EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000008113 (Gene tree)
Gene ID: 454088
Gene Symbol: CHD9
Alias: -
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 186411 bases
Position: chr16:43744695-43931105
Accession: 5734
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000013848	ResIII	PF04851.15	8.4e-06	1	1
ENSPTRP00000086656	BRK	PF07533.16	1.8e-31	1	2
ENSPTRP00000086656	BRK	PF07533.16	1.8e-31	2	2
ENSPTRP00000013848	BRK	PF07533.16	1.9e-30	1	2
ENSPTRP00000013848	BRK	PF07533.16	1.9e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000097801	-	1374	-	ENSPTRP00000080147	457 (aa)	-	A0A2I3ST76
ENSPTRT00000014955	-	11788	XM_009430785	ENSPTRP00000013848	2898 (aa)	XP_009429060	A0A2J8MWW0
ENSPTRT00000083705	-	2892	-	ENSPTRP00000086656	963 (aa)	-	A0A2I3TCQ6

Gene Model

Click here to download ENSPTRG00000008113's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000008113's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000008113	CHD9	91	46.128	ENSPTRG00000013504	CHD6	99	71.927
ENSPTRG00000008113	CHD9	74	57.162	ENSPTRG00000006124	CHD8	81	68.559
ENSPTRG00000008113	CHD9	87	70.450	ENSPTRG00000020286	CHD7	84	66.688

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000008113	CHD9	100	99.827	ENSG00000177200	CHD9	100	100.000	Homo_sapiens
ENSPTRG00000008113	CHD9	93	69.751	ENSAPOG00000023034	chd9	99	60.248	Acanthochromis_polyacanthus
ENSPTRG00000008113	CHD9	100	97.802	ENSAMEG00000016232	CHD9	100	96.417	Ailuropoda_melanoleuca
ENSPTRG00000008113	CHD9	92	71.277	ENSACIG00000004097	chd9	73	61.282	Amphilophus_citrinellus
ENSPTRG00000008113	CHD9	93	69.366	ENSAOCG00000005487	chd9	67	75.179	Amphiprion_ocellaris
ENSPTRG00000008113	CHD9	93	70.107	ENSAPEG00000009859	chd9	99	61.410	Amphiprion_percula
ENSPTRG00000008113	CHD9	91	71.530	ENSATEG00000002748	chd9	99	62.232	Anabas_testudineus
ENSPTRG00000008113	CHD9	98	92.308	ENSAPLG00000002826	CHD9	74	86.063	Anas_platyrhynchos
ENSPTRG00000008113	CHD9	98	88.645	ENSACAG00000016150	CHD9	98	81.233	Anolis_carolinensis
ENSPTRG00000008113	CHD9	100	99.267	ENSANAG00000015630	CHD9	100	99.267	Aotus_nancymaae
ENSPTRG00000008113	CHD9	92	69.580	ENSACLG00000016899	chd9	73	63.462	Astatotilapia_calliptera
ENSPTRG00000008113	CHD9	98	70.526	ENSAMXG00000005652	chd9	68	74.760	Astyanax_mexicanus
ENSPTRG00000008113	CHD9	100	98.535	ENSBTAG00000002287	CHD9	100	95.762	Bos_taurus
ENSPTRG00000008113	CHD9	100	99.634	ENSCJAG00000001573	CHD9	100	99.634	Callithrix_jacchus
ENSPTRG00000008113	CHD9	100	98.535	ENSCAFG00000009699	CHD9	100	96.451	Canis_familiaris
ENSPTRG00000008113	CHD9	100	98.535	ENSCAFG00020002879	CHD9	100	98.535	Canis_lupus_dingo
ENSPTRG00000008113	CHD9	100	98.168	ENSTSYG00000007693	CHD9	100	98.168	Carlito_syrichta
ENSPTRG00000008113	CHD9	82	96.774	ENSCAPG00000011604	CHD9	81	79.597	Cavia_aperea
ENSPTRG00000008113	CHD9	100	97.436	ENSCPOG00000036544	CHD9	100	91.247	Cavia_porcellus
ENSPTRG00000008113	CHD9	100	98.901	ENSCCAG00000036178	CHD9	100	98.901	Cebus_capucinus
ENSPTRG00000008113	CHD9	100	99.634	ENSCATG00000036753	CHD9	100	99.634	Cercocebus_atys
ENSPTRG00000008113	CHD9	98	98.901	ENSCLAG00000007137	CHD9	99	97.457	Chinchilla_lanigera
ENSPTRG00000008113	CHD9	100	99.634	ENSCSAG00000005311	CHD9	100	99.070	Chlorocebus_sabaeus
ENSPTRG00000008113	CHD9	74	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSPTRG00000008113	CHD9	98	87.179	ENSCPBG00000012459	CHD9	99	91.763	Chrysemys_picta_bellii
ENSPTRG00000008113	CHD9	100	99.634	ENSCANG00000030349	CHD9	100	99.634	Colobus_angolensis_palliatus
ENSPTRG00000008113	CHD9	98	96.703	ENSCGRG00001016150	Chd9	99	91.837	Cricetulus_griseus_chok1gshd
ENSPTRG00000008113	CHD9	98	96.703	ENSCGRG00000012850	Chd9	99	96.185	Cricetulus_griseus_crigri
ENSPTRG00000008113	CHD9	93	69.204	ENSCSEG00000009209	chd9	67	72.484	Cynoglossus_semilaevis
ENSPTRG00000008113	CHD9	91	69.930	ENSCVAG00000016195	chd9	73	62.325	Cyprinodon_variegatus
ENSPTRG00000008113	CHD9	97	69.014	ENSDARG00000074498	chd9	67	73.918	Danio_rerio
ENSPTRG00000008113	CHD9	100	95.604	ENSDNOG00000006045	CHD9	100	95.281	Dasypus_novemcinctus
ENSPTRG00000008113	CHD9	100	94.872	ENSDORG00000008523	-	100	92.811	Dipodomys_ordii
ENSPTRG00000008113	CHD9	92	100.000	ENSETEG00000009565	CHD9	94	97.368	Echinops_telfairi
ENSPTRG00000008113	CHD9	100	96.313	ENSEASG00005014832	CHD9	100	96.313	Equus_asinus_asinus
ENSPTRG00000008113	CHD9	100	98.168	ENSECAG00000011505	CHD9	100	96.245	Equus_caballus
ENSPTRG00000008113	CHD9	83	97.790	ENSEEUG00000014515	CHD9	86	97.790	Erinaceus_europaeus
ENSPTRG00000008113	CHD9	94	71.228	ENSELUG00000006031	chd9	92	74.165	Esox_lucius
ENSPTRG00000008113	CHD9	100	98.168	ENSFCAG00000022534	CHD9	100	98.168	Felis_catus
ENSPTRG00000008113	CHD9	98	91.209	ENSFALG00000013276	CHD9	99	88.167	Ficedula_albicollis
ENSPTRG00000008113	CHD9	100	98.535	ENSFDAG00000021037	CHD9	100	94.452	Fukomys_damarensis
ENSPTRG00000008113	CHD9	91	68.551	ENSFHEG00000006068	chd9	68	74.716	Fundulus_heteroclitus
ENSPTRG00000008113	CHD9	82	68.729	ENSGMOG00000006040	chd9	83	76.866	Gadus_morhua
ENSPTRG00000008113	CHD9	96	85.838	ENSGALG00000039178	CHD9	98	86.162	Gallus_gallus
ENSPTRG00000008113	CHD9	93	69.231	ENSGAFG00000010014	chd9	99	59.538	Gambusia_affinis
ENSPTRG00000008113	CHD9	91	67.483	ENSGACG00000016694	chd9	68	74.741	Gasterosteus_aculeatus
ENSPTRG00000008113	CHD9	98	84.076	ENSGAGG00000001048	-	98	87.546	Gopherus_agassizii
ENSPTRG00000008113	CHD9	100	100.000	ENSGGOG00000014816	CHD9	100	100.000	Gorilla_gorilla
ENSPTRG00000008113	CHD9	92	70.175	ENSHBUG00000023322	chd9	96	69.930	Haplochromis_burtoni
ENSPTRG00000008113	CHD9	100	98.535	ENSHGLG00000014938	CHD9	99	97.919	Heterocephalus_glaber_female
ENSPTRG00000008113	CHD9	100	92.635	ENSHGLG00100007620	-	100	93.773	Heterocephalus_glaber_male
ENSPTRG00000008113	CHD9	91	68.858	ENSHCOG00000000937	chd9	69	73.448	Hippocampus_comes
ENSPTRG00000008113	CHD9	97	72.628	ENSIPUG00000016448	chd9	97	73.723	Ictalurus_punctatus
ENSPTRG00000008113	CHD9	100	97.436	ENSSTOG00000022273	CHD9	99	98.266	Ictidomys_tridecemlineatus
ENSPTRG00000008113	CHD9	100	97.436	ENSJJAG00000015741	-	100	94.138	Jaculus_jaculus
ENSPTRG00000008113	CHD9	92	71.378	ENSKMAG00000016784	chd9	96	61.248	Kryptolebias_marmoratus
ENSPTRG00000008113	CHD9	91	69.014	ENSLBEG00000012077	chd9	99	62.271	Labrus_bergylta
ENSPTRG00000008113	CHD9	98	73.521	ENSLACG00000005557	CHD9	73	72.122	Latimeria_chalumnae
ENSPTRG00000008113	CHD9	98	75.714	ENSLOCG00000007225	chd9	99	73.559	Lepisosteus_oculatus
ENSPTRG00000008113	CHD9	100	96.337	ENSLAFG00000015374	CHD9	100	95.212	Loxodonta_africana
ENSPTRG00000008113	CHD9	100	99.634	ENSMFAG00000041354	CHD9	100	99.634	Macaca_fascicularis
ENSPTRG00000008113	CHD9	100	99.634	ENSMMUG00000016310	CHD9	100	99.634	Macaca_mulatta
ENSPTRG00000008113	CHD9	100	99.267	ENSMNEG00000031494	CHD9	100	99.235	Macaca_nemestrina
ENSPTRG00000008113	CHD9	100	99.634	ENSMLEG00000043219	CHD9	100	99.634	Mandrillus_leucophaeus
ENSPTRG00000008113	CHD9	91	69.366	ENSMAMG00000003909	chd9	99	60.467	Mastacembelus_armatus
ENSPTRG00000008113	CHD9	92	70.175	ENSMZEG00005006581	chd9	99	61.290	Maylandia_zebra
ENSPTRG00000008113	CHD9	98	92.674	ENSMGAG00000004642	CHD9	72	80.952	Meleagris_gallopavo
ENSPTRG00000008113	CHD9	95	91.640	ENSMAUG00000000526	-	98	96.800	Mesocricetus_auratus
ENSPTRG00000008113	CHD9	100	97.436	ENSMICG00000016679	CHD9	100	97.436	Microcebus_murinus
ENSPTRG00000008113	CHD9	98	92.463	ENSMOCG00000010691	-	98	96.337	Microtus_ochrogaster
ENSPTRG00000008113	CHD9	91	70.671	ENSMMOG00000016406	chd9	74	63.045	Mola_mola
ENSPTRG00000008113	CHD9	98	84.615	ENSMODG00000013142	-	99	92.308	Monodelphis_domestica
ENSPTRG00000008113	CHD9	92	64.360	ENSMALG00000013306	chd9	73	62.432	Monopterus_albus
ENSPTRG00000008113	CHD9	98	95.238	MGP_CAROLIEiJ_G0031364	Chd9	99	90.701	Mus_caroli
ENSPTRG00000008113	CHD9	98	94.872	ENSMUSG00000056608	Chd9	99	95.376	Mus_musculus
ENSPTRG00000008113	CHD9	98	95.238	MGP_PahariEiJ_G0022964	Chd9	99	88.492	Mus_pahari
ENSPTRG00000008113	CHD9	98	94.505	MGP_SPRETEiJ_G0032483	Chd9	99	90.347	Mus_spretus
ENSPTRG00000008113	CHD9	100	98.168	ENSMPUG00000003285	CHD9	100	96.208	Mustela_putorius_furo
ENSPTRG00000008113	CHD9	100	98.535	ENSMLUG00000004456	CHD9	100	93.899	Myotis_lucifugus
ENSPTRG00000008113	CHD9	100	92.220	ENSNGAG00000015820	-	100	97.070	Nannospalax_galili
ENSPTRG00000008113	CHD9	92	70.922	ENSNBRG00000009423	chd9	99	60.948	Neolamprologus_brichardi
ENSPTRG00000008113	CHD9	90	99.463	ENSNLEG00000001026	CHD9	100	99.463	Nomascus_leucogenys
ENSPTRG00000008113	CHD9	76	96.078	ENSMEUG00000008222	-	84	96.078	Notamacropus_eugenii
ENSPTRG00000008113	CHD9	87	100.000	ENSOPRG00000011168	CHD9	85	97.429	Ochotona_princeps
ENSPTRG00000008113	CHD9	98	97.080	ENSODEG00000004466	CHD9	99	94.448	Octodon_degus
ENSPTRG00000008113	CHD9	93	69.825	ENSONIG00000002816	chd9	87	63.087	Oreochromis_niloticus
ENSPTRG00000008113	CHD9	100	93.091	ENSOANG00000013401	CHD9	100	86.915	Ornithorhynchus_anatinus
ENSPTRG00000008113	CHD9	100	97.070	ENSOCUG00000001016	CHD9	99	97.352	Oryctolagus_cuniculus
ENSPTRG00000008113	CHD9	92	70.139	ENSORLG00000013810	chd9	97	60.713	Oryzias_latipes
ENSPTRG00000008113	CHD9	92	73.118	ENSORLG00020020665	chd9	75	62.949	Oryzias_latipes_hni
ENSPTRG00000008113	CHD9	92	70.139	ENSORLG00015019126	chd9	96	61.080	Oryzias_latipes_hsok
ENSPTRG00000008113	CHD9	100	97.802	ENSOGAG00000002110	CHD9	100	95.110	Otolemur_garnettii
ENSPTRG00000008113	CHD9	100	96.739	ENSOARG00000017664	CHD9	100	95.456	Ovis_aries
ENSPTRG00000008113	CHD9	100	100.000	ENSPPAG00000039388	-	100	98.796	Pan_paniscus
ENSPTRG00000008113	CHD9	100	97.802	ENSPPRG00000004801	CHD9	100	97.802	Panthera_pardus
ENSPTRG00000008113	CHD9	100	95.105	ENSPTIG00000021854	CHD9	100	95.105	Panthera_tigris_altaica
ENSPTRG00000008113	CHD9	100	99.634	ENSPANG00000019307	CHD9	100	99.634	Papio_anubis
ENSPTRG00000008113	CHD9	90	73.022	ENSPKIG00000021876	chd9	68	76.675	Paramormyrops_kingsleyae
ENSPTRG00000008113	CHD9	94	69.580	ENSPKIG00000025401	-	71	62.776	Paramormyrops_kingsleyae
ENSPTRG00000008113	CHD9	64	84.865	ENSPSIG00000008099	CHD9	99	84.811	Pelodiscus_sinensis
ENSPTRG00000008113	CHD9	96	60.718	ENSPMGG00000021802	chd9	98	72.500	Periophthalmus_magnuspinnatus
ENSPTRG00000008113	CHD9	98	91.189	ENSPEMG00000021464	-	98	97.436	Peromyscus_maniculatus_bairdii
ENSPTRG00000008113	CHD9	65	61.538	ENSPMAG00000006035	-	72	67.923	Petromyzon_marinus
ENSPTRG00000008113	CHD9	89	88.165	ENSPCIG00000017215	CHD9	97	90.020	Phascolarctos_cinereus
ENSPTRG00000008113	CHD9	93	68.881	ENSPFOG00000015839	chd9	97	60.533	Poecilia_formosa
ENSPTRG00000008113	CHD9	93	69.611	ENSPLAG00000011118	chd9	97	60.560	Poecilia_latipinna
ENSPTRG00000008113	CHD9	93	69.965	ENSPMEG00000015106	chd9	96	61.009	Poecilia_mexicana
ENSPTRG00000008113	CHD9	93	69.611	ENSPREG00000006473	chd9	97	61.063	Poecilia_reticulata
ENSPTRG00000008113	CHD9	100	99.634	ENSPPYG00000007348	CHD9	100	99.586	Pongo_abelii
ENSPTRG00000008113	CHD9	77	96.415	ENSPCAG00000007564	CHD9	86	96.415	Procavia_capensis
ENSPTRG00000008113	CHD9	100	98.535	ENSPCOG00000028433	CHD9	100	98.535	Propithecus_coquereli
ENSPTRG00000008113	CHD9	97	94.038	ENSPVAG00000015617	CHD9	98	94.068	Pteropus_vampyrus
ENSPTRG00000008113	CHD9	92	70.175	ENSPNYG00000010947	chd9	66	75.537	Pundamilia_nyererei
ENSPTRG00000008113	CHD9	92	71.273	ENSPNAG00000024141	chd9	68	75.075	Pygocentrus_nattereri
ENSPTRG00000008113	CHD9	88	93.220	ENSRNOG00000049302	Chd9	100	90.476	Rattus_norvegicus
ENSPTRG00000008113	CHD9	100	99.634	ENSRBIG00000035553	CHD9	100	99.634	Rhinopithecus_bieti
ENSPTRG00000008113	CHD9	100	99.634	ENSRROG00000033278	CHD9	100	99.634	Rhinopithecus_roxellana
ENSPTRG00000008113	CHD9	100	98.901	ENSSBOG00000030240	CHD9	100	98.901	Saimiri_boliviensis_boliviensis
ENSPTRG00000008113	CHD9	98	91.273	ENSSHAG00000002719	CHD9	100	88.132	Sarcophilus_harrisii
ENSPTRG00000008113	CHD9	93	71.326	ENSSFOG00015001327	chd9	67	75.852	Scleropages_formosus
ENSPTRG00000008113	CHD9	93	72.500	ENSSFOG00015020209	chd9	99	69.979	Scleropages_formosus
ENSPTRG00000008113	CHD9	92	68.182	ENSSMAG00000008953	chd9	99	62.598	Scophthalmus_maximus
ENSPTRG00000008113	CHD9	91	70.775	ENSSDUG00000006139	chd9	98	68.249	Seriola_dumerili
ENSPTRG00000008113	CHD9	92	71.631	ENSSLDG00000017818	chd9	98	68.717	Seriola_lalandi_dorsalis
ENSPTRG00000008113	CHD9	100	96.324	ENSSARG00000010632	CHD9	71	97.774	Sorex_araneus
ENSPTRG00000008113	CHD9	98	85.775	ENSSPUG00000017465	-	98	90.842	Sphenodon_punctatus
ENSPTRG00000008113	CHD9	92	69.014	ENSSPAG00000021649	chd9	67	74.836	Stegastes_partitus
ENSPTRG00000008113	CHD9	90	85.621	ENSTGUG00000007476	CHD9	100	85.851	Taeniopygia_guttata
ENSPTRG00000008113	CHD9	97	72.143	ENSTRUG00000009125	chd9	73	62.904	Takifugu_rubripes
ENSPTRG00000008113	CHD9	75	67.606	ENSTNIG00000003825	chd9	87	81.951	Tetraodon_nigroviridis
ENSPTRG00000008113	CHD9	66	96.847	ENSTBEG00000016052	-	81	96.847	Tupaia_belangeri
ENSPTRG00000008113	CHD9	90	95.554	ENSTTRG00000012674	CHD9	90	95.554	Tursiops_truncatus
ENSPTRG00000008113	CHD9	100	98.535	ENSUAMG00000022706	CHD9	100	98.535	Ursus_americanus
ENSPTRG00000008113	CHD9	90	94.347	ENSUMAG00000004043	CHD9	98	98.401	Ursus_maritimus
ENSPTRG00000008113	CHD9	98	97.070	ENSVPAG00000001374	CHD9	97	95.247	Vicugna_pacos
ENSPTRG00000008113	CHD9	100	98.535	ENSVVUG00000019435	CHD9	100	96.520	Vulpes_vulpes
ENSPTRG00000008113	CHD9	98	80.952	ENSXETG00000000349	chd9	96	76.786	Xenopus_tropicalis
ENSPTRG00000008113	CHD9	93	69.611	ENSXCOG00000012997	chd9	67	75.030	Xiphophorus_couchianus
ENSPTRG00000008113	CHD9	93	69.231	ENSXMAG00000016192	chd9	97	61.061	Xiphophorus_maculatus