EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000008308 (Gene tree)
Gene ID: 454216
Gene Symbol: SF3B3
Alias: -
Full Name: splicing factor 3b subunit 3
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 48869 bases
Position: chr16:61421944-61470812
Accession: 5918
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000014195	CPSF_A	PF03178.15	4.3e-102	1	1
ENSPTRP00000073999	CPSF_A	PF03178.15	1.3e-78	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000088805	-	957	-	ENSPTRP00000073999	318 (aa)	-	A0A2I3SAD6
ENSPTRT00000015329	-	4357	XM_016930108	ENSPTRP00000014195	1217 (aa)	XP_511081	H2QBG5

Gene Model

Click here to download ENSPTRG00000008308's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000008308's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000008308	SF3B3	100	100.000	ENSG00000189091	SF3B3	100	100.000	Homo_sapiens
ENSPTRG00000008308	SF3B3	96	93.510	ENSAPOG00000006172	sf3b3	98	93.510	Acanthochromis_polyacanthus
ENSPTRG00000008308	SF3B3	100	99.672	ENSAMEG00000002187	SF3B3	100	99.672	Ailuropoda_melanoleuca
ENSPTRG00000008308	SF3B3	92	90.625	ENSACIG00000016487	sf3b3	100	90.625	Amphilophus_citrinellus
ENSPTRG00000008308	SF3B3	100	93.426	ENSAOCG00000007158	sf3b3	100	93.426	Amphiprion_ocellaris
ENSPTRG00000008308	SF3B3	100	93.426	ENSAPEG00000022786	sf3b3	100	93.426	Amphiprion_percula
ENSPTRG00000008308	SF3B3	100	93.509	ENSATEG00000013708	sf3b3	100	93.509	Anabas_testudineus
ENSPTRG00000008308	SF3B3	81	98.176	ENSAPLG00000004996	SF3B3	100	98.176	Anas_platyrhynchos
ENSPTRG00000008308	SF3B3	100	98.603	ENSACAG00000001817	SF3B3	100	98.603	Anolis_carolinensis
ENSPTRG00000008308	SF3B3	100	100.000	ENSANAG00000028001	SF3B3	100	100.000	Aotus_nancymaae
ENSPTRG00000008308	SF3B3	96	93.168	ENSACLG00000022555	sf3b3	98	93.168	Astatotilapia_calliptera
ENSPTRG00000008308	SF3B3	100	93.180	ENSAMXG00000003410	sf3b3	100	93.180	Astyanax_mexicanus
ENSPTRG00000008308	SF3B3	100	100.000	ENSBTAG00000010627	SF3B3	100	100.000	Bos_taurus
ENSPTRG00000008308	SF3B3	100	60.618	WBGene00019323	teg-4	100	60.618	Caenorhabditis_elegans
ENSPTRG00000008308	SF3B3	100	100.000	ENSCJAG00000014773	SF3B3	99	100.000	Callithrix_jacchus
ENSPTRG00000008308	SF3B3	100	99.918	ENSCAFG00000020151	SF3B3	100	99.918	Canis_familiaris
ENSPTRG00000008308	SF3B3	100	99.918	ENSCAFG00020020912	SF3B3	100	99.918	Canis_lupus_dingo
ENSPTRG00000008308	SF3B3	100	99.918	ENSCHIG00000019822	SF3B3	100	99.918	Capra_hircus
ENSPTRG00000008308	SF3B3	100	100.000	ENSTSYG00000007910	SF3B3	100	100.000	Carlito_syrichta
ENSPTRG00000008308	SF3B3	99	84.713	ENSCAPG00000001484	SF3B3	92	89.016	Cavia_aperea
ENSPTRG00000008308	SF3B3	99	100.000	ENSCPOG00000000586	SF3B3	100	98.685	Cavia_porcellus
ENSPTRG00000008308	SF3B3	100	100.000	ENSCCAG00000017736	SF3B3	100	100.000	Cebus_capucinus
ENSPTRG00000008308	SF3B3	100	100.000	ENSCATG00000036562	SF3B3	100	100.000	Cercocebus_atys
ENSPTRG00000008308	SF3B3	100	100.000	ENSCLAG00000003921	SF3B3	100	100.000	Chinchilla_lanigera
ENSPTRG00000008308	SF3B3	100	99.918	ENSCSAG00000004371	SF3B3	100	99.918	Chlorocebus_sabaeus
ENSPTRG00000008308	SF3B3	99	94.904	ENSCHOG00000001878	SF3B3	90	92.835	Choloepus_hoffmanni
ENSPTRG00000008308	SF3B3	100	98.850	ENSCPBG00000015853	SF3B3	100	98.850	Chrysemys_picta_bellii
ENSPTRG00000008308	SF3B3	100	80.788	ENSCING00000001342	-	100	80.788	Ciona_intestinalis
ENSPTRG00000008308	SF3B3	99	79.475	ENSCSAVG00000011454	-	100	79.475	Ciona_savignyi
ENSPTRG00000008308	SF3B3	100	96.713	ENSCANG00000042920	SF3B3	100	96.713	Colobus_angolensis_palliatus
ENSPTRG00000008308	SF3B3	100	99.918	ENSCGRG00001015908	Sf3b3	100	99.918	Cricetulus_griseus_chok1gshd
ENSPTRG00000008308	SF3B3	100	99.918	ENSCGRG00000010180	Sf3b3	100	99.918	Cricetulus_griseus_crigri
ENSPTRG00000008308	SF3B3	82	92.515	ENSCSEG00000014192	sf3b3	99	92.515	Cynoglossus_semilaevis
ENSPTRG00000008308	SF3B3	100	92.605	ENSCVAG00000010459	sf3b3	100	92.605	Cyprinodon_variegatus
ENSPTRG00000008308	SF3B3	100	93.426	ENSDARG00000103553	sf3b3	100	93.426	Danio_rerio
ENSPTRG00000008308	SF3B3	99	100.000	ENSDNOG00000043626	SF3B3	100	100.000	Dasypus_novemcinctus
ENSPTRG00000008308	SF3B3	100	100.000	ENSDORG00000014176	Sf3b3	100	100.000	Dipodomys_ordii
ENSPTRG00000008308	SF3B3	100	75.143	FBgn0035162	Sf3b3	100	75.143	Drosophila_melanogaster
ENSPTRG00000008308	SF3B3	84	100.000	ENSETEG00000002729	SF3B3	84	100.000	Echinops_telfairi
ENSPTRG00000008308	SF3B3	100	87.757	ENSEBUG00000006117	sf3b3	100	87.757	Eptatretus_burgeri
ENSPTRG00000008308	SF3B3	100	99.918	ENSEASG00005013376	SF3B3	100	99.918	Equus_asinus_asinus
ENSPTRG00000008308	SF3B3	100	99.918	ENSECAG00000014053	SF3B3	100	99.918	Equus_caballus
ENSPTRG00000008308	SF3B3	99	99.363	ENSEEUG00000015611	SF3B3	93	99.643	Erinaceus_europaeus
ENSPTRG00000008308	SF3B3	100	91.393	ENSELUG00000015417	sf3b3	100	91.393	Esox_lucius
ENSPTRG00000008308	SF3B3	100	99.918	ENSFCAG00000009487	SF3B3	100	99.918	Felis_catus
ENSPTRG00000008308	SF3B3	100	98.932	ENSFALG00000007372	SF3B3	100	98.932	Ficedula_albicollis
ENSPTRG00000008308	SF3B3	100	99.918	ENSFDAG00000002608	SF3B3	100	99.918	Fukomys_damarensis
ENSPTRG00000008308	SF3B3	100	93.016	ENSFHEG00000017824	sf3b3	100	93.016	Fundulus_heteroclitus
ENSPTRG00000008308	SF3B3	100	89.409	ENSGMOG00000008139	sf3b3	100	89.409	Gadus_morhua
ENSPTRG00000008308	SF3B3	100	99.178	ENSGALG00000002531	SF3B3	100	99.178	Gallus_gallus
ENSPTRG00000008308	SF3B3	100	92.605	ENSGAFG00000015206	sf3b3	100	92.605	Gambusia_affinis
ENSPTRG00000008308	SF3B3	100	93.021	ENSGACG00000002646	sf3b3	100	93.021	Gasterosteus_aculeatus
ENSPTRG00000008308	SF3B3	99	97.452	ENSGAGG00000006746	SF3B3	97	98.890	Gopherus_agassizii
ENSPTRG00000008308	SF3B3	100	100.000	ENSGGOG00000003246	SF3B3	100	100.000	Gorilla_gorilla
ENSPTRG00000008308	SF3B3	92	85.714	ENSHBUG00000005960	sf3b3	100	86.875	Haplochromis_burtoni
ENSPTRG00000008308	SF3B3	100	100.000	ENSHGLG00000010135	SF3B3	100	100.000	Heterocephalus_glaber_female
ENSPTRG00000008308	SF3B3	99	100.000	ENSHGLG00100011148	SF3B3	100	97.810	Heterocephalus_glaber_male
ENSPTRG00000008308	SF3B3	100	92.687	ENSHCOG00000011981	sf3b3	100	92.687	Hippocampus_comes
ENSPTRG00000008308	SF3B3	100	93.098	ENSIPUG00000020435	sf3b3	100	93.098	Ictalurus_punctatus
ENSPTRG00000008308	SF3B3	100	100.000	ENSSTOG00000007065	SF3B3	100	100.000	Ictidomys_tridecemlineatus
ENSPTRG00000008308	SF3B3	100	100.000	ENSJJAG00000003948	Sf3b3	100	100.000	Jaculus_jaculus
ENSPTRG00000008308	SF3B3	100	90.797	ENSKMAG00000004066	sf3b3	99	92.997	Kryptolebias_marmoratus
ENSPTRG00000008308	SF3B3	100	92.933	ENSLBEG00000018302	sf3b3	100	92.933	Labrus_bergylta
ENSPTRG00000008308	SF3B3	99	91.401	ENSLACG00000012501	SF3B3	99	92.276	Latimeria_chalumnae
ENSPTRG00000008308	SF3B3	100	94.089	ENSLOCG00000007566	sf3b3	100	94.089	Lepisosteus_oculatus
ENSPTRG00000008308	SF3B3	100	99.918	ENSLAFG00000012219	SF3B3	100	99.918	Loxodonta_africana
ENSPTRG00000008308	SF3B3	100	100.000	ENSMFAG00000045487	SF3B3	100	100.000	Macaca_fascicularis
ENSPTRG00000008308	SF3B3	100	100.000	ENSMMUG00000017812	SF3B3	100	100.000	Macaca_mulatta
ENSPTRG00000008308	SF3B3	100	100.000	ENSMNEG00000033385	SF3B3	100	100.000	Macaca_nemestrina
ENSPTRG00000008308	SF3B3	99	100.000	ENSMLEG00000043891	SF3B3	98	99.369	Mandrillus_leucophaeus
ENSPTRG00000008308	SF3B3	100	93.509	ENSMAMG00000016837	sf3b3	100	93.509	Mastacembelus_armatus
ENSPTRG00000008308	SF3B3	89	90.194	ENSMZEG00005026015	sf3b3	99	90.194	Maylandia_zebra
ENSPTRG00000008308	SF3B3	100	93.098	ENSMZEG00005010836	sf3b3	100	93.098	Maylandia_zebra
ENSPTRG00000008308	SF3B3	100	99.178	ENSMGAG00000001597	SF3B3	100	99.178	Meleagris_gallopavo
ENSPTRG00000008308	SF3B3	81	83.069	ENSMAUG00000013618	Sf3b3	95	83.069	Mesocricetus_auratus
ENSPTRG00000008308	SF3B3	100	98.852	ENSMICG00000001363	SF3B3	100	98.852	Microcebus_murinus
ENSPTRG00000008308	SF3B3	100	99.918	ENSMOCG00000006108	Sf3b3	100	99.918	Microtus_ochrogaster
ENSPTRG00000008308	SF3B3	89	90.564	ENSMMOG00000002598	sf3b3	97	90.564	Mola_mola
ENSPTRG00000008308	SF3B3	99	99.045	ENSMODG00000014363	SF3B3	100	95.320	Monodelphis_domestica
ENSPTRG00000008308	SF3B3	100	93.180	ENSMALG00000008014	sf3b3	100	93.180	Monopterus_albus
ENSPTRG00000008308	SF3B3	100	99.836	MGP_CAROLIEiJ_G0031563	Sf3b3	100	99.836	Mus_caroli
ENSPTRG00000008308	SF3B3	100	99.918	ENSMUSG00000033732	Sf3b3	100	99.918	Mus_musculus
ENSPTRG00000008308	SF3B3	100	99.836	MGP_SPRETEiJ_G0032681	Sf3b3	100	99.836	Mus_spretus
ENSPTRG00000008308	SF3B3	100	99.918	ENSMPUG00000010277	SF3B3	100	99.918	Mustela_putorius_furo
ENSPTRG00000008308	SF3B3	100	99.836	ENSMLUG00000014607	SF3B3	100	99.836	Myotis_lucifugus
ENSPTRG00000008308	SF3B3	100	100.000	ENSNGAG00000021903	Sf3b3	100	100.000	Nannospalax_galili
ENSPTRG00000008308	SF3B3	83	97.222	ENSNBRG00000007197	sf3b3	99	97.222	Neolamprologus_brichardi
ENSPTRG00000008308	SF3B3	100	99.686	ENSNLEG00000016127	SF3B3	100	99.686	Nomascus_leucogenys
ENSPTRG00000008308	SF3B3	94	98.993	ENSMEUG00000004479	SF3B3	94	98.945	Notamacropus_eugenii
ENSPTRG00000008308	SF3B3	99	99.682	ENSOPRG00000009847	SF3B3	100	96.731	Ochotona_princeps
ENSPTRG00000008308	SF3B3	100	99.918	ENSODEG00000014154	SF3B3	100	99.918	Octodon_degus
ENSPTRG00000008308	SF3B3	100	93.344	ENSONIG00000011198	sf3b3	100	93.344	Oreochromis_niloticus
ENSPTRG00000008308	SF3B3	100	99.671	ENSOANG00000001161	-	100	99.671	Ornithorhynchus_anatinus
ENSPTRG00000008308	SF3B3	99	100.000	ENSOCUG00000004139	SF3B3	100	97.617	Oryctolagus_cuniculus
ENSPTRG00000008308	SF3B3	100	93.180	ENSORLG00000013472	sf3b3	100	93.180	Oryzias_latipes
ENSPTRG00000008308	SF3B3	100	93.180	ENSORLG00020017473	sf3b3	100	93.180	Oryzias_latipes_hni
ENSPTRG00000008308	SF3B3	100	93.180	ENSORLG00015007710	sf3b3	100	93.180	Oryzias_latipes_hsok
ENSPTRG00000008308	SF3B3	100	92.851	ENSOMEG00000014483	sf3b3	100	92.851	Oryzias_melastigma
ENSPTRG00000008308	SF3B3	100	99.590	ENSOGAG00000016051	SF3B3	100	99.590	Otolemur_garnettii
ENSPTRG00000008308	SF3B3	100	99.672	ENSOARG00000004816	SF3B3	100	99.672	Ovis_aries
ENSPTRG00000008308	SF3B3	100	100.000	ENSPPAG00000026807	SF3B3	100	100.000	Pan_paniscus
ENSPTRG00000008308	SF3B3	100	99.918	ENSPPRG00000001686	SF3B3	100	99.918	Panthera_pardus
ENSPTRG00000008308	SF3B3	99	89.172	ENSPTIG00000020382	SF3B3	100	96.872	Panthera_tigris_altaica
ENSPTRG00000008308	SF3B3	100	100.000	ENSPANG00000024075	SF3B3	100	100.000	Papio_anubis
ENSPTRG00000008308	SF3B3	100	92.769	ENSPKIG00000002712	sf3b3	100	92.769	Paramormyrops_kingsleyae
ENSPTRG00000008308	SF3B3	99	97.771	ENSPSIG00000002232	SF3B3	100	98.988	Pelodiscus_sinensis
ENSPTRG00000008308	SF3B3	99	85.669	ENSPMGG00000016960	sf3b3	100	88.668	Periophthalmus_magnuspinnatus
ENSPTRG00000008308	SF3B3	100	99.918	ENSPEMG00000008603	Sf3b3	100	99.918	Peromyscus_maniculatus_bairdii
ENSPTRG00000008308	SF3B3	100	91.865	ENSPMAG00000001793	sf3b3	100	91.865	Petromyzon_marinus
ENSPTRG00000008308	SF3B3	100	99.671	ENSPCIG00000014927	SF3B3	100	99.671	Phascolarctos_cinereus
ENSPTRG00000008308	SF3B3	100	92.687	ENSPFOG00000015516	sf3b3	100	92.687	Poecilia_formosa
ENSPTRG00000008308	SF3B3	100	92.687	ENSPLAG00000014330	sf3b3	100	92.687	Poecilia_latipinna
ENSPTRG00000008308	SF3B3	100	92.769	ENSPMEG00000019856	sf3b3	100	92.769	Poecilia_mexicana
ENSPTRG00000008308	SF3B3	81	93.598	ENSPREG00000019669	sf3b3	97	93.598	Poecilia_reticulata
ENSPTRG00000008308	SF3B3	99	99.682	ENSPPYG00000007539	SF3B3	100	99.903	Pongo_abelii
ENSPTRG00000008308	SF3B3	99	89.172	ENSPCAG00000002623	SF3B3	100	78.225	Procavia_capensis
ENSPTRG00000008308	SF3B3	99	99.682	ENSPCOG00000026582	SF3B3	100	100.000	Propithecus_coquereli
ENSPTRG00000008308	SF3B3	100	99.836	ENSPVAG00000000684	SF3B3	100	99.836	Pteropus_vampyrus
ENSPTRG00000008308	SF3B3	100	93.180	ENSPNYG00000003528	sf3b3	100	93.180	Pundamilia_nyererei
ENSPTRG00000008308	SF3B3	100	93.509	ENSPNAG00000015419	sf3b3	100	93.509	Pygocentrus_nattereri
ENSPTRG00000008308	SF3B3	100	99.918	ENSRNOG00000017724	Sf3b3	100	99.918	Rattus_norvegicus
ENSPTRG00000008308	SF3B3	100	100.000	ENSRBIG00000021904	SF3B3	100	100.000	Rhinopithecus_bieti
ENSPTRG00000008308	SF3B3	100	100.000	ENSRROG00000045703	SF3B3	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000008308	SF3B3	100	100.000	ENSSBOG00000029156	SF3B3	100	100.000	Saimiri_boliviensis_boliviensis
ENSPTRG00000008308	SF3B3	100	99.671	ENSSHAG00000000372	SF3B3	100	99.671	Sarcophilus_harrisii
ENSPTRG00000008308	SF3B3	100	93.755	ENSSFOG00015012877	sf3b3	100	93.755	Scleropages_formosus
ENSPTRG00000008308	SF3B3	100	92.851	ENSSMAG00000014386	sf3b3	100	92.851	Scophthalmus_maximus
ENSPTRG00000008308	SF3B3	100	93.591	ENSSDUG00000021201	sf3b3	100	93.591	Seriola_dumerili
ENSPTRG00000008308	SF3B3	100	93.509	ENSSLDG00000017532	sf3b3	100	93.509	Seriola_lalandi_dorsalis
ENSPTRG00000008308	SF3B3	93	100.000	ENSSARG00000006917	SF3B3	93	100.000	Sorex_araneus
ENSPTRG00000008308	SF3B3	100	98.932	ENSSPUG00000006253	SF3B3	100	98.932	Sphenodon_punctatus
ENSPTRG00000008308	SF3B3	100	85.703	ENSSPAG00000003125	sf3b3	100	85.703	Stegastes_partitus
ENSPTRG00000008308	SF3B3	100	99.918	ENSSSCG00000025323	SF3B3	100	99.918	Sus_scrofa
ENSPTRG00000008308	SF3B3	100	99.097	ENSTGUG00000006082	SF3B3	100	99.097	Taeniopygia_guttata
ENSPTRG00000008308	SF3B3	63	94.828	ENSTRUG00000016719	-	97	84.615	Takifugu_rubripes
ENSPTRG00000008308	SF3B3	72	64.255	ENSTRUG00000015623	sf3b3	88	83.642	Takifugu_rubripes
ENSPTRG00000008308	SF3B3	89	93.107	ENSTNIG00000004857	sf3b3	100	93.107	Tetraodon_nigroviridis
ENSPTRG00000008308	SF3B3	99	95.860	ENSTBEG00000002946	SF3B3	100	84.771	Tupaia_belangeri
ENSPTRG00000008308	SF3B3	100	99.096	ENSTTRG00000005855	SF3B3	100	99.096	Tursiops_truncatus
ENSPTRG00000008308	SF3B3	100	99.918	ENSUAMG00000006780	SF3B3	100	99.918	Ursus_americanus
ENSPTRG00000008308	SF3B3	100	99.918	ENSUMAG00000017757	SF3B3	100	99.918	Ursus_maritimus
ENSPTRG00000008308	SF3B3	99	90.764	ENSVPAG00000003202	SF3B3	100	83.730	Vicugna_pacos
ENSPTRG00000008308	SF3B3	100	99.836	ENSVVUG00000017922	SF3B3	100	99.836	Vulpes_vulpes
ENSPTRG00000008308	SF3B3	100	96.713	ENSXETG00000032869	SF3B3	100	96.713	Xenopus_tropicalis
ENSPTRG00000008308	SF3B3	77	94.161	ENSXCOG00000013628	sf3b3	97	94.161	Xiphophorus_couchianus
ENSPTRG00000008308	SF3B3	100	92.687	ENSXMAG00000006334	sf3b3	99	93.801	Xiphophorus_maculatus