EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000009031 (Gene tree)
Gene ID: 468223
Gene Symbol: RDM1
Alias: -
Full Name: RAD52 motif containing 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 12665 bases
Position: chr17:21251465-21264129
Accession: 12651
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000078092	RRM_1	PF00076.22	1.3e-05	1	1
ENSPTRP00000088095	RRM_1	PF00076.22	1.8e-05	1	1
ENSPTRP00000088191	RRM_1	PF00076.22	3.2e-05	1	1
ENSPTRP00000015408	RRM_1	PF00076.22	3.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000103803	-	420	-	ENSPTRP00000078092	139 (aa)	XP_024206137	A0A2J8LJJ4
ENSPTRT00000016644	-	1169	XM_523614	ENSPTRP00000015408	284 (aa)	XP_523614	H2QCQ8
ENSPTRT00000098790	-	1071	XM_001174001	ENSPTRP00000088191	251 (aa)	XP_001174001	A0A2I3TG22
ENSPTRT00000096510	-	501	-	ENSPTRP00000088095	166 (aa)	-	A0A2I3TFR0

Gene Model

Click here to download ENSPTRG00000009031's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000009031's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000009031	RDM1	100	98.795	ENSG00000278023	RDM1	100	98.795	Homo_sapiens
ENSPTRG00000009031	RDM1	96	45.185	ENSAPOG00000021886	zgc:103564	84	34.783	Acanthochromis_polyacanthus
ENSPTRG00000009031	RDM1	96	45.185	ENSAPEG00000008929	zgc:103564	92	33.730	Amphiprion_percula
ENSPTRG00000009031	RDM1	73	68.317	ENSAPLG00000004384	RDM1	94	53.846	Anas_platyrhynchos
ENSPTRG00000009031	RDM1	95	56.818	ENSACAG00000012989	-	100	49.822	Anolis_carolinensis
ENSPTRG00000009031	RDM1	100	94.245	ENSANAG00000032752	RDM1	100	94.245	Aotus_nancymaae
ENSPTRG00000009031	RDM1	100	89.552	ENSBTAG00000000030	RDM1	100	80.000	Bos_taurus
ENSPTRG00000009031	RDM1	100	94.245	ENSCJAG00000015031	RDM1	100	94.245	Callithrix_jacchus
ENSPTRG00000009031	RDM1	96	76.471	ENSCAFG00000015160	-	100	75.000	Canis_familiaris
ENSPTRG00000009031	RDM1	98	88.806	ENSCHIG00000020607	RDM1	100	80.142	Capra_hircus
ENSPTRG00000009031	RDM1	96	79.699	ENSCPOG00000001495	-	99	69.718	Cavia_porcellus
ENSPTRG00000009031	RDM1	100	93.525	ENSCCAG00000035763	RDM1	100	93.525	Cebus_capucinus
ENSPTRG00000009031	RDM1	100	97.842	ENSCATG00000044451	RDM1	100	97.842	Cercocebus_atys
ENSPTRG00000009031	RDM1	94	91.729	ENSCSAG00000006209	RDM1	100	91.729	Chlorocebus_sabaeus
ENSPTRG00000009031	RDM1	73	73.267	ENSCPBG00000009105	RDM1	93	55.510	Chrysemys_picta_bellii
ENSPTRG00000009031	RDM1	100	96.988	ENSCANG00000041322	RDM1	100	96.988	Colobus_angolensis_palliatus
ENSPTRG00000009031	RDM1	96	80.451	ENSCGRG00001015927	Rdm1	99	73.852	Cricetulus_griseus_chok1gshd
ENSPTRG00000009031	RDM1	94	39.850	ENSCVAG00000001956	zgc:103564	96	35.075	Cyprinodon_variegatus
ENSPTRG00000009031	RDM1	89	82.213	ENSDNOG00000045224	-	94	82.213	Dasypus_novemcinctus
ENSPTRG00000009031	RDM1	73	90.196	ENSEASG00005010554	RDM1	69	82.474	Equus_asinus_asinus
ENSPTRG00000009031	RDM1	96	91.729	ENSECAG00000022182	RDM1	91	82.745	Equus_caballus
ENSPTRG00000009031	RDM1	89	74.206	ENSEEUG00000006127	RDM1	100	74.206	Erinaceus_europaeus
ENSPTRG00000009031	RDM1	100	86.331	ENSFCAG00000043429	RDM1	100	86.331	Felis_catus
ENSPTRG00000009031	RDM1	95	64.394	ENSGALG00000000243	RDM1	97	54.513	Gallus_gallus
ENSPTRG00000009031	RDM1	73	72.277	ENSGAGG00000000293	-	78	54.618	Gopherus_agassizii
ENSPTRG00000009031	RDM1	100	99.398	ENSGGOG00000010584	RDM1	100	99.398	Gorilla_gorilla
ENSPTRG00000009031	RDM1	94	42.424	ENSHCOG00000002518	-	89	36.255	Hippocampus_comes
ENSPTRG00000009031	RDM1	100	88.060	ENSSTOG00000022491	RDM1	100	83.803	Ictidomys_tridecemlineatus
ENSPTRG00000009031	RDM1	96	87.970	ENSLAFG00000029300	RDM1	100	79.021	Loxodonta_africana
ENSPTRG00000009031	RDM1	100	97.842	ENSMFAG00000032968	RDM1	100	97.842	Macaca_fascicularis
ENSPTRG00000009031	RDM1	100	97.761	ENSMMUG00000006847	RDM1	100	97.590	Macaca_mulatta
ENSPTRG00000009031	RDM1	100	97.842	ENSMNEG00000039977	RDM1	100	97.842	Macaca_nemestrina
ENSPTRG00000009031	RDM1	100	97.761	ENSMLEG00000041158	RDM1	100	97.590	Mandrillus_leucophaeus
ENSPTRG00000009031	RDM1	82	63.158	ENSMGAG00000008774	RDM1	96	55.510	Meleagris_gallopavo
ENSPTRG00000009031	RDM1	99	79.851	ENSMAUG00000018559	Rdm1	99	73.592	Mesocricetus_auratus
ENSPTRG00000009031	RDM1	100	93.284	ENSMICG00000038651	RDM1	100	91.304	Microcebus_murinus
ENSPTRG00000009031	RDM1	96	78.195	ENSMOCG00000015095	Rdm1	99	69.565	Microtus_ochrogaster
ENSPTRG00000009031	RDM1	95	73.485	ENSMODG00000011101	RDM1	100	64.493	Monodelphis_domestica
ENSPTRG00000009031	RDM1	96	83.459	MGP_CAROLIEiJ_G0017226	Rdm1	99	73.498	Mus_caroli
ENSPTRG00000009031	RDM1	96	82.707	ENSMUSG00000010362	Rdm1	99	73.571	Mus_musculus
ENSPTRG00000009031	RDM1	99	83.582	MGP_PahariEiJ_G0018356	Rdm1	99	73.592	Mus_pahari
ENSPTRG00000009031	RDM1	96	81.955	MGP_SPRETEiJ_G0018069	Rdm1	99	73.145	Mus_spretus
ENSPTRG00000009031	RDM1	100	89.552	ENSMPUG00000008363	RDM1	100	81.818	Mustela_putorius_furo
ENSPTRG00000009031	RDM1	100	98.239	ENSNLEG00000014173	RDM1	100	98.239	Nomascus_leucogenys
ENSPTRG00000009031	RDM1	95	73.485	ENSMEUG00000015826	RDM1	95	69.068	Notamacropus_eugenii
ENSPTRG00000009031	RDM1	96	84.962	ENSOCUG00000022704	RDM1	97	78.656	Oryctolagus_cuniculus
ENSPTRG00000009031	RDM1	100	86.567	ENSOGAG00000011332	RDM1	100	83.803	Otolemur_garnettii
ENSPTRG00000009031	RDM1	100	99.648	ENSPPAG00000029969	RDM1	100	99.648	Pan_paniscus
ENSPTRG00000009031	RDM1	100	97.122	ENSPANG00000022933	RDM1	100	97.122	Papio_anubis
ENSPTRG00000009031	RDM1	96	79.699	ENSPEMG00000018985	Rdm1	99	72.887	Peromyscus_maniculatus_bairdii
ENSPTRG00000009031	RDM1	100	97.887	ENSPPYG00000008198	RDM1	100	97.887	Pongo_abelii
ENSPTRG00000009031	RDM1	100	88.060	ENSPCOG00000017995	RDM1	100	87.770	Propithecus_coquereli
ENSPTRG00000009031	RDM1	96	90.977	ENSPVAG00000001116	RDM1	100	84.462	Pteropus_vampyrus
ENSPTRG00000009031	RDM1	96	82.707	ENSRNOG00000020751	Rdm1	99	73.214	Rattus_norvegicus
ENSPTRG00000009031	RDM1	100	97.590	ENSRBIG00000030000	RDM1	100	97.590	Rhinopithecus_bieti
ENSPTRG00000009031	RDM1	100	97.590	ENSRROG00000035242	RDM1	100	97.590	Rhinopithecus_roxellana
ENSPTRG00000009031	RDM1	95	76.515	ENSSHAG00000013584	RDM1	100	67.754	Sarcophilus_harrisii
ENSPTRG00000009031	RDM1	93	63.566	ENSSPUG00000010941	RDM1	94	54.340	Sphenodon_punctatus
ENSPTRG00000009031	RDM1	94	46.212	ENSSPAG00000011690	-	95	36.604	Stegastes_partitus
ENSPTRG00000009031	RDM1	81	83.036	ENSSSCG00000017574	-	93	73.214	Sus_scrofa
ENSPTRG00000009031	RDM1	81	84.314	ENSTBEG00000010030	RDM1	99	63.492	Tupaia_belangeri
ENSPTRG00000009031	RDM1	100	89.552	ENSUAMG00000027279	RDM1	100	83.451	Ursus_americanus
ENSPTRG00000009031	RDM1	100	89.552	ENSUMAG00000015423	RDM1	98	83.451	Ursus_maritimus