EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000007897 (Gene tree)
Gene ID: 744733
Gene Symbol: RBBP6
Alias: -
Full Name: RB binding protein 6%2C ubiquitin ligase
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 31832 bases
Position: chr16:24001927-24033758
Accession: 5907
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000068102	zf-CCHC_2	PF13696.6	6.5e-09	1	1
ENSPTRP00000088814	zf-CCHC_2	PF13696.6	6.6e-09	1	1
ENSPTRP00000013482	zf-CCHC_2	PF13696.6	6.7e-09	1	1
ENSPTRP00000066804	zf-CCHC_2	PF13696.6	7.7e-09	1	1
ENSPTRP00000066804	zf-CCHC	PF00098.23	6.3e-05	1	1
ENSPTRP00000068102	zf-CCHC	PF00098.23	0.00013	1	1
ENSPTRP00000013482	zf-CCHC	PF00098.23	0.00013	1	1
ENSPTRP00000088814	zf-CCHC	PF00098.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000104230	-	2859	-	ENSPTRP00000066804	952 (aa)	-	A0A2I3RQ45
ENSPTRT00000014551	-	5379	XM_016929640	ENSPTRP00000013482	1792 (aa)	XP_016785129	K7BJY2
ENSPTRT00000105582	-	5277	XM_016929641	ENSPTRP00000068102	1758 (aa)	XP_016785130	K7C8F3
ENSPTRT00000108021	-	5301	-	ENSPTRP00000088814	1766 (aa)	-	A0A2I3THW0

Gene Model

Click here to download ENSPTRG00000007897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000007897's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000007897	RBBP6	100	99.769	ENSG00000122257	RBBP6	100	100.000	Homo_sapiens
ENSPTRG00000007897	RBBP6	96	96.296	ENSAMEG00000009312	RBBP6	98	92.125	Ailuropoda_melanoleuca
ENSPTRG00000007897	RBBP6	100	99.306	ENSANAG00000037384	RBBP6	100	97.881	Aotus_nancymaae
ENSPTRG00000007897	RBBP6	100	98.611	ENSBTAG00000009441	RBBP6	67	91.528	Bos_taurus
ENSPTRG00000007897	RBBP6	100	97.267	ENSCJAG00000020661	RBBP6	100	97.267	Callithrix_jacchus
ENSPTRG00000007897	RBBP6	96	97.454	ENSCAFG00000017566	RBBP6	98	94.318	Canis_familiaris
ENSPTRG00000007897	RBBP6	100	98.148	ENSCHIG00000013732	RBBP6	68	91.362	Capra_hircus
ENSPTRG00000007897	RBBP6	100	98.148	ENSTSYG00000000822	RBBP6	100	98.148	Carlito_syrichta
ENSPTRG00000007897	RBBP6	91	86.475	ENSCAPG00000012399	RBBP6	96	89.948	Cavia_aperea
ENSPTRG00000007897	RBBP6	96	91.705	ENSCPOG00000040025	RBBP6	98	91.183	Cavia_porcellus
ENSPTRG00000007897	RBBP6	100	99.306	ENSCCAG00000023229	RBBP6	100	99.306	Cebus_capucinus
ENSPTRG00000007897	RBBP6	100	99.306	ENSCATG00000033601	RBBP6	100	99.306	Cercocebus_atys
ENSPTRG00000007897	RBBP6	96	95.853	ENSCLAG00000009872	RBBP6	98	90.847	Chinchilla_lanigera
ENSPTRG00000007897	RBBP6	100	99.537	ENSCSAG00000006609	RBBP6	100	98.605	Chlorocebus_sabaeus
ENSPTRG00000007897	RBBP6	92	98.148	ENSCHOG00000000278	RBBP6	76	93.190	Choloepus_hoffmanni
ENSPTRG00000007897	RBBP6	96	86.480	ENSCPBG00000001818	RBBP6	95	80.460	Chrysemys_picta_bellii
ENSPTRG00000007897	RBBP6	100	99.074	ENSCANG00000039613	RBBP6	100	99.074	Colobus_angolensis_palliatus
ENSPTRG00000007897	RBBP6	89	96.296	ENSCGRG00001017193	Rbbp6	94	89.663	Cricetulus_griseus_chok1gshd
ENSPTRG00000007897	RBBP6	89	96.296	ENSCGRG00000011887	Rbbp6	94	89.663	Cricetulus_griseus_crigri
ENSPTRG00000007897	RBBP6	100	97.685	ENSDNOG00000048802	RBBP6	100	93.977	Dasypus_novemcinctus
ENSPTRG00000007897	RBBP6	96	89.890	ENSDORG00000010285	Rbbp6	96	90.094	Dipodomys_ordii
ENSPTRG00000007897	RBBP6	90	88.582	ENSEEUG00000001683	RBBP6	94	91.341	Erinaceus_europaeus
ENSPTRG00000007897	RBBP6	94	94.316	ENSFCAG00000043694	RBBP6	94	94.267	Felis_catus
ENSPTRG00000007897	RBBP6	96	78.186	ENSFALG00000003750	RBBP6	53	78.681	Ficedula_albicollis
ENSPTRG00000007897	RBBP6	98	92.281	ENSFDAG00000013132	RBBP6	98	92.504	Fukomys_damarensis
ENSPTRG00000007897	RBBP6	96	85.126	ENSGALG00000006043	RBBP6	86	79.507	Gallus_gallus
ENSPTRG00000007897	RBBP6	96	87.413	ENSGAGG00000004371	RBBP6	95	80.189	Gopherus_agassizii
ENSPTRG00000007897	RBBP6	100	99.537	ENSGGOG00000007137	RBBP6	100	99.537	Gorilla_gorilla
ENSPTRG00000007897	RBBP6	92	97.449	ENSHGLG00000008327	RBBP6	98	91.809	Heterocephalus_glaber_female
ENSPTRG00000007897	RBBP6	92	94.470	ENSHGLG00100007773	RBBP6	98	86.851	Heterocephalus_glaber_male
ENSPTRG00000007897	RBBP6	100	98.380	ENSSTOG00000016006	RBBP6	100	94.757	Ictidomys_tridecemlineatus
ENSPTRG00000007897	RBBP6	96	92.824	ENSJJAG00000014549	Rbbp6	96	88.811	Jaculus_jaculus
ENSPTRG00000007897	RBBP6	95	86.047	ENSLACG00000012333	RBBP6	63	58.663	Latimeria_chalumnae
ENSPTRG00000007897	RBBP6	84	73.661	ENSLOCG00000005487	RBBP6	95	53.815	Lepisosteus_oculatus
ENSPTRG00000007897	RBBP6	100	96.991	ENSLAFG00000009528	RBBP6	100	93.530	Loxodonta_africana
ENSPTRG00000007897	RBBP6	100	99.537	ENSMFAG00000038627	RBBP6	100	99.537	Macaca_fascicularis
ENSPTRG00000007897	RBBP6	100	99.537	ENSMMUG00000015908	RBBP6	100	99.537	Macaca_mulatta
ENSPTRG00000007897	RBBP6	100	99.537	ENSMNEG00000033630	RBBP6	100	99.537	Macaca_nemestrina
ENSPTRG00000007897	RBBP6	100	99.537	ENSMLEG00000030073	RBBP6	100	99.537	Mandrillus_leucophaeus
ENSPTRG00000007897	RBBP6	94	95.732	ENSMICG00000008059	RBBP6	100	98.611	Microcebus_murinus
ENSPTRG00000007897	RBBP6	94	80.147	ENSMODG00000016318	-	100	80.884	Monodelphis_domestica
ENSPTRG00000007897	RBBP6	74	95.122	MGP_CAROLIEiJ_G0030424	-	100	95.844	Mus_caroli
ENSPTRG00000007897	RBBP6	89	96.767	ENSMUSG00000030779	Rbbp6	98	86.482	Mus_musculus
ENSPTRG00000007897	RBBP6	96	95.612	MGP_PahariEiJ_G0013634	Rbbp6	94	87.898	Mus_pahari
ENSPTRG00000007897	RBBP6	89	96.536	MGP_SPRETEiJ_G0031538	Rbbp6	94	88.305	Mus_spretus
ENSPTRG00000007897	RBBP6	96	96.759	ENSMPUG00000012318	RBBP6	65	91.652	Mustela_putorius_furo
ENSPTRG00000007897	RBBP6	89	96.991	ENSMLUG00000010601	-	94	91.558	Myotis_lucifugus
ENSPTRG00000007897	RBBP6	88	94.444	ENSNGAG00000002381	Rbbp6	62	86.842	Nannospalax_galili
ENSPTRG00000007897	RBBP6	100	99.537	ENSNLEG00000011896	RBBP6	100	99.537	Nomascus_leucogenys
ENSPTRG00000007897	RBBP6	88	82.143	ENSMEUG00000014491	RBBP6	88	82.143	Notamacropus_eugenii
ENSPTRG00000007897	RBBP6	78	95.833	ENSOPRG00000016272	RBBP6	59	99.415	Ochotona_princeps
ENSPTRG00000007897	RBBP6	88	93.750	ENSODEG00000012319	RBBP6	96	86.605	Octodon_degus
ENSPTRG00000007897	RBBP6	94	78.972	ENSOANG00000007673	RBBP6	96	79.058	Ornithorhynchus_anatinus
ENSPTRG00000007897	RBBP6	97	98.148	ENSOCUG00000004346	RBBP6	97	90.544	Oryctolagus_cuniculus
ENSPTRG00000007897	RBBP6	100	98.611	ENSOGAG00000026986	RBBP6	100	96.265	Otolemur_garnettii
ENSPTRG00000007897	RBBP6	100	98.148	ENSOARG00000017741	RBBP6	67	91.113	Ovis_aries
ENSPTRG00000007897	RBBP6	100	100.000	ENSPPAG00000023595	RBBP6	100	99.943	Pan_paniscus
ENSPTRG00000007897	RBBP6	94	94.198	ENSPPRG00000004074	RBBP6	94	94.149	Panthera_pardus
ENSPTRG00000007897	RBBP6	94	94.139	ENSPTIG00000010342	RBBP6	94	94.090	Panthera_tigris_altaica
ENSPTRG00000007897	RBBP6	100	99.306	ENSPANG00000019625	RBBP6	100	99.306	Papio_anubis
ENSPTRG00000007897	RBBP6	91	81.443	ENSPSIG00000004108	RBBP6	51	80.928	Pelodiscus_sinensis
ENSPTRG00000007897	RBBP6	89	91.892	ENSPCIG00000014000	RBBP6	94	83.255	Phascolarctos_cinereus
ENSPTRG00000007897	RBBP6	100	99.769	ENSPPYG00000007201	RBBP6	100	98.749	Pongo_abelii
ENSPTRG00000007897	RBBP6	100	95.873	ENSPCOG00000021939	RBBP6	100	98.380	Propithecus_coquereli
ENSPTRG00000007897	RBBP6	93	90.972	ENSPVAG00000001110	RBBP6	83	90.520	Pteropus_vampyrus
ENSPTRG00000007897	RBBP6	96	96.767	ENSRNOG00000012806	Rbbp6	94	88.496	Rattus_norvegicus
ENSPTRG00000007897	RBBP6	100	94.013	ENSRBIG00000004517	RBBP6	100	95.402	Rhinopithecus_bieti
ENSPTRG00000007897	RBBP6	100	99.537	ENSRROG00000032092	RBBP6	100	99.537	Rhinopithecus_roxellana
ENSPTRG00000007897	RBBP6	100	97.323	ENSSBOG00000021666	RBBP6	100	97.323	Saimiri_boliviensis_boliviensis
ENSPTRG00000007897	RBBP6	89	94.651	ENSSHAG00000004727	-	100	84.992	Sarcophilus_harrisii
ENSPTRG00000007897	RBBP6	82	81.081	ENSSFOG00015014316	RBBP6	83	65.703	Scleropages_formosus
ENSPTRG00000007897	RBBP6	90	97.321	ENSSARG00000004977	RBBP6	100	89.305	Sorex_araneus
ENSPTRG00000007897	RBBP6	83	73.875	ENSSPUG00000010682	RBBP6	89	82.493	Sphenodon_punctatus
ENSPTRG00000007897	RBBP6	100	97.454	ENSSSCG00000007830	RBBP6	100	93.148	Sus_scrofa
ENSPTRG00000007897	RBBP6	100	93.519	ENSTTRG00000002696	RBBP6	94	92.099	Tursiops_truncatus
ENSPTRG00000007897	RBBP6	96	94.907	ENSUMAG00000008537	RBBP6	98	92.727	Ursus_maritimus
ENSPTRG00000007897	RBBP6	67	94.013	ENSVPAG00000006458	RBBP6	79	94.013	Vicugna_pacos
ENSPTRG00000007897	RBBP6	96	97.454	ENSVVUG00000005484	RBBP6	98	94.318	Vulpes_vulpes