EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000008108 (Gene tree)
Gene ID: 473281
Gene Symbol: SALL1
Alias: -
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 16507 bases
Position: chr16:41705264-41721770
Accession: 13764
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000013842	zf-C2H2	PF00096.26	6.8e-34	1	6
ENSPTRP00000013842	zf-C2H2	PF00096.26	6.8e-34	2	6
ENSPTRP00000013842	zf-C2H2	PF00096.26	6.8e-34	3	6
ENSPTRP00000013842	zf-C2H2	PF00096.26	6.8e-34	4	6
ENSPTRP00000013842	zf-C2H2	PF00096.26	6.8e-34	5	6
ENSPTRP00000013842	zf-C2H2	PF00096.26	6.8e-34	6	6
ENSPTRP00000064582	zf-C2H2	PF00096.26	7e-34	1	6
ENSPTRP00000064582	zf-C2H2	PF00096.26	7e-34	2	6
ENSPTRP00000064582	zf-C2H2	PF00096.26	7e-34	3	6
ENSPTRP00000064582	zf-C2H2	PF00096.26	7e-34	4	6
ENSPTRP00000064582	zf-C2H2	PF00096.26	7e-34	5	6
ENSPTRP00000064582	zf-C2H2	PF00096.26	7e-34	6	6
ENSPTRP00000013842	zf-met	PF12874.7	1.5e-24	1	5
ENSPTRP00000013842	zf-met	PF12874.7	1.5e-24	2	5
ENSPTRP00000013842	zf-met	PF12874.7	1.5e-24	3	5
ENSPTRP00000013842	zf-met	PF12874.7	1.5e-24	4	5
ENSPTRP00000013842	zf-met	PF12874.7	1.5e-24	5	5
ENSPTRP00000064582	zf-met	PF12874.7	1.6e-24	1	5
ENSPTRP00000064582	zf-met	PF12874.7	1.6e-24	2	5
ENSPTRP00000064582	zf-met	PF12874.7	1.6e-24	3	5
ENSPTRP00000064582	zf-met	PF12874.7	1.6e-24	4	5
ENSPTRP00000064582	zf-met	PF12874.7	1.6e-24	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000014949	-	3966	-	ENSPTRP00000013842	1321 (aa)	-	H2QB34
ENSPTRT00000091671	-	105	-	ENSPTRP00000070237	34 (aa)	-	A0A2I3RZW1
ENSPTRT00000096651	-	6356	XM_009430776	ENSPTRP00000064582	1326 (aa)	XP_009429051	A0A2I3RIT7

Gene Model

Click here to download ENSPTRG00000008108's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000008108's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000008108	SALL1	99	59.615	ENSPTRG00000013631	SALL4	94	59.615
ENSPTRG00000008108	SALL1	96	74.547	ENSPTRG00000045256	-	98	74.587
ENSPTRG00000008108	SALL1	92	53.378	ENSPTRG00000010126	SALL3	99	54.330

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000008108	SALL1	100	99.020	ENSG00000103449	SALL1	100	99.048	Homo_sapiens
ENSPTRG00000008108	SALL1	99	69.529	ENSAPOG00000022764	sall1a	99	69.081	Acanthochromis_polyacanthus
ENSPTRG00000008108	SALL1	100	92.657	ENSAMEG00000006817	SALL1	100	92.733	Ailuropoda_melanoleuca
ENSPTRG00000008108	SALL1	100	68.063	ENSACIG00000004231	sall1a	99	67.566	Amphilophus_citrinellus
ENSPTRG00000008108	SALL1	99	69.357	ENSAOCG00000002800	sall1a	99	68.909	Amphiprion_ocellaris
ENSPTRG00000008108	SALL1	99	69.357	ENSAPEG00000010179	sall1a	99	68.909	Amphiprion_percula
ENSPTRG00000008108	SALL1	100	68.335	ENSATEG00000003006	sall1a	100	67.862	Anabas_testudineus
ENSPTRG00000008108	SALL1	100	86.828	ENSAPLG00000003356	SALL1	99	87.197	Anas_platyrhynchos
ENSPTRG00000008108	SALL1	99	82.366	ENSACAG00000014399	SALL1	96	81.756	Anolis_carolinensis
ENSPTRG00000008108	SALL1	100	97.806	ENSANAG00000027238	SALL1	100	97.806	Aotus_nancymaae
ENSPTRG00000008108	SALL1	100	68.287	ENSACLG00000017148	sall1a	99	67.865	Astatotilapia_calliptera
ENSPTRG00000008108	SALL1	99	69.294	ENSAMXG00000018599	sall1a	99	69.179	Astyanax_mexicanus
ENSPTRG00000008108	SALL1	99	51.739	ENSAMXG00000017702	sall1b	99	52.164	Astyanax_mexicanus
ENSPTRG00000008108	SALL1	100	92.511	ENSBTAG00000008544	SALL1	100	92.511	Bos_taurus
ENSPTRG00000008108	SALL1	100	97.731	ENSCJAG00000001740	SALL1	100	97.731	Callithrix_jacchus
ENSPTRG00000008108	SALL1	100	93.675	ENSCAFG00000009755	SALL1	100	93.675	Canis_familiaris
ENSPTRG00000008108	SALL1	100	93.675	ENSCAFG00020002842	SALL1	100	93.675	Canis_lupus_dingo
ENSPTRG00000008108	SALL1	100	92.668	ENSCHIG00000026074	SALL1	100	91.831	Capra_hircus
ENSPTRG00000008108	SALL1	100	96.296	ENSTSYG00000029464	SALL1	100	95.934	Carlito_syrichta
ENSPTRG00000008108	SALL1	98	94.440	ENSCPOG00000006564	SALL1	100	93.923	Cavia_porcellus
ENSPTRG00000008108	SALL1	100	94.646	ENSCCAG00000001639	SALL1	100	94.550	Cebus_capucinus
ENSPTRG00000008108	SALL1	100	98.486	ENSCATG00000004982	SALL1	100	98.486	Cercocebus_atys
ENSPTRG00000008108	SALL1	100	95.307	ENSCLAG00000006380	SALL1	100	94.796	Chinchilla_lanigera
ENSPTRG00000008108	SALL1	100	97.350	ENSCSAG00000005319	SALL1	100	97.350	Chlorocebus_sabaeus
ENSPTRG00000008108	SALL1	69	94.862	ENSCHOG00000000800	-	69	94.862	Choloepus_hoffmanni
ENSPTRG00000008108	SALL1	100	87.358	ENSCPBG00000015924	SALL1	99	87.490	Chrysemys_picta_bellii
ENSPTRG00000008108	SALL1	100	98.410	ENSCANG00000036664	SALL1	100	98.410	Colobus_angolensis_palliatus
ENSPTRG00000008108	SALL1	100	90.656	ENSCGRG00001023314	-	100	90.916	Cricetulus_griseus_chok1gshd
ENSPTRG00000008108	SALL1	98	90.469	ENSCGRG00000009496	Sall1	100	90.734	Cricetulus_griseus_crigri
ENSPTRG00000008108	SALL1	100	66.914	ENSCSEG00000009349	sall1a	100	67.039	Cynoglossus_semilaevis
ENSPTRG00000008108	SALL1	90	67.056	ENSCVAG00000020513	sall1a	99	66.387	Cyprinodon_variegatus
ENSPTRG00000008108	SALL1	100	68.699	ENSDARG00000074319	sall1a	99	68.680	Danio_rerio
ENSPTRG00000008108	SALL1	99	46.756	ENSDARG00000075891	sall1b	99	45.942	Danio_rerio
ENSPTRG00000008108	SALL1	100	92.511	ENSDNOG00000016413	SALL1	100	92.663	Dasypus_novemcinctus
ENSPTRG00000008108	SALL1	98	92.741	ENSETEG00000015150	SALL1	100	92.510	Echinops_telfairi
ENSPTRG00000008108	SALL1	90	65.385	ENSEBUG00000011732	SALL1	90	65.385	Eptatretus_burgeri
ENSPTRG00000008108	SALL1	96	37.557	ENSEBUG00000008798	SALL1	69	44.444	Eptatretus_burgeri
ENSPTRG00000008108	SALL1	100	95.155	ENSEASG00005014602	SALL1	100	95.231	Equus_asinus_asinus
ENSPTRG00000008108	SALL1	91	93.317	ENSECAG00000011334	SALL1	99	93.317	Equus_caballus
ENSPTRG00000008108	SALL1	98	92.219	ENSEEUG00000002014	SALL1	100	91.988	Erinaceus_europaeus
ENSPTRG00000008108	SALL1	100	66.714	ENSELUG00000006159	sall1a	99	66.472	Esox_lucius
ENSPTRG00000008108	SALL1	99	51.407	ENSELUG00000017774	-	99	51.339	Esox_lucius
ENSPTRG00000008108	SALL1	100	91.623	ENSFCAG00000024654	SALL1	100	91.541	Felis_catus
ENSPTRG00000008108	SALL1	100	86.525	ENSFALG00000000074	SALL1	99	86.364	Ficedula_albicollis
ENSPTRG00000008108	SALL1	75	63.462	ENSFHEG00000008424	-	99	61.538	Fundulus_heteroclitus
ENSPTRG00000008108	SALL1	100	67.610	ENSFHEG00000012579	sall1a	99	67.141	Fundulus_heteroclitus
ENSPTRG00000008108	SALL1	100	66.493	ENSGMOG00000006103	sall1a	99	66.170	Gadus_morhua
ENSPTRG00000008108	SALL1	97	41.648	ENSGMOG00000013383	-	93	55.814	Gadus_morhua
ENSPTRG00000008108	SALL1	99	86.970	ENSGALG00000039238	SALL1	99	86.667	Gallus_gallus
ENSPTRG00000008108	SALL1	100	67.910	ENSGAFG00000009964	sall1a	99	67.564	Gambusia_affinis
ENSPTRG00000008108	SALL1	100	67.435	ENSGACG00000016702	sall1a	100	67.014	Gasterosteus_aculeatus
ENSPTRG00000008108	SALL1	100	86.980	ENSGAGG00000013979	SALL1	99	87.081	Gopherus_agassizii
ENSPTRG00000008108	SALL1	100	99.020	ENSGGOG00000000663	SALL1	100	99.020	Gorilla_gorilla
ENSPTRG00000008108	SALL1	100	68.287	ENSHBUG00000022005	sall1a	99	67.865	Haplochromis_burtoni
ENSPTRG00000008108	SALL1	100	95.079	ENSHGLG00000004288	-	100	94.570	Heterocephalus_glaber_female
ENSPTRG00000008108	SALL1	100	95.079	ENSHGLG00100017496	SALL1	100	94.570	Heterocephalus_glaber_male
ENSPTRG00000008108	SALL1	100	66.617	ENSHCOG00000000974	sall1a	99	66.073	Hippocampus_comes
ENSPTRG00000008108	SALL1	99	48.891	ENSIPUG00000022928	sall1b	99	48.478	Ictalurus_punctatus
ENSPTRG00000008108	SALL1	99	70.434	ENSIPUG00000016265	SALL1	99	70.060	Ictalurus_punctatus
ENSPTRG00000008108	SALL1	100	93.802	ENSSTOG00000020885	SALL1	100	93.348	Ictidomys_tridecemlineatus
ENSPTRG00000008108	SALL1	100	68.155	ENSKMAG00000016681	sall1a	99	67.838	Kryptolebias_marmoratus
ENSPTRG00000008108	SALL1	97	67.305	ENSLBEG00000012207	sall1a	95	66.667	Labrus_bergylta
ENSPTRG00000008108	SALL1	100	78.653	ENSLACG00000003556	SALL1	99	78.409	Latimeria_chalumnae
ENSPTRG00000008108	SALL1	97	39.544	ENSLACG00000014018	-	99	38.771	Latimeria_chalumnae
ENSPTRG00000008108	SALL1	99	74.570	ENSLOCG00000007283	sall1b	99	73.972	Lepisosteus_oculatus
ENSPTRG00000008108	SALL1	98	93.441	ENSLAFG00000015251	SALL1	100	92.747	Loxodonta_africana
ENSPTRG00000008108	SALL1	100	98.190	ENSMFAG00000003298	SALL1	100	98.190	Macaca_fascicularis
ENSPTRG00000008108	SALL1	93	98.047	ENSMMUG00000017200	SALL1	100	98.047	Macaca_mulatta
ENSPTRG00000008108	SALL1	93	97.966	ENSMNEG00000034770	SALL1	100	97.966	Macaca_nemestrina
ENSPTRG00000008108	SALL1	100	98.486	ENSMLEG00000036406	SALL1	100	98.486	Mandrillus_leucophaeus
ENSPTRG00000008108	SALL1	100	68.927	ENSMAMG00000004164	sall1a	100	68.456	Mastacembelus_armatus
ENSPTRG00000008108	SALL1	100	68.287	ENSMZEG00005006479	sall1a	99	67.865	Maylandia_zebra
ENSPTRG00000008108	SALL1	98	87.259	ENSMGAG00000004704	SALL1	99	86.950	Meleagris_gallopavo
ENSPTRG00000008108	SALL1	100	90.325	ENSMAUG00000019093	Sall1	100	90.091	Mesocricetus_auratus
ENSPTRG00000008108	SALL1	100	93.793	ENSMICG00000036486	SALL1	100	93.490	Microcebus_murinus
ENSPTRG00000008108	SALL1	100	68.209	ENSMMOG00000016400	sall1a	100	67.586	Mola_mola
ENSPTRG00000008108	SALL1	100	90.537	ENSMODG00000013114	SALL1	100	89.780	Monodelphis_domestica
ENSPTRG00000008108	SALL1	100	69.064	ENSMALG00000013400	sall1a	100	68.516	Monopterus_albus
ENSPTRG00000008108	SALL1	100	90.008	MGP_CAROLIEiJ_G0031362	Sall1	100	90.354	Mus_caroli
ENSPTRG00000008108	SALL1	100	89.715	ENSMUSG00000031665	Sall1	100	89.977	Mus_musculus
ENSPTRG00000008108	SALL1	100	89.422	MGP_PahariEiJ_G0022961	Sall1	100	89.744	Mus_pahari
ENSPTRG00000008108	SALL1	100	89.790	MGP_SPRETEiJ_G0032480	Sall1	100	90.053	Mus_spretus
ENSPTRG00000008108	SALL1	98	91.147	ENSMPUG00000003265	SALL1	96	90.993	Mustela_putorius_furo
ENSPTRG00000008108	SALL1	98	85.211	ENSMLUG00000015541	SALL1	100	85.287	Myotis_lucifugus
ENSPTRG00000008108	SALL1	100	68.362	ENSNBRG00000009307	sall1a	99	67.940	Neolamprologus_brichardi
ENSPTRG00000008108	SALL1	94	98.889	ENSNLEG00000001008	SALL1	100	98.889	Nomascus_leucogenys
ENSPTRG00000008108	SALL1	100	90.235	ENSMEUG00000012206	SALL1	100	89.251	Notamacropus_eugenii
ENSPTRG00000008108	SALL1	88	93.957	ENSOPRG00000005645	SALL1	74	93.957	Ochotona_princeps
ENSPTRG00000008108	SALL1	100	94.928	ENSODEG00000003685	SALL1	100	94.419	Octodon_degus
ENSPTRG00000008108	SALL1	100	68.661	ENSONIG00000002831	sall1a	99	68.240	Oreochromis_niloticus
ENSPTRG00000008108	SALL1	70	88.302	ENSOANG00000013399	SALL1	91	88.302	Ornithorhynchus_anatinus
ENSPTRG00000008108	SALL1	100	67.934	ENSORLG00000013827	sall1a	99	67.913	Oryzias_latipes
ENSPTRG00000008108	SALL1	100	67.860	ENSORLG00020020570	sall1a	99	67.838	Oryzias_latipes_hni
ENSPTRG00000008108	SALL1	100	67.934	ENSORLG00015018830	sall1a	99	67.732	Oryzias_latipes_hsok
ENSPTRG00000008108	SALL1	100	67.711	ENSOMEG00000016043	sall1a	99	67.689	Oryzias_melastigma
ENSPTRG00000008108	SALL1	100	94.721	ENSOGAG00000027316	SALL1	100	94.550	Otolemur_garnettii
ENSPTRG00000008108	SALL1	100	86.767	ENSOARG00000017583	SALL1	100	85.929	Ovis_aries
ENSPTRG00000008108	SALL1	98	73.960	ENSPPAG00000035136	-	99	73.960	Pan_paniscus
ENSPTRG00000008108	SALL1	99	98.934	ENSPPAG00000035657	SALL1	100	99.692	Pan_paniscus
ENSPTRG00000008108	SALL1	100	91.472	ENSPPRG00000023283	SALL1	100	91.390	Panthera_pardus
ENSPTRG00000008108	SALL1	83	96.000	ENSPTIG00000013539	-	96	96.000	Panthera_tigris_altaica
ENSPTRG00000008108	SALL1	100	98.410	ENSPANG00000024176	SALL1	100	98.410	Papio_anubis
ENSPTRG00000008108	SALL1	100	65.740	ENSPKIG00000005383	-	99	65.736	Paramormyrops_kingsleyae
ENSPTRG00000008108	SALL1	99	66.215	ENSPKIG00000022251	sall1a	99	65.914	Paramormyrops_kingsleyae
ENSPTRG00000008108	SALL1	100	86.374	ENSPSIG00000008582	SALL1	99	86.136	Pelodiscus_sinensis
ENSPTRG00000008108	SALL1	100	66.099	ENSPMGG00000021788	sall1a	100	65.784	Periophthalmus_magnuspinnatus
ENSPTRG00000008108	SALL1	99	51.126	ENSPMAG00000008148	sall1b	99	51.399	Petromyzon_marinus
ENSPTRG00000008108	SALL1	100	90.386	ENSPCIG00000017840	SALL1	100	89.402	Phascolarctos_cinereus
ENSPTRG00000008108	SALL1	98	67.703	ENSPFOG00000015799	sall1a	96	67.504	Poecilia_formosa
ENSPTRG00000008108	SALL1	100	67.761	ENSPLAG00000022539	sall1a	99	67.537	Poecilia_latipinna
ENSPTRG00000008108	SALL1	100	67.955	ENSPMEG00000020894	sall1a	99	67.638	Poecilia_mexicana
ENSPTRG00000008108	SALL1	100	67.809	ENSPREG00000006802	sall1a	99	67.491	Poecilia_reticulata
ENSPTRG00000008108	SALL1	90	98.726	ENSPPYG00000007345	SALL1	96	98.726	Pongo_abelii
ENSPTRG00000008108	SALL1	84	93.902	ENSPCAG00000008162	SALL1	93	93.902	Procavia_capensis
ENSPTRG00000008108	SALL1	100	94.852	ENSPCOG00000028192	SALL1	100	94.625	Propithecus_coquereli
ENSPTRG00000008108	SALL1	80	91.706	ENSPVAG00000015374	SALL1	100	92.299	Pteropus_vampyrus
ENSPTRG00000008108	SALL1	100	68.362	ENSPNYG00000010865	sall1a	99	67.940	Pundamilia_nyererei
ENSPTRG00000008108	SALL1	99	53.812	ENSPNAG00000007442	sall1b	99	53.812	Pygocentrus_nattereri
ENSPTRG00000008108	SALL1	99	67.713	ENSPNAG00000023644	sall1a	99	67.590	Pygocentrus_nattereri
ENSPTRG00000008108	SALL1	100	89.872	ENSRNOG00000013907	Sall1	100	89.759	Rattus_norvegicus
ENSPTRG00000008108	SALL1	93	98.203	ENSRBIG00000015707	SALL1	100	98.203	Rhinopithecus_bieti
ENSPTRG00000008108	SALL1	99	97.479	ENSRROG00000035777	SALL1	100	98.122	Rhinopithecus_roxellana
ENSPTRG00000008108	SALL1	100	97.657	ENSSBOG00000032186	SALL1	100	97.657	Saimiri_boliviensis_boliviensis
ENSPTRG00000008108	SALL1	100	89.048	ENSSHAG00000009477	SALL1	100	88.645	Sarcophilus_harrisii
ENSPTRG00000008108	SALL1	98	67.914	ENSSFOG00015001590	sall1a	99	67.712	Scleropages_formosus
ENSPTRG00000008108	SALL1	99	67.091	ENSSFOG00015020020	sall1a	99	66.891	Scleropages_formosus
ENSPTRG00000008108	SALL1	100	68.783	ENSSMAG00000009160	sall1a	100	68.280	Scophthalmus_maximus
ENSPTRG00000008108	SALL1	90	59.184	ENSSDUG00000000748	sall1b	84	59.184	Seriola_dumerili
ENSPTRG00000008108	SALL1	100	69.455	ENSSDUG00000006507	sall1a	100	68.852	Seriola_dumerili
ENSPTRG00000008108	SALL1	100	69.529	ENSSLDG00000017721	sall1a	100	68.927	Seriola_lalandi_dorsalis
ENSPTRG00000008108	SALL1	98	92.025	ENSSARG00000000661	SALL1	100	91.641	Sorex_araneus
ENSPTRG00000008108	SALL1	100	86.601	ENSSPUG00000000156	SALL1	99	86.364	Sphenodon_punctatus
ENSPTRG00000008108	SALL1	99	69.455	ENSSPAG00000021615	sall1a	99	68.932	Stegastes_partitus
ENSPTRG00000008108	SALL1	100	92.464	ENSSSCG00000002836	SALL1	100	92.464	Sus_scrofa
ENSPTRG00000008108	SALL1	99	86.894	ENSTGUG00000007514	SALL1	99	86.591	Taeniopygia_guttata
ENSPTRG00000008108	SALL1	91	66.857	ENSTRUG00000008950	sall1a	100	66.912	Takifugu_rubripes
ENSPTRG00000008108	SALL1	92	65.770	ENSTNIG00000004257	sall1a	100	65.689	Tetraodon_nigroviridis
ENSPTRG00000008108	SALL1	78	100.000	ENSTBEG00000002119	-	55	100.000	Tupaia_belangeri
ENSPTRG00000008108	SALL1	90	93.027	ENSUAMG00000023379	-	92	93.057	Ursus_americanus
ENSPTRG00000008108	SALL1	90	93.407	ENSVVUG00000019383	-	99	93.407	Vulpes_vulpes
ENSPTRG00000008108	SALL1	83	61.538	ENSXETG00000017176	sall2	64	61.538	Xenopus_tropicalis
ENSPTRG00000008108	SALL1	100	76.047	ENSXETG00000018417	sall1	99	75.903	Xenopus_tropicalis
ENSPTRG00000008108	SALL1	100	67.881	ENSXMAG00000016273	sall1a	99	67.489	Xiphophorus_maculatus