EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000008183 (Gene tree)
Gene ID: 454137
Gene Symbol: CNOT1
Alias: -
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 110236 bases
Position: chr16:49209922-49320157
Accession: 5742
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000013973	Not1	PF04054.15	1.7e-152	1	1
ENSPTRP00000085395	Not1	PF04054.15	2.4e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000102261	-	6981	-	ENSPTRP00000085395	2326 (aa)	-	A0A2I3T815
ENSPTRT00000105435	-	291	-	ENSPTRP00000083744	96 (aa)	-	A0A2I3T3E3
ENSPTRT00000015088	-	8480	XM_009430906	ENSPTRP00000013973	2383 (aa)	XP_009429181	H2QB87

Gene Model

Click here to download ENSPTRG00000008183's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000008183's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000008183	CNOT1	100	99.706	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSPTRG00000008183	CNOT1	97	95.972	ENSAPOG00000005042	cnot1	100	95.972	Acanthochromis_polyacanthus
ENSPTRG00000008183	CNOT1	100	99.203	ENSAMEG00000017298	CNOT1	100	99.203	Ailuropoda_melanoleuca
ENSPTRG00000008183	CNOT1	90	89.735	ENSACIG00000016003	cnot1	100	90.014	Amphilophus_citrinellus
ENSPTRG00000008183	CNOT1	100	90.289	ENSAPEG00000022342	cnot1	100	90.205	Amphiprion_percula
ENSPTRG00000008183	CNOT1	97	96.111	ENSATEG00000012892	cnot1	100	96.111	Anabas_testudineus
ENSPTRG00000008183	CNOT1	100	97.361	ENSAPLG00000007162	CNOT1	100	97.361	Anas_platyrhynchos
ENSPTRG00000008183	CNOT1	92	95.965	ENSACAG00000001602	CNOT1	98	95.918	Anolis_carolinensis
ENSPTRG00000008183	CNOT1	100	98.538	ENSANAG00000038198	CNOT1	100	98.538	Aotus_nancymaae
ENSPTRG00000008183	CNOT1	97	96.111	ENSACLG00000014234	cnot1	100	96.111	Astatotilapia_calliptera
ENSPTRG00000008183	CNOT1	100	90.646	ENSAMXG00000013170	cnot1	100	90.860	Astyanax_mexicanus
ENSPTRG00000008183	CNOT1	100	99.454	ENSBTAG00000020782	CNOT1	100	99.454	Bos_taurus
ENSPTRG00000008183	CNOT1	82	40.277	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSPTRG00000008183	CNOT1	100	99.580	ENSCJAG00000011318	CNOT1	100	99.580	Callithrix_jacchus
ENSPTRG00000008183	CNOT1	100	99.121	ENSCAFG00000008426	CNOT1	100	99.121	Canis_familiaris
ENSPTRG00000008183	CNOT1	100	99.699	ENSCAFG00020010156	CNOT1	100	99.699	Canis_lupus_dingo
ENSPTRG00000008183	CNOT1	100	99.454	ENSCHIG00000010452	CNOT1	100	99.454	Capra_hircus
ENSPTRG00000008183	CNOT1	100	99.871	ENSTSYG00000006888	CNOT1	100	99.871	Carlito_syrichta
ENSPTRG00000008183	CNOT1	100	94.927	ENSCPOG00000013026	CNOT1	100	94.927	Cavia_porcellus
ENSPTRG00000008183	CNOT1	100	98.323	ENSCCAG00000026333	CNOT1	100	98.323	Cebus_capucinus
ENSPTRG00000008183	CNOT1	100	99.957	ENSCATG00000032625	CNOT1	100	99.957	Cercocebus_atys
ENSPTRG00000008183	CNOT1	100	99.371	ENSCLAG00000006289	CNOT1	100	99.371	Chinchilla_lanigera
ENSPTRG00000008183	CNOT1	100	99.664	ENSCSAG00000004731	CNOT1	100	99.664	Chlorocebus_sabaeus
ENSPTRG00000008183	CNOT1	80	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSPTRG00000008183	CNOT1	95	99.583	ENSCPBG00000026222	CNOT1	99	99.583	Chrysemys_picta_bellii
ENSPTRG00000008183	CNOT1	100	58.806	ENSCING00000009149	-	100	58.488	Ciona_intestinalis
ENSPTRG00000008183	CNOT1	89	62.768	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSPTRG00000008183	CNOT1	100	98.120	ENSCANG00000040534	CNOT1	100	98.120	Colobus_angolensis_palliatus
ENSPTRG00000008183	CNOT1	100	99.312	ENSCGRG00001016365	Cnot1	100	99.312	Cricetulus_griseus_chok1gshd
ENSPTRG00000008183	CNOT1	100	99.312	ENSCGRG00000001714	Cnot1	100	99.312	Cricetulus_griseus_crigri
ENSPTRG00000008183	CNOT1	100	82.869	ENSCVAG00000018930	cnot1	100	82.703	Cyprinodon_variegatus
ENSPTRG00000008183	CNOT1	100	89.678	ENSDARG00000004174	cnot1	100	89.553	Danio_rerio
ENSPTRG00000008183	CNOT1	100	96.896	ENSDNOG00000013250	CNOT1	100	96.896	Dasypus_novemcinctus
ENSPTRG00000008183	CNOT1	99	46.142	FBgn0085436	Not1	99	48.259	Drosophila_melanogaster
ENSPTRG00000008183	CNOT1	84	96.572	ENSETEG00000012806	CNOT1	84	96.572	Echinops_telfairi
ENSPTRG00000008183	CNOT1	81	82.372	ENSEBUG00000011534	cnot1	95	82.372	Eptatretus_burgeri
ENSPTRG00000008183	CNOT1	100	96.265	ENSEASG00005005819	CNOT1	100	98.805	Equus_asinus_asinus
ENSPTRG00000008183	CNOT1	100	99.496	ENSECAG00000009889	CNOT1	100	99.496	Equus_caballus
ENSPTRG00000008183	CNOT1	90	99.373	ENSEEUG00000006015	CNOT1	90	99.373	Erinaceus_europaeus
ENSPTRG00000008183	CNOT1	100	89.517	ENSELUG00000014085	cnot1	100	89.200	Esox_lucius
ENSPTRG00000008183	CNOT1	100	99.790	ENSFCAG00000025155	CNOT1	100	99.790	Felis_catus
ENSPTRG00000008183	CNOT1	100	97.398	ENSFALG00000007285	CNOT1	100	97.398	Ficedula_albicollis
ENSPTRG00000008183	CNOT1	100	99.570	ENSFDAG00000013399	CNOT1	100	99.570	Fukomys_damarensis
ENSPTRG00000008183	CNOT1	100	90.034	ENSFHEG00000020574	cnot1	100	90.075	Fundulus_heteroclitus
ENSPTRG00000008183	CNOT1	92	89.657	ENSGMOG00000012864	cnot1	100	90.028	Gadus_morhua
ENSPTRG00000008183	CNOT1	100	97.440	ENSGALG00000002301	CNOT1	100	97.440	Gallus_gallus
ENSPTRG00000008183	CNOT1	100	88.907	ENSGAFG00000015005	cnot1	100	88.907	Gambusia_affinis
ENSPTRG00000008183	CNOT1	92	90.496	ENSGACG00000002606	cnot1	100	94.946	Gasterosteus_aculeatus
ENSPTRG00000008183	CNOT1	100	97.609	ENSGAGG00000022646	CNOT1	100	97.609	Gopherus_agassizii
ENSPTRG00000008183	CNOT1	100	99.664	ENSGGOG00000009547	CNOT1	100	99.664	Gorilla_gorilla
ENSPTRG00000008183	CNOT1	97	96.111	ENSHBUG00000001729	cnot1	100	96.111	Haplochromis_burtoni
ENSPTRG00000008183	CNOT1	100	99.484	ENSHGLG00000014322	CNOT1	100	99.484	Heterocephalus_glaber_female
ENSPTRG00000008183	CNOT1	100	89.162	ENSHCOG00000006501	cnot1	100	89.301	Hippocampus_comes
ENSPTRG00000008183	CNOT1	100	88.666	ENSIPUG00000011915	cnot1	100	89.042	Ictalurus_punctatus
ENSPTRG00000008183	CNOT1	100	99.570	ENSSTOG00000005490	CNOT1	100	99.570	Ictidomys_tridecemlineatus
ENSPTRG00000008183	CNOT1	100	99.011	ENSJJAG00000000633	Cnot1	100	99.011	Jaculus_jaculus
ENSPTRG00000008183	CNOT1	100	90.075	ENSKMAG00000006149	cnot1	100	89.829	Kryptolebias_marmoratus
ENSPTRG00000008183	CNOT1	95	96.414	ENSLBEG00000004740	cnot1	100	96.414	Labrus_bergylta
ENSPTRG00000008183	CNOT1	100	94.796	ENSLACG00000010869	CNOT1	100	94.796	Latimeria_chalumnae
ENSPTRG00000008183	CNOT1	100	92.765	ENSLOCG00000006324	cnot1	100	92.765	Lepisosteus_oculatus
ENSPTRG00000008183	CNOT1	100	99.245	ENSLAFG00000000098	CNOT1	100	99.245	Loxodonta_africana
ENSPTRG00000008183	CNOT1	100	99.958	ENSMFAG00000035888	CNOT1	100	99.958	Macaca_fascicularis
ENSPTRG00000008183	CNOT1	100	99.914	ENSMMUG00000014625	CNOT1	100	99.914	Macaca_mulatta
ENSPTRG00000008183	CNOT1	100	97.440	ENSMNEG00000031820	CNOT1	100	99.628	Macaca_nemestrina
ENSPTRG00000008183	CNOT1	100	98.783	ENSMLEG00000040933	CNOT1	100	98.783	Mandrillus_leucophaeus
ENSPTRG00000008183	CNOT1	100	88.912	ENSMAMG00000016524	cnot1	100	88.949	Mastacembelus_armatus
ENSPTRG00000008183	CNOT1	97	96.111	ENSMZEG00005016210	cnot1	100	96.111	Maylandia_zebra
ENSPTRG00000008183	CNOT1	100	97.188	ENSMGAG00000001908	CNOT1	100	97.188	Meleagris_gallopavo
ENSPTRG00000008183	CNOT1	100	99.580	ENSMICG00000007071	CNOT1	100	99.580	Microcebus_murinus
ENSPTRG00000008183	CNOT1	100	99.355	ENSMOCG00000017969	Cnot1	100	99.355	Microtus_ochrogaster
ENSPTRG00000008183	CNOT1	97	92.778	ENSMMOG00000019134	cnot1	100	92.778	Mola_mola
ENSPTRG00000008183	CNOT1	100	97.609	ENSMODG00000014199	CNOT1	100	97.609	Monodelphis_domestica
ENSPTRG00000008183	CNOT1	100	89.992	ENSMALG00000008645	cnot1	100	89.992	Monopterus_albus
ENSPTRG00000008183	CNOT1	95	99.883	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.883	Mus_caroli
ENSPTRG00000008183	CNOT1	100	99.398	ENSMUSG00000036550	Cnot1	100	99.398	Mus_musculus
ENSPTRG00000008183	CNOT1	100	99.355	MGP_PahariEiJ_G0023028	Cnot1	100	99.355	Mus_pahari
ENSPTRG00000008183	CNOT1	100	99.398	MGP_SPRETEiJ_G0032549	Cnot1	100	99.398	Mus_spretus
ENSPTRG00000008183	CNOT1	100	99.496	ENSMPUG00000004830	CNOT1	100	99.496	Mustela_putorius_furo
ENSPTRG00000008183	CNOT1	100	98.825	ENSMLUG00000003728	CNOT1	100	98.825	Myotis_lucifugus
ENSPTRG00000008183	CNOT1	100	99.613	ENSNGAG00000018628	Cnot1	100	99.613	Nannospalax_galili
ENSPTRG00000008183	CNOT1	94	96.111	ENSNBRG00000019358	cnot1	100	96.111	Neolamprologus_brichardi
ENSPTRG00000008183	CNOT1	100	99.957	ENSNLEG00000003566	CNOT1	100	99.957	Nomascus_leucogenys
ENSPTRG00000008183	CNOT1	87	98.434	ENSMEUG00000006145	CNOT1	87	98.434	Notamacropus_eugenii
ENSPTRG00000008183	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSPTRG00000008183	CNOT1	100	99.527	ENSODEG00000016337	CNOT1	100	99.527	Octodon_degus
ENSPTRG00000008183	CNOT1	100	90.355	ENSONIG00000007358	cnot1	100	89.950	Oreochromis_niloticus
ENSPTRG00000008183	CNOT1	92	98.276	ENSOANG00000012109	CNOT1	100	98.032	Ornithorhynchus_anatinus
ENSPTRG00000008183	CNOT1	100	99.413	ENSOCUG00000006911	CNOT1	100	99.413	Oryctolagus_cuniculus
ENSPTRG00000008183	CNOT1	100	90.301	ENSORLG00000013734	cnot1	100	90.130	Oryzias_latipes
ENSPTRG00000008183	CNOT1	100	90.819	ENSORLG00020017012	cnot1	100	90.488	Oryzias_latipes_hni
ENSPTRG00000008183	CNOT1	100	90.734	ENSORLG00015007091	cnot1	100	90.231	Oryzias_latipes_hsok
ENSPTRG00000008183	CNOT1	100	90.056	ENSOMEG00000015124	cnot1	100	90.352	Oryzias_melastigma
ENSPTRG00000008183	CNOT1	100	99.329	ENSOGAG00000000543	CNOT1	100	99.329	Otolemur_garnettii
ENSPTRG00000008183	CNOT1	100	99.454	ENSOARG00000001567	CNOT1	100	99.454	Ovis_aries
ENSPTRG00000008183	CNOT1	100	100.000	ENSPPAG00000022013	CNOT1	100	100.000	Pan_paniscus
ENSPTRG00000008183	CNOT1	100	99.496	ENSPPRG00000004867	CNOT1	100	99.496	Panthera_pardus
ENSPTRG00000008183	CNOT1	100	99.496	ENSPTIG00000012589	CNOT1	100	99.496	Panthera_tigris_altaica
ENSPTRG00000008183	CNOT1	100	96.689	ENSPANG00000020901	CNOT1	100	96.689	Papio_anubis
ENSPTRG00000008183	CNOT1	97	92.350	ENSPKIG00000002914	CNOT1	99	92.350	Paramormyrops_kingsleyae
ENSPTRG00000008183	CNOT1	100	91.841	ENSPKIG00000023538	CNOT1	100	92.008	Paramormyrops_kingsleyae
ENSPTRG00000008183	CNOT1	100	97.482	ENSPSIG00000005499	CNOT1	100	97.482	Pelodiscus_sinensis
ENSPTRG00000008183	CNOT1	100	80.928	ENSPMAG00000009381	cnot1	100	80.829	Petromyzon_marinus
ENSPTRG00000008183	CNOT1	100	97.809	ENSPCIG00000007343	CNOT1	100	99.583	Phascolarctos_cinereus
ENSPTRG00000008183	CNOT1	99	89.901	ENSPFOG00000003497	cnot1	100	89.587	Poecilia_formosa
ENSPTRG00000008183	CNOT1	94	96.970	ENSPLAG00000014018	cnot1	100	96.970	Poecilia_latipinna
ENSPTRG00000008183	CNOT1	94	96.970	ENSPMEG00000005868	cnot1	100	96.970	Poecilia_mexicana
ENSPTRG00000008183	CNOT1	94	96.970	ENSPREG00000018793	cnot1	100	96.970	Poecilia_reticulata
ENSPTRG00000008183	CNOT1	100	99.664	ENSPPYG00000007410	CNOT1	100	99.664	Pongo_abelii
ENSPTRG00000008183	CNOT1	90	97.530	ENSPCAG00000003241	CNOT1	90	97.530	Procavia_capensis
ENSPTRG00000008183	CNOT1	100	99.622	ENSPCOG00000027139	CNOT1	100	99.622	Propithecus_coquereli
ENSPTRG00000008183	CNOT1	100	96.895	ENSPVAG00000004243	CNOT1	100	96.895	Pteropus_vampyrus
ENSPTRG00000008183	CNOT1	97	96.111	ENSPNYG00000012919	cnot1	100	96.111	Pundamilia_nyererei
ENSPTRG00000008183	CNOT1	100	89.723	ENSPNAG00000000246	cnot1	100	89.765	Pygocentrus_nattereri
ENSPTRG00000008183	CNOT1	100	99.035	ENSRNOG00000012271	Cnot1	100	99.035	Rattus_norvegicus
ENSPTRG00000008183	CNOT1	100	97.902	ENSRBIG00000044598	CNOT1	100	97.902	Rhinopithecus_bieti
ENSPTRG00000008183	CNOT1	100	99.957	ENSRROG00000000906	CNOT1	100	99.957	Rhinopithecus_roxellana
ENSPTRG00000008183	CNOT1	57	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSPTRG00000008183	CNOT1	100	95.772	ENSSBOG00000029155	CNOT1	100	95.772	Saimiri_boliviensis_boliviensis
ENSPTRG00000008183	CNOT1	100	97.862	ENSSHAG00000012187	CNOT1	100	97.862	Sarcophilus_harrisii
ENSPTRG00000008183	CNOT1	100	92.591	ENSSFOG00015017614	cnot1	100	92.331	Scleropages_formosus
ENSPTRG00000008183	CNOT1	97	96.111	ENSSMAG00000013844	cnot1	100	96.111	Scophthalmus_maximus
ENSPTRG00000008183	CNOT1	97	95.972	ENSSDUG00000021491	cnot1	100	95.972	Seriola_dumerili
ENSPTRG00000008183	CNOT1	97	95.972	ENSSLDG00000014816	cnot1	100	95.972	Seriola_lalandi_dorsalis
ENSPTRG00000008183	CNOT1	85	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSPTRG00000008183	CNOT1	100	90.377	ENSSPAG00000018802	cnot1	100	90.126	Stegastes_partitus
ENSPTRG00000008183	CNOT1	100	99.329	ENSSSCG00000002799	CNOT1	100	99.348	Sus_scrofa
ENSPTRG00000008183	CNOT1	100	97.276	ENSTGUG00000005919	CNOT1	100	97.276	Taeniopygia_guttata
ENSPTRG00000008183	CNOT1	100	88.810	ENSTNIG00000018706	cnot1	100	88.617	Tetraodon_nigroviridis
ENSPTRG00000008183	CNOT1	80	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
ENSPTRG00000008183	CNOT1	95	99.129	ENSTTRG00000008460	CNOT1	95	99.129	Tursiops_truncatus
ENSPTRG00000008183	CNOT1	100	99.496	ENSUAMG00000009251	CNOT1	100	99.496	Ursus_americanus
ENSPTRG00000008183	CNOT1	100	99.496	ENSUMAG00000021291	CNOT1	100	99.496	Ursus_maritimus
ENSPTRG00000008183	CNOT1	97	97.244	ENSVPAG00000008846	CNOT1	97	97.244	Vicugna_pacos
ENSPTRG00000008183	CNOT1	100	98.952	ENSVVUG00000024037	CNOT1	100	99.316	Vulpes_vulpes
ENSPTRG00000008183	CNOT1	100	89.916	ENSXETG00000015900	cnot1	100	89.707	Xenopus_tropicalis
ENSPTRG00000008183	CNOT1	100	89.075	ENSXCOG00000013552	cnot1	100	89.075	Xiphophorus_couchianus
ENSPTRG00000008183	CNOT1	100	89.117	ENSXMAG00000006031	cnot1	100	89.117	Xiphophorus_maculatus