene Model

Click here to download ENSPTRG00000007744's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000007744's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000007744	RBFOX1	79	78.333	ENSPTRG00000009727	RBFOX3	100	77.143
ENSPTRG00000007744	RBFOX1	97	62.990	ENSPTRG00000014305	RBFOX2	96	65.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000007744	RBFOX1	100	100.000	ENSG00000078328	RBFOX1	100	100.000	Homo_sapiens
ENSPTRG00000007744	RBFOX1	97	81.316	ENSAPOG00000003197	rbfox1	98	81.365	Acanthochromis_polyacanthus
ENSPTRG00000007744	RBFOX1	61	97.391	ENSAMEG00000008605	RBFOX1	100	96.000	Ailuropoda_melanoleuca
ENSPTRG00000007744	RBFOX1	64	71.375	ENSACIG00000005478	rbfox1	68	71.375	Amphilophus_citrinellus
ENSPTRG00000007744	RBFOX1	70	78.214	ENSAOCG00000008283	rbfox1	96	77.857	Amphiprion_ocellaris
ENSPTRG00000007744	RBFOX1	95	74.515	ENSAPEG00000010636	rbfox1	100	74.656	Amphiprion_percula
ENSPTRG00000007744	RBFOX1	70	76.408	ENSATEG00000007513	rbfox1	97	75.704	Anabas_testudineus
ENSPTRG00000007744	RBFOX1	99	89.258	ENSAPLG00000013263	RBFOX1	98	92.602	Anas_platyrhynchos
ENSPTRG00000007744	RBFOX1	97	84.949	ENSACAG00000004013	RBFOX1	98	86.005	Anolis_carolinensis
ENSPTRG00000007744	RBFOX1	100	99.744	ENSANAG00000029527	RBFOX1	100	99.744	Aotus_nancymaae
ENSPTRG00000007744	RBFOX1	58	89.498	ENSAMXG00000002431	rbfox1	64	89.498	Astyanax_mexicanus
ENSPTRG00000007744	RBFOX1	99	92.875	ENSBTAG00000007210	RBFOX1	98	98.462	Bos_taurus
ENSPTRG00000007744	RBFOX1	100	99.488	ENSCJAG00000017351	RBFOX1	100	99.488	Callithrix_jacchus
ENSPTRG00000007744	RBFOX1	100	98.804	ENSCAFG00000019082	RBFOX1	100	98.804	Canis_familiaris
ENSPTRG00000007744	RBFOX1	71	98.986	ENSCAFG00020024881	RBFOX1	83	98.986	Canis_lupus_dingo
ENSPTRG00000007744	RBFOX1	99	92.875	ENSCHIG00000023549	RBFOX1	98	98.462	Capra_hircus
ENSPTRG00000007744	RBFOX1	99	97.878	ENSTSYG00000005334	RBFOX1	100	99.229	Carlito_syrichta
ENSPTRG00000007744	RBFOX1	100	97.368	ENSCAPG00000017669	RBFOX1	100	97.368	Cavia_aperea
ENSPTRG00000007744	RBFOX1	100	97.368	ENSCPOG00000011314	RBFOX1	100	97.368	Cavia_porcellus
ENSPTRG00000007744	RBFOX1	100	99.522	ENSCCAG00000023031	RBFOX1	100	99.766	Cebus_capucinus
ENSPTRG00000007744	RBFOX1	100	100.000	ENSCATG00000033816	RBFOX1	100	100.000	Cercocebus_atys
ENSPTRG00000007744	RBFOX1	100	97.847	ENSCLAG00000012761	RBFOX1	100	97.847	Chinchilla_lanigera
ENSPTRG00000007744	RBFOX1	90	93.784	ENSCSAG00000008739	RBFOX1	98	98.919	Chlorocebus_sabaeus
ENSPTRG00000007744	RBFOX1	81	96.923	ENSCHOG00000012843	RBFOX1	100	76.316	Choloepus_hoffmanni
ENSPTRG00000007744	RBFOX1	97	95.330	ENSCPBG00000026626	RBFOX1	98	94.615	Chrysemys_picta_bellii
ENSPTRG00000007744	RBFOX1	100	100.000	ENSCANG00000033125	RBFOX1	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000007744	RBFOX1	100	97.608	ENSCGRG00001013729	Rbfox1	100	97.608	Cricetulus_griseus_chok1gshd
ENSPTRG00000007744	RBFOX1	100	97.608	ENSCGRG00000003272	Rbfox1	100	97.608	Cricetulus_griseus_crigri
ENSPTRG00000007744	RBFOX1	93	76.216	ENSCSEG00000008840	rbfox1	100	76.216	Cynoglossus_semilaevis
ENSPTRG00000007744	RBFOX1	97	88.430	ENSDARG00000014746	rbfox1	100	87.317	Danio_rerio
ENSPTRG00000007744	RBFOX1	99	93.130	ENSDNOG00000043612	RBFOX1	96	94.045	Dasypus_novemcinctus
ENSPTRG00000007744	RBFOX1	100	89.604	ENSDORG00000010024	Rbfox1	100	93.316	Dipodomys_ordii
ENSPTRG00000007744	RBFOX1	100	78.947	ENSETEG00000003771	RBFOX1	100	78.947	Echinops_telfairi
ENSPTRG00000007744	RBFOX1	97	98.765	ENSEASG00005011599	RBFOX1	98	99.231	Equus_asinus_asinus
ENSPTRG00000007744	RBFOX1	97	98.519	ENSECAG00000012667	RBFOX1	98	98.519	Equus_caballus
ENSPTRG00000007744	RBFOX1	83	73.832	ENSELUG00000013096	rbfox1	100	52.520	Esox_lucius
ENSPTRG00000007744	RBFOX1	100	99.233	ENSFCAG00000025322	RBFOX1	100	99.233	Felis_catus
ENSPTRG00000007744	RBFOX1	78	92.793	ENSFALG00000004027	RBFOX1	100	92.793	Ficedula_albicollis
ENSPTRG00000007744	RBFOX1	100	97.847	ENSFDAG00000007388	RBFOX1	100	97.847	Fukomys_damarensis
ENSPTRG00000007744	RBFOX1	100	93.301	ENSGALG00000034325	RBFOX1	100	93.301	Gallus_gallus
ENSPTRG00000007744	RBFOX1	100	92.823	ENSGAGG00000023681	RBFOX1	100	92.857	Gopherus_agassizii
ENSPTRG00000007744	RBFOX1	100	100.000	ENSGGOG00000016871	-	100	100.000	Gorilla_gorilla
ENSPTRG00000007744	RBFOX1	100	97.608	ENSHGLG00000016944	RBFOX1	100	97.608	Heterocephalus_glaber_female
ENSPTRG00000007744	RBFOX1	100	97.608	ENSHGLG00100003272	RBFOX1	100	97.608	Heterocephalus_glaber_male
ENSPTRG00000007744	RBFOX1	83	76.562	ENSHCOG00000016419	rbfox1	91	76.562	Hippocampus_comes
ENSPTRG00000007744	RBFOX1	93	90.857	ENSIPUG00000015215	rbfox1	100	90.857	Ictalurus_punctatus
ENSPTRG00000007744	RBFOX1	100	96.890	ENSSTOG00000000322	RBFOX1	100	96.890	Ictidomys_tridecemlineatus
ENSPTRG00000007744	RBFOX1	100	94.498	ENSJJAG00000002575	Rbfox1	100	94.498	Jaculus_jaculus
ENSPTRG00000007744	RBFOX1	98	76.115	ENSLBEG00000014659	rbfox1	97	78.533	Labrus_bergylta
ENSPTRG00000007744	RBFOX1	97	86.041	ENSLOCG00000006675	rbfox1	99	86.041	Lepisosteus_oculatus
ENSPTRG00000007744	RBFOX1	74	99.351	ENSLAFG00000011480	RBFOX1	100	99.351	Loxodonta_africana
ENSPTRG00000007744	RBFOX1	100	99.785	ENSMFAG00000036447	RBFOX1	100	99.785	Macaca_fascicularis
ENSPTRG00000007744	RBFOX1	100	99.785	ENSMMUG00000003458	RBFOX1	100	99.785	Macaca_mulatta
ENSPTRG00000007744	RBFOX1	100	99.785	ENSMNEG00000032034	RBFOX1	100	99.785	Macaca_nemestrina
ENSPTRG00000007744	RBFOX1	100	100.000	ENSMLEG00000015382	RBFOX1	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000007744	RBFOX1	93	80.548	ENSMAMG00000003142	rbfox1	100	81.096	Mastacembelus_armatus
ENSPTRG00000007744	RBFOX1	75	88.380	ENSMGAG00000008606	RBFOX1	96	88.571	Meleagris_gallopavo
ENSPTRG00000007744	RBFOX1	99	58.311	ENSMAUG00000020570	Rbfox1	99	57.784	Mesocricetus_auratus
ENSPTRG00000007744	RBFOX1	100	99.233	ENSMICG00000034286	RBFOX1	100	99.233	Microcebus_murinus
ENSPTRG00000007744	RBFOX1	100	97.608	ENSMOCG00000020932	Rbfox1	100	97.608	Microtus_ochrogaster
ENSPTRG00000007744	RBFOX1	84	77.044	ENSMMOG00000009716	rbfox1	86	77.885	Mola_mola
ENSPTRG00000007744	RBFOX1	86	92.373	ENSMODG00000005826	RBFOX1	100	97.740	Monodelphis_domestica
ENSPTRG00000007744	RBFOX1	97	81.915	ENSMALG00000003337	rbfox1	98	81.600	Monopterus_albus
ENSPTRG00000007744	RBFOX1	100	97.847	MGP_CAROLIEiJ_G0020427	Rbfox1	100	97.847	Mus_caroli
ENSPTRG00000007744	RBFOX1	100	97.608	ENSMUSG00000008658	Rbfox1	100	99.248	Mus_musculus
ENSPTRG00000007744	RBFOX1	100	97.847	MGP_PahariEiJ_G0016135	Rbfox1	100	97.847	Mus_pahari
ENSPTRG00000007744	RBFOX1	100	97.368	MGP_SPRETEiJ_G0021321	Rbfox1	100	97.368	Mus_spretus
ENSPTRG00000007744	RBFOX1	89	93.460	ENSMPUG00000014822	RBFOX1	93	98.638	Mustela_putorius_furo
ENSPTRG00000007744	RBFOX1	77	94.137	ENSMLUG00000015896	RBFOX1	100	97.078	Myotis_lucifugus
ENSPTRG00000007744	RBFOX1	100	98.086	ENSNGAG00000023276	Rbfox1	100	98.086	Nannospalax_galili
ENSPTRG00000007744	RBFOX1	100	61.429	ENSNBRG00000011084	rbfox1	98	61.429	Neolamprologus_brichardi
ENSPTRG00000007744	RBFOX1	100	99.761	ENSNLEG00000010017	-	100	99.761	Nomascus_leucogenys
ENSPTRG00000007744	RBFOX1	100	80.622	ENSMEUG00000012525	RBFOX1	100	80.622	Notamacropus_eugenii
ENSPTRG00000007744	RBFOX1	88	97.391	ENSOPRG00000006199	-	100	80.383	Ochotona_princeps
ENSPTRG00000007744	RBFOX1	100	97.129	ENSODEG00000013166	RBFOX1	100	97.129	Octodon_degus
ENSPTRG00000007744	RBFOX1	89	91.257	ENSOANG00000002379	RBFOX1	98	95.676	Ornithorhynchus_anatinus
ENSPTRG00000007744	RBFOX1	58	96.330	ENSOCUG00000001205	-	100	94.222	Oryctolagus_cuniculus
ENSPTRG00000007744	RBFOX1	99	94.643	ENSOGAG00000025535	RBFOX1	98	97.187	Otolemur_garnettii
ENSPTRG00000007744	RBFOX1	59	93.074	ENSOARG00000005135	RBFOX1	99	93.074	Ovis_aries
ENSPTRG00000007744	RBFOX1	100	100.000	ENSPPAG00000036238	-	100	100.000	Pan_paniscus
ENSPTRG00000007744	RBFOX1	100	99.233	ENSPPRG00000006546	RBFOX1	100	99.233	Panthera_pardus
ENSPTRG00000007744	RBFOX1	98	87.634	ENSPTIG00000021154	RBFOX1	99	87.634	Panthera_tigris_altaica
ENSPTRG00000007744	RBFOX1	100	100.000	ENSPANG00000026500	RBFOX1	100	100.000	Papio_anubis
ENSPTRG00000007744	RBFOX1	97	89.041	ENSPKIG00000009667	-	95	90.616	Paramormyrops_kingsleyae
ENSPTRG00000007744	RBFOX1	71	92.857	ENSPKIG00000019353	rbfox1	86	92.453	Paramormyrops_kingsleyae
ENSPTRG00000007744	RBFOX1	99	89.031	ENSPSIG00000006523	RBFOX1	97	92.821	Pelodiscus_sinensis
ENSPTRG00000007744	RBFOX1	100	97.847	ENSPEMG00000017607	Rbfox1	100	97.847	Peromyscus_maniculatus_bairdii
ENSPTRG00000007744	RBFOX1	72	94.014	ENSPCIG00000026887	RBFOX1	100	94.014	Phascolarctos_cinereus
ENSPTRG00000007744	RBFOX1	89	94.278	ENSPPYG00000007079	-	93	99.455	Pongo_abelii
ENSPTRG00000007744	RBFOX1	90	89.418	ENSPCAG00000002630	RBFOX1	100	89.418	Procavia_capensis
ENSPTRG00000007744	RBFOX1	100	99.043	ENSPCOG00000025687	RBFOX1	100	99.043	Propithecus_coquereli
ENSPTRG00000007744	RBFOX1	100	94.019	ENSPVAG00000013467	RBFOX1	100	94.019	Pteropus_vampyrus
ENSPTRG00000007744	RBFOX1	93	87.838	ENSPNAG00000023109	rbfox1	100	87.838	Pygocentrus_nattereri
ENSPTRG00000007744	RBFOX1	100	95.215	ENSRNOG00000002827	Rbfox1	100	95.215	Rattus_norvegicus
ENSPTRG00000007744	RBFOX1	96	100.000	ENSRBIG00000044478	RBFOX1	100	100.000	Rhinopithecus_bieti
ENSPTRG00000007744	RBFOX1	100	100.000	ENSRROG00000044411	RBFOX1	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000007744	RBFOX1	100	99.488	ENSSBOG00000033726	RBFOX1	100	99.488	Saimiri_boliviensis_boliviensis
ENSPTRG00000007744	RBFOX1	100	88.161	ENSSHAG00000009257	RBFOX1	98	91.304	Sarcophilus_harrisii
ENSPTRG00000007744	RBFOX1	97	77.348	ENSSFOG00015023675	rbfox1	97	86.667	Scleropages_formosus
ENSPTRG00000007744	RBFOX1	89	73.761	ENSSFOG00015009955	-	87	73.761	Scleropages_formosus
ENSPTRG00000007744	RBFOX1	97	82.415	ENSSMAG00000015505	rbfox1	93	82.152	Scophthalmus_maximus
ENSPTRG00000007744	RBFOX1	97	79.620	ENSSDUG00000016413	rbfox1	99	79.726	Seriola_dumerili
ENSPTRG00000007744	RBFOX1	83	78.594	ENSSLDG00000009353	rbfox1	95	78.146	Seriola_lalandi_dorsalis
ENSPTRG00000007744	RBFOX1	83	89.776	ENSSPUG00000009732	RBFOX1	87	89.776	Sphenodon_punctatus
ENSPTRG00000007744	RBFOX1	100	78.042	ENSSPAG00000009723	rbfox1	100	81.003	Stegastes_partitus
ENSPTRG00000007744	RBFOX1	97	98.025	ENSSSCG00000007917	RBFOX1	100	98.870	Sus_scrofa
ENSPTRG00000007744	RBFOX1	98	89.948	ENSTGUG00000004562	RBFOX1	100	92.821	Taeniopygia_guttata
ENSPTRG00000007744	RBFOX1	97	80.739	ENSTRUG00000020940	rbfox1	99	81.003	Takifugu_rubripes
ENSPTRG00000007744	RBFOX1	64	62.718	ENSTNIG00000002567	rbfox1	100	64.460	Tetraodon_nigroviridis
ENSPTRG00000007744	RBFOX1	81	89.655	ENSTBEG00000009169	-	81	89.655	Tupaia_belangeri
ENSPTRG00000007744	RBFOX1	100	98.086	ENSTTRG00000005700	RBFOX1	100	98.086	Tursiops_truncatus
ENSPTRG00000007744	RBFOX1	100	96.570	ENSUAMG00000024633	RBFOX1	100	96.570	Ursus_americanus
ENSPTRG00000007744	RBFOX1	100	87.335	ENSUMAG00000003579	RBFOX1	100	87.599	Ursus_maritimus
ENSPTRG00000007744	RBFOX1	81	99.351	ENSVPAG00000001284	RBFOX1	81	99.351	Vicugna_pacos
ENSPTRG00000007744	RBFOX1	97	98.626	ENSVVUG00000017311	RBFOX1	98	98.378	Vulpes_vulpes