EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000007898 (Gene tree)
Gene ID: 453997
Gene Symbol: TNRC6A
Alias: -
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 51144 bases
Position: chr16:24234678-24285821
Accession: 5945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000047103	Ago_hook	PF10427.9	1.1e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000044206	-	5814	XM_016929644	ENSPTRP00000047103	1937 (aa)	XP_016785133	H2R4F2

Gene Model

Click here to download ENSPTRG00000007898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000007898's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000007898	TNRC6A	98	38.641	ENSPTRG00000047826	TNRC6B	99	36.125
ENSPTRG00000007898	TNRC6A	99	42.558	ENSPTRG00000009699	TNRC6C	98	44.233

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000007898	TNRC6A	99	97.852	ENSG00000090905	TNRC6A	99	97.852	Homo_sapiens
ENSPTRG00000007898	TNRC6A	99	96.042	ENSAMEG00000009333	TNRC6A	99	96.042	Ailuropoda_melanoleuca
ENSPTRG00000007898	TNRC6A	99	81.672	ENSAPLG00000009978	TNRC6A	100	81.672	Anas_platyrhynchos
ENSPTRG00000007898	TNRC6A	95	55.199	ENSACAG00000011857	TNRC6A	94	57.329	Anolis_carolinensis
ENSPTRG00000007898	TNRC6A	99	97.769	ENSANAG00000025252	TNRC6A	99	97.717	Aotus_nancymaae
ENSPTRG00000007898	TNRC6A	92	56.257	ENSAMXG00000019919	tnrc6a	99	55.838	Astyanax_mexicanus
ENSPTRG00000007898	TNRC6A	99	94.712	ENSBTAG00000017999	TNRC6A	99	94.712	Bos_taurus
ENSPTRG00000007898	TNRC6A	99	98.439	ENSCJAG00000020677	TNRC6A	99	97.188	Callithrix_jacchus
ENSPTRG00000007898	TNRC6A	99	95.573	ENSCAFG00000017531	TNRC6A	99	94.169	Canis_familiaris
ENSPTRG00000007898	TNRC6A	99	94.723	ENSCAFG00020021160	TNRC6A	99	94.619	Canis_lupus_dingo
ENSPTRG00000007898	TNRC6A	99	92.059	ENSCHIG00000019448	TNRC6A	99	91.693	Capra_hircus
ENSPTRG00000007898	TNRC6A	99	96.552	ENSTSYG00000012711	TNRC6A	99	96.552	Carlito_syrichta
ENSPTRG00000007898	TNRC6A	99	92.604	ENSCPOG00000036684	TNRC6A	99	91.304	Cavia_porcellus
ENSPTRG00000007898	TNRC6A	99	98.233	ENSCCAG00000033664	TNRC6A	99	98.233	Cebus_capucinus
ENSPTRG00000007898	TNRC6A	99	97.374	ENSCATG00000019284	TNRC6A	98	97.374	Cercocebus_atys
ENSPTRG00000007898	TNRC6A	99	88.906	ENSCLAG00000010217	TNRC6A	99	87.468	Chinchilla_lanigera
ENSPTRG00000007898	TNRC6A	99	97.187	ENSCSAG00000006561	TNRC6A	99	97.187	Chlorocebus_sabaeus
ENSPTRG00000007898	TNRC6A	94	91.627	ENSCHOG00000009374	TNRC6A	92	91.627	Choloepus_hoffmanni
ENSPTRG00000007898	TNRC6A	92	80.124	ENSCPBG00000001881	TNRC6A	99	80.180	Chrysemys_picta_bellii
ENSPTRG00000007898	TNRC6A	99	97.086	ENSCANG00000041549	TNRC6A	99	97.086	Colobus_angolensis_palliatus
ENSPTRG00000007898	TNRC6A	99	94.020	ENSCGRG00001015021	Tnrc6a	100	93.968	Cricetulus_griseus_chok1gshd
ENSPTRG00000007898	TNRC6A	99	90.994	ENSCGRG00000013351	Tnrc6a	99	89.514	Cricetulus_griseus_crigri
ENSPTRG00000007898	TNRC6A	92	56.420	ENSDARG00000079688	tnrc6a	99	56.451	Danio_rerio
ENSPTRG00000007898	TNRC6A	99	92.987	ENSDNOG00000013989	TNRC6A	99	92.987	Dasypus_novemcinctus
ENSPTRG00000007898	TNRC6A	99	84.948	ENSETEG00000014658	TNRC6A	99	84.896	Echinops_telfairi
ENSPTRG00000007898	TNRC6A	99	95.838	ENSEASG00005017693	TNRC6A	99	95.838	Equus_asinus_asinus
ENSPTRG00000007898	TNRC6A	99	95.940	ENSECAG00000025056	TNRC6A	99	95.888	Equus_caballus
ENSPTRG00000007898	TNRC6A	99	89.068	ENSEEUG00000004530	TNRC6A	99	88.808	Erinaceus_europaeus
ENSPTRG00000007898	TNRC6A	99	94.375	ENSFCAG00000025236	TNRC6A	99	94.375	Felis_catus
ENSPTRG00000007898	TNRC6A	99	78.839	ENSFALG00000003757	TNRC6A	97	79.239	Ficedula_albicollis
ENSPTRG00000007898	TNRC6A	92	80.437	ENSGALG00000006068	TNRC6A	99	80.549	Gallus_gallus
ENSPTRG00000007898	TNRC6A	92	79.642	ENSGAGG00000023209	TNRC6A	99	79.698	Gopherus_agassizii
ENSPTRG00000007898	TNRC6A	100	99.277	ENSGGOG00000005137	TNRC6A	100	99.277	Gorilla_gorilla
ENSPTRG00000007898	TNRC6A	99	91.411	ENSHGLG00000012474	-	99	90.210	Heterocephalus_glaber_female
ENSPTRG00000007898	TNRC6A	95	73.210	ENSHGLG00000007368	-	93	72.930	Heterocephalus_glaber_female
ENSPTRG00000007898	TNRC6A	99	90.715	ENSHGLG00100012496	-	99	89.574	Heterocephalus_glaber_male
ENSPTRG00000007898	TNRC6A	99	95.990	ENSSTOG00000023394	TNRC6A	98	94.476	Ictidomys_tridecemlineatus
ENSPTRG00000007898	TNRC6A	99	69.322	ENSLACG00000006277	TNRC6A	100	70.041	Latimeria_chalumnae
ENSPTRG00000007898	TNRC6A	99	83.223	ENSLOCG00000005517	tnrc6a	90	83.223	Lepisosteus_oculatus
ENSPTRG00000007898	TNRC6A	99	91.411	ENSLAFG00000004209	TNRC6A	99	91.567	Loxodonta_africana
ENSPTRG00000007898	TNRC6A	99	97.265	ENSMFAG00000003824	TNRC6A	99	97.265	Macaca_fascicularis
ENSPTRG00000007898	TNRC6A	99	97.343	ENSMMUG00000020428	TNRC6A	99	97.343	Macaca_mulatta
ENSPTRG00000007898	TNRC6A	99	97.238	ENSMNEG00000034854	TNRC6A	99	97.238	Macaca_nemestrina
ENSPTRG00000007898	TNRC6A	99	96.262	ENSMLEG00000042737	TNRC6A	98	96.262	Mandrillus_leucophaeus
ENSPTRG00000007898	TNRC6A	99	79.959	ENSMGAG00000006455	TNRC6A	93	82.595	Meleagris_gallopavo
ENSPTRG00000007898	TNRC6A	99	91.202	ENSMAUG00000012750	Tnrc6a	99	89.775	Mesocricetus_auratus
ENSPTRG00000007898	TNRC6A	99	97.448	ENSMICG00000030685	TNRC6A	99	96.901	Microcebus_murinus
ENSPTRG00000007898	TNRC6A	99	91.771	ENSMOCG00000000152	Tnrc6a	99	90.281	Microtus_ochrogaster
ENSPTRG00000007898	TNRC6A	99	81.342	ENSMODG00000016348	TNRC6A	96	81.647	Monodelphis_domestica
ENSPTRG00000007898	TNRC6A	99	90.104	MGP_CAROLIEiJ_G0030425	Tnrc6a	100	94.639	Mus_caroli
ENSPTRG00000007898	TNRC6A	99	90.729	ENSMUSG00000052707	Tnrc6a	99	94.996	Mus_musculus
ENSPTRG00000007898	TNRC6A	99	90.942	MGP_PahariEiJ_G0013635	Tnrc6a	100	95.282	Mus_pahari
ENSPTRG00000007898	TNRC6A	99	93.229	MGP_SPRETEiJ_G0031539	Tnrc6a	100	94.996	Mus_spretus
ENSPTRG00000007898	TNRC6A	99	81.605	ENSMPUG00000012324	TNRC6A	100	81.553	Mustela_putorius_furo
ENSPTRG00000007898	TNRC6A	99	92.476	ENSMLUG00000002701	TNRC6A	100	92.424	Myotis_lucifugus
ENSPTRG00000007898	TNRC6A	99	92.452	ENSNGAG00000020702	Tnrc6a	99	91.249	Nannospalax_galili
ENSPTRG00000007898	TNRC6A	99	96.543	ENSNLEG00000011851	TNRC6A	99	96.543	Nomascus_leucogenys
ENSPTRG00000007898	TNRC6A	76	89.480	ENSMEUG00000015959	-	74	89.480	Notamacropus_eugenii
ENSPTRG00000007898	TNRC6A	95	99.254	ENSOPRG00000005819	TNRC6A	95	99.254	Ochotona_princeps
ENSPTRG00000007898	TNRC6A	99	87.051	ENSODEG00000012802	TNRC6A	98	86.929	Octodon_degus
ENSPTRG00000007898	TNRC6A	88	83.198	ENSOANG00000007672	TNRC6A	99	83.197	Ornithorhynchus_anatinus
ENSPTRG00000007898	TNRC6A	99	92.742	ENSOCUG00000004325	TNRC6A	100	92.689	Oryctolagus_cuniculus
ENSPTRG00000007898	TNRC6A	99	96.514	ENSOGAG00000006666	TNRC6A	98	96.514	Otolemur_garnettii
ENSPTRG00000007898	TNRC6A	99	93.818	ENSOARG00000017950	TNRC6A	99	92.927	Ovis_aries
ENSPTRG00000007898	TNRC6A	100	99.742	ENSPPAG00000028379	TNRC6A	100	99.742	Pan_paniscus
ENSPTRG00000007898	TNRC6A	99	94.375	ENSPPRG00000005861	TNRC6A	99	93.043	Panthera_pardus
ENSPTRG00000007898	TNRC6A	99	93.854	ENSPTIG00000006346	TNRC6A	99	92.430	Panthera_tigris_altaica
ENSPTRG00000007898	TNRC6A	99	94.997	ENSPANG00000018523	TNRC6A	99	94.997	Papio_anubis
ENSPTRG00000007898	TNRC6A	88	75.862	ENSPKIG00000012859	tnrc6a	68	48.440	Paramormyrops_kingsleyae
ENSPTRG00000007898	TNRC6A	78	75.147	ENSPSIG00000003965	TNRC6A	100	75.213	Pelodiscus_sinensis
ENSPTRG00000007898	TNRC6A	99	91.771	ENSPEMG00000016318	Tnrc6a	99	90.179	Peromyscus_maniculatus_bairdii
ENSPTRG00000007898	TNRC6A	99	83.377	ENSPCIG00000012106	TNRC6A	99	83.585	Phascolarctos_cinereus
ENSPTRG00000007898	TNRC6A	99	97.289	ENSPPYG00000007202	TNRC6A	99	97.289	Pongo_abelii
ENSPTRG00000007898	TNRC6A	94	100.000	ENSPCAG00000008260	TNRC6A	94	100.000	Procavia_capensis
ENSPTRG00000007898	TNRC6A	99	95.104	ENSPCOG00000010134	TNRC6A	99	93.606	Propithecus_coquereli
ENSPTRG00000007898	TNRC6A	88	70.877	ENSPVAG00000012066	TNRC6A	97	70.936	Pteropus_vampyrus
ENSPTRG00000007898	TNRC6A	99	94.047	ENSRNOG00000024737	Tnrc6a	98	93.681	Rattus_norvegicus
ENSPTRG00000007898	TNRC6A	99	98.542	ENSRBIG00000014222	TNRC6A	99	98.542	Rhinopithecus_bieti
ENSPTRG00000007898	TNRC6A	99	96.982	ENSRROG00000032360	TNRC6A	99	96.982	Rhinopithecus_roxellana
ENSPTRG00000007898	TNRC6A	99	97.496	ENSSBOG00000036197	TNRC6A	100	99.356	Saimiri_boliviensis_boliviensis
ENSPTRG00000007898	TNRC6A	92	81.707	ENSSHAG00000008811	TNRC6A	99	81.929	Sarcophilus_harrisii
ENSPTRG00000007898	TNRC6A	88	67.216	ENSSFOG00015008920	tnrc6a	99	63.759	Scleropages_formosus
ENSPTRG00000007898	TNRC6A	73	83.877	ENSSARG00000002479	TNRC6A	89	83.152	Sorex_araneus
ENSPTRG00000007898	TNRC6A	91	78.891	ENSSPUG00000010525	TNRC6A	100	78.891	Sphenodon_punctatus
ENSPTRG00000007898	TNRC6A	99	93.281	ENSSSCG00000038870	TNRC6A	100	97.659	Sus_scrofa
ENSPTRG00000007898	TNRC6A	99	77.680	ENSTGUG00000006142	TNRC6A	98	77.537	Taeniopygia_guttata
ENSPTRG00000007898	TNRC6A	99	94.271	ENSTBEG00000014965	TNRC6A	99	94.271	Tupaia_belangeri
ENSPTRG00000007898	TNRC6A	93	97.950	ENSTTRG00000002008	TNRC6A	90	97.950	Tursiops_truncatus
ENSPTRG00000007898	TNRC6A	81	91.439	ENSUAMG00000006656	-	94	91.439	Ursus_americanus
ENSPTRG00000007898	TNRC6A	99	95.831	ENSUMAG00000008274	TNRC6A	100	95.387	Ursus_maritimus
ENSPTRG00000007898	TNRC6A	56	85.382	ENSVPAG00000010764	-	55	85.382	Vicugna_pacos
ENSPTRG00000007898	TNRC6A	95	100.000	ENSVVUG00000005380	TNRC6A	99	95.892	Vulpes_vulpes
ENSPTRG00000007898	TNRC6A	95	65.771	ENSXETG00000030437	TNRC6A	99	66.019	Xenopus_tropicalis