EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPTRG00000008539 (Gene tree)
Gene ID
454414
Gene Symbol
RPA1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Pan_troglodytes
Status
putative
Strand
Plus strand
Length
70926 bases
Position
chr17:1829771-1900696
Accession
9570
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTRP00000014573tRNA_anti-codonPF01336.256.6e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTRT00000015751-2872XM_016931159ENSPTRP00000014573616 (aa)XP_016786648H2QBU7
Gene Model
Click here to download ENSPTRG00000008539's gene model file
Pathways
Pathway IDPathway NameSource
ptr03030DNA replicationKEGG
ptr03420Nucleotide excision repairKEGG
ptr03430Mismatch repairKEGG
ptr03440Homologous recombinationKEGG
ptr03460Fanconi anemia pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000008539's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTRG00000008539RPA19963.458ENSAPOG00000011658rpa19963.458Acanthochromis_polyacanthus
ENSPTRG00000008539RPA19063.532ENSAPOG00000019409RPA18063.532Acanthochromis_polyacanthus
ENSPTRG00000008539RPA19988.342ENSAMEG00000007706RPA19888.342Ailuropoda_melanoleuca
ENSPTRG00000008539RPA19558.744ENSACIG00000012881RPA19958.744Amphilophus_citrinellus
ENSPTRG00000008539RPA19558.136ENSACIG00000007277rpa19958.206Amphilophus_citrinellus
ENSPTRG00000008539RPA19954.839ENSAOCG00000009003RPA19954.992Amphiprion_ocellaris
ENSPTRG00000008539RPA19963.518ENSAOCG00000023376rpa19963.448Amphiprion_ocellaris
ENSPTRG00000008539RPA19963.355ENSAPEG00000008634rpa19963.276Amphiprion_percula
ENSPTRG00000008539RPA19953.754ENSAPEG00000019132RPA18464.172Amphiprion_percula
ENSPTRG00000008539RPA19954.824ENSATEG00000006443RPA19953.905Anabas_testudineus
ENSPTRG00000008539RPA19464.433ENSATEG00000022024rpa19964.261Anabas_testudineus
ENSPTRG00000008539RPA19864.749ENSAPLG00000012442RPA110064.749Anas_platyrhynchos
ENSPTRG00000008539RPA19963.328ENSACAG00000014490RPA19963.446Anolis_carolinensis
ENSPTRG00000008539RPA19894.868ENSANAG00000023456RPA110094.362Aotus_nancymaae
ENSPTRG00000008539RPA19364.286ENSACLG00000006640rpa19963.937Astatotilapia_calliptera
ENSPTRG00000008539RPA19957.367ENSACLG00000005223RPA19957.367Astatotilapia_calliptera
ENSPTRG00000008539RPA19961.726ENSAMXG00000008418rpa19962.602Astyanax_mexicanus
ENSPTRG00000008539RPA110089.773ENSBTAG00000009711RPA110089.773Bos_taurus
ENSPTRG00000008539RPA17830.675WBGene00017546rpa-17130.867Caenorhabditis_elegans
ENSPTRG00000008539RPA110093.831ENSCJAG00000001848RPA110093.831Callithrix_jacchus
ENSPTRG00000008539RPA110088.655ENSCAFG00000019249RPA110088.149Canis_familiaris
ENSPTRG00000008539RPA110088.655ENSCAFG00020009847RPA110088.149Canis_lupus_dingo
ENSPTRG00000008539RPA110090.422ENSCHIG00000026308RPA110090.422Capra_hircus
ENSPTRG00000008539RPA110092.058ENSTSYG00000003482-10091.248Carlito_syrichta
ENSPTRG00000008539RPA110088.636ENSCPOG00000000035RPA110088.636Cavia_porcellus
ENSPTRG00000008539RPA110083.468ENSCCAG00000010981RPA110083.468Cebus_capucinus
ENSPTRG00000008539RPA19990.081ENSCLAG00000005185-9989.577Chinchilla_lanigera
ENSPTRG00000008539RPA110084.903ENSCLAG00000015045-10084.903Chinchilla_lanigera
ENSPTRG00000008539RPA110085.089ENSCSAG00000013833RPA110085.089Chlorocebus_sabaeus
ENSPTRG00000008539RPA19586.565ENSCHOG00000013540-10086.565Choloepus_hoffmanni
ENSPTRG00000008539RPA17192.255ENSCHOG00000009454-10092.255Choloepus_hoffmanni
ENSPTRG00000008539RPA19976.911ENSCPBG00000020377RPA19976.667Chrysemys_picta_bellii
ENSPTRG00000008539RPA19942.557ENSCING00000023482-9842.553Ciona_intestinalis
ENSPTRG00000008539RPA19891.901ENSCANG00000030911RPA110091.901Colobus_angolensis_palliatus
ENSPTRG00000008539RPA19987.561ENSCGRG00001008197Rpa19987.217Cricetulus_griseus_chok1gshd
ENSPTRG00000008539RPA18186.417ENSCGRG00000000582Rpa19985.996Cricetulus_griseus_crigri
ENSPTRG00000008539RPA19961.111ENSCSEG00000013066rpa19960.948Cynoglossus_semilaevis
ENSPTRG00000008539RPA19952.866ENSCSEG00000012726RPA19852.811Cynoglossus_semilaevis
ENSPTRG00000008539RPA19653.005ENSCVAG00000013446-9653.005Cyprinodon_variegatus
ENSPTRG00000008539RPA19964.052ENSCVAG00000019431rpa19964.965Cyprinodon_variegatus
ENSPTRG00000008539RPA19963.577ENSDARG00000003938rpa19963.577Danio_rerio
ENSPTRG00000008539RPA19988.962ENSDNOG00000017218RPA19988.962Dasypus_novemcinctus
ENSPTRG00000008539RPA110089.610ENSDORG00000006199Rpa110089.610Dipodomys_ordii
ENSPTRG00000008539RPA19941.680FBgn0010173RpA-709842.003Drosophila_melanogaster
ENSPTRG00000008539RPA18382.367ENSETEG00000017608RPA18282.367Echinops_telfairi
ENSPTRG00000008539RPA19890.381ENSEASG00005009372RPA110087.884Equus_asinus_asinus
ENSPTRG00000008539RPA110090.600ENSECAG00000023886RPA110090.097Equus_caballus
ENSPTRG00000008539RPA16890.000ENSEEUG00000002186-6890.000Erinaceus_europaeus
ENSPTRG00000008539RPA18856.722ENSELUG00000006136RPA19956.722Esox_lucius
ENSPTRG00000008539RPA19962.197ENSELUG00000021071rpa19962.036Esox_lucius
ENSPTRG00000008539RPA110087.702ENSFCAG00000006306RPA19987.034Felis_catus
ENSPTRG00000008539RPA110074.313ENSFALG00000006575RPA19973.990Ficedula_albicollis
ENSPTRG00000008539RPA19989.902ENSFDAG00000007720RPA19989.902Fukomys_damarensis
ENSPTRG00000008539RPA19962.336ENSFHEG00000003580rpa19962.131Fundulus_heteroclitus
ENSPTRG00000008539RPA19959.150ENSGMOG00000010382rpa19959.150Gadus_morhua
ENSPTRG00000008539RPA110074.392ENSGALG00000003072RPA19974.230Gallus_gallus
ENSPTRG00000008539RPA19963.427ENSGAFG00000012916rpa19963.399Gambusia_affinis
ENSPTRG00000008539RPA19954.834ENSGAFG00000020953RPA19955.167Gambusia_affinis
ENSPTRG00000008539RPA19961.401ENSGACG00000010856rpa19960.912Gasterosteus_aculeatus
ENSPTRG00000008539RPA19976.911ENSGAGG00000013611RPA19976.098Gopherus_agassizii
ENSPTRG00000008539RPA110094.481ENSGGOG00000014186RPA110094.481Gorilla_gorilla
ENSPTRG00000008539RPA19963.458ENSHBUG00000017773rpa19963.518Haplochromis_burtoni
ENSPTRG00000008539RPA19654.027ENSHBUG00000009348RPA19953.859Haplochromis_burtoni
ENSPTRG00000008539RPA19989.577ENSHGLG00000008846RPA110089.577Heterocephalus_glaber_female
ENSPTRG00000008539RPA19989.577ENSHGLG00100017755-10089.577Heterocephalus_glaber_male
ENSPTRG00000008539RPA110076.461ENSHGLG00100002005-10076.461Heterocephalus_glaber_male
ENSPTRG00000008539RPA110084.903ENSHGLG00100000799-10084.903Heterocephalus_glaber_male
ENSPTRG00000008539RPA19944.318ENSHCOG00000000351RPA19944.265Hippocampus_comes
ENSPTRG00000008539RPA19961.912ENSHCOG00000001401rpa19961.726Hippocampus_comes
ENSPTRG00000008539RPA19962.825ENSIPUG00000004400rpa19962.662Ictalurus_punctatus
ENSPTRG00000008539RPA19882.730ENSSTOG00000022475RPA19882.730Ictidomys_tridecemlineatus
ENSPTRG00000008539RPA19590.323ENSJJAG00000000876Rpa19889.626Jaculus_jaculus
ENSPTRG00000008539RPA19955.395ENSKMAG00000000234RPA19955.484Kryptolebias_marmoratus
ENSPTRG00000008539RPA19962.969ENSKMAG00000005605rpa19962.969Kryptolebias_marmoratus
ENSPTRG00000008539RPA19962.480ENSLBEG00000021604rpa19962.378Labrus_bergylta
ENSPTRG00000008539RPA19863.326ENSLBEG00000002281RPA18063.326Labrus_bergylta
ENSPTRG00000008539RPA18067.677ENSLACG00000007210RPA19668.842Latimeria_chalumnae
ENSPTRG00000008539RPA19968.078ENSLOCG00000006397rpa19967.590Lepisosteus_oculatus
ENSPTRG00000008539RPA19987.762ENSLAFG00000015354RPA19987.097Loxodonta_africana
ENSPTRG00000008539RPA18296.245ENSMFAG00000036138-10096.245Macaca_fascicularis
ENSPTRG00000008539RPA19896.860ENSMMUG00000011604-10096.860Macaca_mulatta
ENSPTRG00000008539RPA110088.961ENSMMUG00000002442-10088.961Macaca_mulatta
ENSPTRG00000008539RPA110094.156ENSMNEG00000031632-10094.156Macaca_nemestrina
ENSPTRG00000008539RPA18991.755ENSMNEG00000029837-10091.755Macaca_nemestrina
ENSPTRG00000008539RPA19890.774ENSMLEG00000038768-10090.774Mandrillus_leucophaeus
ENSPTRG00000008539RPA19963.948ENSMAMG00000017993rpa19963.844Mastacembelus_armatus
ENSPTRG00000008539RPA19953.116ENSMAMG00000020097RPA19162.277Mastacembelus_armatus
ENSPTRG00000008539RPA19963.458ENSMZEG00005007551rpa19963.518Maylandia_zebra
ENSPTRG00000008539RPA19957.367ENSMZEG00005024731RPA19957.367Maylandia_zebra
ENSPTRG00000008539RPA19973.934ENSMGAG00000005315RPA19873.770Meleagris_gallopavo
ENSPTRG00000008539RPA19788.500ENSMAUG00000010474Rpa19988.500Mesocricetus_auratus
ENSPTRG00000008539RPA110090.762ENSMICG00000012867RPA110090.260Microcebus_murinus
ENSPTRG00000008539RPA19987.622ENSMOCG00000013019Rpa19987.113Microtus_ochrogaster
ENSPTRG00000008539RPA19961.538ENSMMOG00000014292rpa19962.775Mola_mola
ENSPTRG00000008539RPA19756.260ENSMMOG00000010868RPA19756.260Mola_mola
ENSPTRG00000008539RPA19983.740ENSMODG00000010549RPA19983.225Monodelphis_domestica
ENSPTRG00000008539RPA19462.329ENSMALG00000001208RPA17762.329Monopterus_albus
ENSPTRG00000008539RPA19964.426ENSMALG00000011453rpa19964.157Monopterus_albus
ENSPTRG00000008539RPA19986.548MGP_CAROLIEiJ_G0016734Rpa19985.877Mus_caroli
ENSPTRG00000008539RPA19984.430ENSMUSG00000000751Rpa19983.762Mus_musculus
ENSPTRG00000008539RPA19987.419MGP_PahariEiJ_G0017871Rpa19986.914Mus_pahari
ENSPTRG00000008539RPA19984.455MGP_SPRETEiJ_G0017577Rpa19983.788Mus_spretus
ENSPTRG00000008539RPA110087.662ENSMPUG00000013119RPA110087.662Mustela_putorius_furo
ENSPTRG00000008539RPA110086.013ENSMLUG00000006113RPA110085.507Myotis_lucifugus
ENSPTRG00000008539RPA19985.597ENSNGAG00000004522Rpa19785.597Nannospalax_galili
ENSPTRG00000008539RPA19464.076ENSNBRG00000020595rpa19963.731Neolamprologus_brichardi
ENSPTRG00000008539RPA19756.667ENSNBRG00000009672RPA19655.593Neolamprologus_brichardi
ENSPTRG00000008539RPA110098.052ENSNLEG00000017149RPA110098.052Nomascus_leucogenys
ENSPTRG00000008539RPA19872.591ENSMEUG00000006714RPA19972.591Notamacropus_eugenii
ENSPTRG00000008539RPA19587.793ENSODEG00000009038RPA19687.437Octodon_degus
ENSPTRG00000008539RPA19963.651ENSONIG00000013135rpa19963.666Oreochromis_niloticus
ENSPTRG00000008539RPA19882.255ENSOANG00000010880RPA19981.728Ornithorhynchus_anatinus
ENSPTRG00000008539RPA110085.449ENSOCUG00000001504RPA110085.449Oryctolagus_cuniculus
ENSPTRG00000008539RPA19963.948ENSORLG00000004856rpa19963.252Oryzias_latipes
ENSPTRG00000008539RPA19953.963ENSORLG00000003368RPA18464.155Oryzias_latipes
ENSPTRG00000008539RPA19963.562ENSORLG00020008980rpa19963.415Oryzias_latipes_hni
ENSPTRG00000008539RPA19951.579ENSORLG00020015284RPA18363.470Oryzias_latipes_hni
ENSPTRG00000008539RPA19963.562ENSORLG00015013982rpa19963.415Oryzias_latipes_hsok
ENSPTRG00000008539RPA19954.193ENSORLG00015020383RPA19953.738Oryzias_latipes_hsok
ENSPTRG00000008539RPA16662.808ENSORLG00015005867-9760.748Oryzias_latipes_hsok
ENSPTRG00000008539RPA19654.992ENSOMEG00000011040RPA19956.186Oryzias_melastigma
ENSPTRG00000008539RPA19961.889ENSOMEG00000004704rpa19961.426Oryzias_melastigma
ENSPTRG00000008539RPA19487.413ENSOGAG00000029379-10085.965Otolemur_garnettii
ENSPTRG00000008539RPA110090.113ENSOGAG00000005581-10089.448Otolemur_garnettii
ENSPTRG00000008539RPA110090.260ENSOARG00000014479RPA110090.260Ovis_aries
ENSPTRG00000008539RPA110099.513ENSPPAG00000039680RPA110099.513Pan_paniscus
ENSPTRG00000008539RPA110087.379ENSPPRG00000011807RPA19986.710Panthera_pardus
ENSPTRG00000008539RPA110087.217ENSPTIG00000007898RPA19986.548Panthera_tigris_altaica
ENSPTRG00000008539RPA110097.078ENSPANG00000024592RPA110097.078Papio_anubis
ENSPTRG00000008539RPA19462.779ENSPKIG00000008053rpa19462.779Paramormyrops_kingsleyae
ENSPTRG00000008539RPA19776.167ENSPSIG00000015617RPA19975.833Pelodiscus_sinensis
ENSPTRG00000008539RPA19954.369ENSPMGG00000000543RPA19955.614Periophthalmus_magnuspinnatus
ENSPTRG00000008539RPA19961.011ENSPMGG00000011589rpa19961.011Periophthalmus_magnuspinnatus
ENSPTRG00000008539RPA19988.599ENSPEMG00000021061Rpa19987.928Peromyscus_maniculatus_bairdii
ENSPTRG00000008539RPA19982.439ENSPCIG00000019049RPA19982.276Phascolarctos_cinereus
ENSPTRG00000008539RPA19964.052ENSPFOG00000003987rpa19963.622Poecilia_formosa
ENSPTRG00000008539RPA19454.750ENSPLAG00000008844-9754.750Poecilia_latipinna
ENSPTRG00000008539RPA19963.770ENSPLAG00000004984rpa19963.666Poecilia_latipinna
ENSPTRG00000008539RPA19455.395ENSPMEG00000003627-9755.233Poecilia_mexicana
ENSPTRG00000008539RPA19964.052ENSPMEG00000020602rpa19964.198Poecilia_mexicana
ENSPTRG00000008539RPA19952.733ENSPREG00000010119RPA110052.477Poecilia_reticulata
ENSPTRG00000008539RPA19456.164ENSPREG00000010174rpa19655.897Poecilia_reticulata
ENSPTRG00000008539RPA110091.086ENSPCOG00000001799RPA110090.584Propithecus_coquereli
ENSPTRG00000008539RPA110089.303ENSPVAG00000002149RPA110088.799Pteropus_vampyrus
ENSPTRG00000008539RPA19963.622ENSPNYG00000016316rpa19963.889Pundamilia_nyererei
ENSPTRG00000008539RPA19957.053ENSPNYG00000024165RPA19957.053Pundamilia_nyererei
ENSPTRG00000008539RPA19855.814ENSPNAG00000008599rpa19954.180Pygocentrus_nattereri
ENSPTRG00000008539RPA19987.602ENSRNOG00000003123Rpa19987.602Rattus_norvegicus
ENSPTRG00000008539RPA110095.292ENSRBIG00000036587RPA110095.292Rhinopithecus_bieti
ENSPTRG00000008539RPA110089.610ENSRROG00000043278RPA110089.610Rhinopithecus_roxellana
ENSPTRG00000008539RPA19931.782YAR007CRFA19931.782Saccharomyces_cerevisiae
ENSPTRG00000008539RPA19890.397ENSSBOG00000030233RPA19990.397Saimiri_boliviensis_boliviensis
ENSPTRG00000008539RPA19982.651ENSSHAG00000007969RPA19882.623Sarcophilus_harrisii
ENSPTRG00000008539RPA19966.395ENSSFOG00015005362rpa19266.013Scleropages_formosus
ENSPTRG00000008539RPA19952.959ENSSMAG00000019746RPA19951.433Scophthalmus_maximus
ENSPTRG00000008539RPA19963.948ENSSDUG00000011949rpa19964.007Seriola_dumerili
ENSPTRG00000008539RPA19953.294ENSSDUG00000016358RPA18365.079Seriola_dumerili
ENSPTRG00000008539RPA19964.274ENSSLDG00000011806rpa19964.332Seriola_lalandi_dorsalis
ENSPTRG00000008539RPA19065.429ENSSLDG00000020784RPA18264.920Seriola_lalandi_dorsalis
ENSPTRG00000008539RPA18882.353ENSSARG00000007506RPA18982.353Sorex_araneus
ENSPTRG00000008539RPA19672.559ENSSPUG00000007223RPA19872.054Sphenodon_punctatus
ENSPTRG00000008539RPA19963.458ENSSPAG00000009903rpa19963.355Stegastes_partitus
ENSPTRG00000008539RPA19757.025ENSSPAG00000011165RPA19758.362Stegastes_partitus
ENSPTRG00000008539RPA19889.552ENSSSCG00000017822RPA110089.552Sus_scrofa
ENSPTRG00000008539RPA110073.906ENSTGUG00000005775RPA19973.744Taeniopygia_guttata
ENSPTRG00000008539RPA19963.770ENSTRUG00000003616rpa19963.770Takifugu_rubripes
ENSPTRG00000008539RPA19955.534ENSTRUG00000000405RPA17762.785Takifugu_rubripes
ENSPTRG00000008539RPA19964.297ENSTNIG00000016199rpa19964.228Tetraodon_nigroviridis
ENSPTRG00000008539RPA18795.349ENSTBEG00000002709RPA18195.349Tupaia_belangeri
ENSPTRG00000008539RPA19988.274ENSTTRG00000001169RPA19988.274Tursiops_truncatus
ENSPTRG00000008539RPA18891.489ENSUAMG00000015676RPA19988.825Ursus_americanus
ENSPTRG00000008539RPA110088.799ENSUMAG00000009328RPA110088.799Ursus_maritimus
ENSPTRG00000008539RPA110087.662ENSVPAG00000009443RPA110087.662Vicugna_pacos
ENSPTRG00000008539RPA110088.474ENSVVUG00000021715RPA110088.474Vulpes_vulpes
ENSPTRG00000008539RPA19973.115ENSXETG00000013538rpa19974.426Xenopus_tropicalis
ENSPTRG00000008539RPA19361.431ENSXCOG00000010068rpa19462.478Xiphophorus_couchianus
ENSPTRG00000008539RPA19556.485ENSXCOG00000009899-9956.314Xiphophorus_couchianus
ENSPTRG00000008539RPA19962.582ENSXMAG00000004102rpa19963.860Xiphophorus_maculatus
ENSPTRG00000008539RPA19664.172ENSXMAG00000010333RPA18564.172Xiphophorus_maculatus

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