EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTRG00000009437 (Gene tree)
Gene ID
748578
Gene Symbol
MSI2
Alias
-
Full Name
musashi RNA binding protein 2
Gene Type
protein_coding
Species
Pan_troglodytes
Status
putative
Strand
Plus strand
Length
429524 bases
Position
chr17:56520557-56950080
Accession
51695
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTRP00000064460RRM_1PF00076.222.6e-3412
ENSPTRP00000064460RRM_1PF00076.222.6e-3422
ENSPTRP00000016029RRM_1PF00076.225e-3412
ENSPTRP00000016029RRM_1PF00076.225e-3422
ENSPTRP00000063479RRM_1PF00076.221.8e-1411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTRT00000108645-594-ENSPTRP00000079771197 (aa)-A0A2I3SRX4
ENSPTRT00000108358-804-ENSPTRP00000063479267 (aa)-A0A2I3RFM7
ENSPTRT00000017312-975XM_016932614ENSPTRP00000016029324 (aa)XP_016788103H2QDH9
ENSPTRT00000100798-756XM_016932621ENSPTRP00000064460251 (aa)XP_016788110A0A2I3RJA8
Gene Model
Click here to download ENSPTRG00000009437's gene model file
Pathways
Pathway IDPathway NameSource
ptr03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000009437's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTRG00000009437MSI26943.353ENSPTRG00000048246-7443.529
ENSPTRG00000009437MSI27041.011ENSPTRG00000018253-8338.914
ENSPTRG00000009437MSI26438.667ENSPTRG00000048376-5337.037
ENSPTRG00000009437MSI27032.934ENSPTRG00000044399-6030.516
ENSPTRG00000009437MSI26232.895ENSPTRG00000030691SLIRP7436.000
ENSPTRG00000009437MSI26943.023ENSPTRG00000052291-7935.897
ENSPTRG00000009437MSI25556.000ENSPTRG00000010192CIRBP7442.857
ENSPTRG00000009437MSI27447.027ENSPTRG00000017601HNRNPAB6946.040
ENSPTRG00000009437MSI27044.186ENSPTRG00000012676HNRNPA36540.756
ENSPTRG00000009437MSI28831.507ENSPTRG00000048576-5831.868
ENSPTRG00000009437MSI26840.116ENSPTRG00000052173-7732.394
ENSPTRG00000009437MSI28731.507ENSPTRG00000000136TARDBP6631.507
ENSPTRG00000009437MSI25342.857ENSPTRG00000021864RBM38942.857
ENSPTRG00000009437MSI27042.373ENSPTRG00000017273HNRNPA07339.035
ENSPTRG00000009437MSI27447.568ENSPTRG00000016217HNRNPDL6341.593
ENSPTRG00000009437MSI27347.872ENSPTRG00000016215HNRNPD6447.594
ENSPTRG00000009437MSI27043.023ENSPTRG00000049417HNRNPA17141.758
ENSPTRG00000009437MSI27336.000ENSPTRG00000052587RBMX7348.148
ENSPTRG00000009437MSI26940.698ENSPTRG00000032634-7137.838
ENSPTRG00000009437MSI29239.286ENSPTRG00000013661RBM389434.722
ENSPTRG00000009437MSI27041.279ENSPTRG00000019002HNRNPA2B18437.963
ENSPTRG00000009437MSI26940.588ENSPTRG00000052830-8439.908
ENSPTRG00000009437MSI26833.898ENSPTRG00000012777BOLL6332.787
ENSPTRG00000009437MSI26837.975ENSPTRG00000045033-6735.714
ENSPTRG00000009437MSI210073.214ENSPTRG00000005531MSI19471.471
ENSPTRG00000009437MSI26439.344ENSPTRG00000002996TIAL15539.344
ENSPTRG00000009437MSI27044.915ENSPTRG00000031176-5735.000
ENSPTRG00000009437MSI27240.437ENSPTRG00000048252-9435.227
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTRG00000009437MSI2100100.000ENSG00000153944MSI2100100.000Homo_sapiens
ENSPTRG00000009437MSI210088.615ENSAPOG00000001658msi2a9392.444Acanthochromis_polyacanthus
ENSPTRG00000009437MSI2100100.000ENSAMEG00000002697MSI299100.000Ailuropoda_melanoleuca
ENSPTRG00000009437MSI28987.500ENSACIG00000009475msi2a9775.749Amphilophus_citrinellus
ENSPTRG00000009437MSI26877.692ENSAOCG00000014822msi2a6777.692Amphiprion_ocellaris
ENSPTRG00000009437MSI210088.615ENSAPEG00000007706msi2a9392.444Amphiprion_percula
ENSPTRG00000009437MSI210088.615ENSATEG00000010498msi2a9392.444Anabas_testudineus
ENSPTRG00000009437MSI210087.500ENSATEG00000003301-10092.889Anabas_testudineus
ENSPTRG00000009437MSI29297.849ENSACAG00000005452MSI26897.826Anolis_carolinensis
ENSPTRG00000009437MSI210099.602ENSANAG00000037827MSI210099.602Aotus_nancymaae
ENSPTRG00000009437MSI210088.308ENSACLG00000007752msi2a9392.000Astatotilapia_calliptera
ENSPTRG00000009437MSI29695.000ENSAMXG00000010474msi2b9794.667Astyanax_mexicanus
ENSPTRG00000009437MSI210089.846ENSAMXG00000032796msi2a9492.478Astyanax_mexicanus
ENSPTRG00000009437MSI29798.354ENSBTAG00000004406MSI29899.111Bos_taurus
ENSPTRG00000009437MSI28763.158WBGene00003423msi-17163.158Caenorhabditis_elegans
ENSPTRG00000009437MSI210099.602ENSCJAG00000013998MSI210099.602Callithrix_jacchus
ENSPTRG00000009437MSI210098.746ENSCAFG00020025620MSI28198.746Canis_lupus_dingo
ENSPTRG00000009437MSI210094.136ENSCHIG00000016580MSI29499.111Capra_hircus
ENSPTRG00000009437MSI210089.667ENSCPOG00000034042MSI29989.667Cavia_porcellus
ENSPTRG00000009437MSI210099.602ENSCCAG00000033927MSI210099.602Cebus_capucinus
ENSPTRG00000009437MSI210099.602ENSCATG00000040879MSI210099.602Cercocebus_atys
ENSPTRG00000009437MSI2100100.000ENSCLAG00000014325MSI294100.000Chinchilla_lanigera
ENSPTRG00000009437MSI210094.444ENSCSAG00000005633MSI29499.556Chlorocebus_sabaeus
ENSPTRG00000009437MSI276100.000ENSCHOG00000008660MSI283100.000Choloepus_hoffmanni
ENSPTRG00000009437MSI210093.688ENSCPBG00000009942MSI29693.688Chrysemys_picta_bellii
ENSPTRG00000009437MSI28572.222ENSCING00000018579-9952.838Ciona_intestinalis
ENSPTRG00000009437MSI28766.216ENSCSAVG00000010397-7168.116Ciona_savignyi
ENSPTRG00000009437MSI2100100.000ENSCANG00000036414MSI2100100.000Colobus_angolensis_palliatus
ENSPTRG00000009437MSI210094.154ENSCGRG00001013330Msi29499.115Cricetulus_griseus_chok1gshd
ENSPTRG00000009437MSI210099.692ENSCGRG00000003141Msi210099.692Cricetulus_griseus_crigri
ENSPTRG00000009437MSI210078.730ENSCSEG00000003266-9181.778Cynoglossus_semilaevis
ENSPTRG00000009437MSI26773.006ENSCSEG00000013549msi2a8873.006Cynoglossus_semilaevis
ENSPTRG00000009437MSI28469.340ENSCSEG00000013557msi2a8374.227Cynoglossus_semilaevis
ENSPTRG00000009437MSI210088.308ENSCVAG00000017075msi2a9291.943Cyprinodon_variegatus
ENSPTRG00000009437MSI29295.588ENSDARG00000032614msi2b10098.020Danio_rerio
ENSPTRG00000009437MSI29193.274ENSDARG00000033901msi2a9579.508Danio_rerio
ENSPTRG00000009437MSI210094.118ENSDNOG00000014501MSI210099.556Dasypus_novemcinctus
ENSPTRG00000009437MSI28481.395ENSDORG00000005394Msi28487.817Dipodomys_ordii
ENSPTRG00000009437MSI267100.000ENSDORG00000028440-100100.000Dipodomys_ordii
ENSPTRG00000009437MSI29071.366FBgn0260943Rbp68868.750Drosophila_melanogaster
ENSPTRG00000009437MSI29076.316ENSETEG00000012450-6476.316Echinops_telfairi
ENSPTRG00000009437MSI28481.221ENSEBUG00000006732msi2a8768.489Eptatretus_burgeri
ENSPTRG00000009437MSI2100100.000ENSEASG00005002965MSI29789.112Equus_asinus_asinus
ENSPTRG00000009437MSI210097.289ENSECAG00000011435MSI29497.289Equus_caballus
ENSPTRG00000009437MSI28978.967ENSEEUG00000007810MSI210078.967Erinaceus_europaeus
ENSPTRG00000009437MSI210092.332ENSELUG00000001361msi2b9392.332Esox_lucius
ENSPTRG00000009437MSI29694.167ENSELUG00000011747msi2a9393.333Esox_lucius
ENSPTRG00000009437MSI210099.602ENSFCAG00000041686MSI210099.602Felis_catus
ENSPTRG00000009437MSI26582.308ENSFCAG00000033787-7083.465Felis_catus
ENSPTRG00000009437MSI2100100.000ENSFDAG00000016118MSI2100100.000Fukomys_damarensis
ENSPTRG00000009437MSI210088.308ENSFHEG00000000084msi2a9392.000Fundulus_heteroclitus
ENSPTRG00000009437MSI26496.386ENSGMOG00000007596-8096.386Gadus_morhua
ENSPTRG00000009437MSI210098.457ENSGALG00000005567MSI29498.457Gallus_gallus
ENSPTRG00000009437MSI29576.997ENSGAFG00000006974msi2a7896.154Gambusia_affinis
ENSPTRG00000009437MSI210096.053ENSGAGG00000016542MSI210096.053Gopherus_agassizii
ENSPTRG00000009437MSI2100100.000ENSGGOG00000013182MSI2100100.000Gorilla_gorilla
ENSPTRG00000009437MSI210088.308ENSHBUG00000020800msi2a9392.000Haplochromis_burtoni
ENSPTRG00000009437MSI210090.432ENSHGLG00000012444MSI29390.432Heterocephalus_glaber_female
ENSPTRG00000009437MSI281100.000ENSHGLG00100003744MSI2100100.000Heterocephalus_glaber_male
ENSPTRG00000009437MSI267100.000ENSHGLG00100004028-87100.000Heterocephalus_glaber_male
ENSPTRG00000009437MSI29186.730ENSHCOG00000017241-7187.678Hippocampus_comes
ENSPTRG00000009437MSI29193.274ENSHCOG00000000266msi2a9681.702Hippocampus_comes
ENSPTRG00000009437MSI210087.742ENSIPUG00000021097msi2a9391.556Ictalurus_punctatus
ENSPTRG00000009437MSI29196.861ENSIPUG00000003732msi2b9393.886Ictalurus_punctatus
ENSPTRG00000009437MSI210089.667ENSSTOG00000007884MSI29989.667Ictidomys_tridecemlineatus
ENSPTRG00000009437MSI267100.000ENSJJAG00000009467-100100.000Jaculus_jaculus
ENSPTRG00000009437MSI28188.889ENSJJAG00000006292-10088.406Jaculus_jaculus
ENSPTRG00000009437MSI29193.274ENSKMAG00000009494msi2a9491.469Kryptolebias_marmoratus
ENSPTRG00000009437MSI29383.838ENSLBEG00000026223-10068.915Labrus_bergylta
ENSPTRG00000009437MSI29692.500ENSLBEG00000007061msi2a9392.444Labrus_bergylta
ENSPTRG00000009437MSI27397.030ENSLACG00000016798MSI210097.030Latimeria_chalumnae
ENSPTRG00000009437MSI29196.413ENSLOCG00000004675msi2b9582.466Lepisosteus_oculatus
ENSPTRG00000009437MSI2100100.000ENSMFAG00000003775MSI2100100.000Macaca_fascicularis
ENSPTRG00000009437MSI2100100.000ENSMMUG00000002069MSI2100100.000Macaca_mulatta
ENSPTRG00000009437MSI210099.602ENSMNEG00000045275MSI210099.602Macaca_nemestrina
ENSPTRG00000009437MSI2100100.000ENSMLEG00000033888MSI2100100.000Mandrillus_leucophaeus
ENSPTRG00000009437MSI29194.170ENSMAMG00000002488-8596.154Mastacembelus_armatus
ENSPTRG00000009437MSI210085.455ENSMAMG00000010503msi2a9390.708Mastacembelus_armatus
ENSPTRG00000009437MSI210087.963ENSMZEG00005007676msi2a9992.000Maylandia_zebra
ENSPTRG00000009437MSI210099.692ENSMAUG00000003862Msi29499.692Mesocricetus_auratus
ENSPTRG00000009437MSI210075.692ENSMICG00000032913-9375.217Microcebus_murinus
ENSPTRG00000009437MSI210099.602ENSMICG00000013598-10099.602Microcebus_murinus
ENSPTRG00000009437MSI2100100.000ENSMOCG00000005820Msi294100.000Microtus_ochrogaster
ENSPTRG00000009437MSI29988.889ENSMMOG00000008348msi2a9083.942Mola_mola
ENSPTRG00000009437MSI28198.551ENSMODG00000014790MSI210098.551Monodelphis_domestica
ENSPTRG00000009437MSI210088.615ENSMALG00000000071msi2a9395.420Monopterus_albus
ENSPTRG00000009437MSI2100100.000MGP_CAROLIEiJ_G0016948Msi2100100.000Mus_caroli
ENSPTRG00000009437MSI2100100.000ENSMUSG00000069769Msi2100100.000Mus_musculus
ENSPTRG00000009437MSI2100100.000MGP_PahariEiJ_G0018079Msi2100100.000Mus_pahari
ENSPTRG00000009437MSI2100100.000MGP_SPRETEiJ_G0017795Msi2100100.000Mus_spretus
ENSPTRG00000009437MSI29699.167ENSMPUG00000015377MSI29899.556Mustela_putorius_furo
ENSPTRG00000009437MSI29698.333ENSMLUG00000007865MSI29899.556Myotis_lucifugus
ENSPTRG00000009437MSI2100100.000ENSNGAG00000017807Msi294100.000Nannospalax_galili
ENSPTRG00000009437MSI210085.047ENSNBRG00000014596msi2a9392.000Neolamprologus_brichardi
ENSPTRG00000009437MSI2100100.000ENSNLEG00000008059MSI2100100.000Nomascus_leucogenys
ENSPTRG00000009437MSI29088.816ENSOPRG00000000872-6488.816Ochotona_princeps
ENSPTRG00000009437MSI2100100.000ENSODEG00000011974MSI294100.000Octodon_degus
ENSPTRG00000009437MSI26796.154ENSONIG00000001972msi2a7296.154Oreochromis_niloticus
ENSPTRG00000009437MSI29599.099ENSOANG00000005667MSI27499.099Ornithorhynchus_anatinus
ENSPTRG00000009437MSI29698.750ENSOCUG00000010440MSI29999.556Oryctolagus_cuniculus
ENSPTRG00000009437MSI210087.742ENSORLG00000009671msi2a9592.417Oryzias_latipes
ENSPTRG00000009437MSI210088.615ENSORLG00020021556msi2a9492.444Oryzias_latipes_hni
ENSPTRG00000009437MSI210087.742ENSORLG00015004592msi2a9592.417Oryzias_latipes_hsok
ENSPTRG00000009437MSI210086.520ENSOMEG00000000146msi2a9692.444Oryzias_melastigma
ENSPTRG00000009437MSI210090.123ENSOGAG00000005621MSI29993.333Otolemur_garnettii
ENSPTRG00000009437MSI2100100.000ENSPPAG00000037697MSI2100100.000Pan_paniscus
ENSPTRG00000009437MSI210099.602ENSPPRG00000001848MSI210099.602Panthera_pardus
ENSPTRG00000009437MSI2100100.000ENSPTIG00000021678MSI296100.000Panthera_tigris_altaica
ENSPTRG00000009437MSI29977.559ENSPTIG00000021873-9977.559Panthera_tigris_altaica
ENSPTRG00000009437MSI210099.602ENSPANG00000022319MSI210099.602Papio_anubis
ENSPTRG00000009437MSI25695.714ENSPKIG00000017107-6295.714Paramormyrops_kingsleyae
ENSPTRG00000009437MSI29291.593ENSPKIG00000007038-9480.571Paramormyrops_kingsleyae
ENSPTRG00000009437MSI29198.206ENSPSIG00000008618MSI28297.561Pelodiscus_sinensis
ENSPTRG00000009437MSI210084.735ENSPMGG00000005888msi2a9391.556Periophthalmus_magnuspinnatus
ENSPTRG00000009437MSI267100.000ENSPEMG00000021793-100100.000Peromyscus_maniculatus_bairdii
ENSPTRG00000009437MSI210098.408ENSPCIG00000006063MSI29496.084Phascolarctos_cinereus
ENSPTRG00000009437MSI26694.048ENSPFOG00000019337MSI27494.048Poecilia_formosa
ENSPTRG00000009437MSI26796.522ENSPLAG00000000436msi2a6196.522Poecilia_latipinna
ENSPTRG00000009437MSI27082.645ENSPMEG00000013247msi2a6296.970Poecilia_mexicana
ENSPTRG00000009437MSI29193.722ENSPREG00000000881msi2a9288.889Poecilia_reticulata
ENSPTRG00000009437MSI210089.844ENSPPYG00000008244-9496.000Pongo_abelii
ENSPTRG00000009437MSI27279.793ENSPCAG00000010552MSI210065.625Procavia_capensis
ENSPTRG00000009437MSI274100.000ENSPCOG00000019195-100100.000Propithecus_coquereli
ENSPTRG00000009437MSI210085.531ENSPVAG00000017053MSI29987.556Pteropus_vampyrus
ENSPTRG00000009437MSI210087.963ENSPNYG00000018393msi2a9992.000Pundamilia_nyererei
ENSPTRG00000009437MSI210089.846ENSPNAG00000014957msi2a9493.363Pygocentrus_nattereri
ENSPTRG00000009437MSI210089.711ENSPNAG00000000844msi2b9392.920Pygocentrus_nattereri
ENSPTRG00000009437MSI210093.919ENSRNOG00000025338Msi210099.556Rattus_norvegicus
ENSPTRG00000009437MSI274100.000ENSRROG00000034421-100100.000Rhinopithecus_roxellana
ENSPTRG00000009437MSI2100100.000ENSSBOG00000026425MSI2100100.000Saimiri_boliviensis_boliviensis
ENSPTRG00000009437MSI210098.765ENSSHAG00000008672MSI210098.765Sarcophilus_harrisii
ENSPTRG00000009437MSI210084.568ENSSFOG00015021687-9787.111Scleropages_formosus
ENSPTRG00000009437MSI29187.143ENSSFOG00015012168msi2b7487.204Scleropages_formosus
ENSPTRG00000009437MSI210088.615ENSSMAG00000018484msi2a9392.444Scophthalmus_maximus
ENSPTRG00000009437MSI210085.987ENSSDUG00000021968-8695.385Seriola_dumerili
ENSPTRG00000009437MSI210088.615ENSSDUG00000014507msi2a9392.444Seriola_dumerili
ENSPTRG00000009437MSI210085.358ENSSLDG00000017172msi2a9392.444Seriola_lalandi_dorsalis
ENSPTRG00000009437MSI27095.620ENSSPUG00000000913-8295.620Sphenodon_punctatus
ENSPTRG00000009437MSI29293.365ENSSPAG00000017793msi2a9582.547Stegastes_partitus
ENSPTRG00000009437MSI2100100.000ENSSSCG00000038505MSI297100.000Sus_scrofa
ENSPTRG00000009437MSI28199.034ENSTGUG00000008452MSI210099.034Taeniopygia_guttata
ENSPTRG00000009437MSI210087.179ENSTRUG00000021248msi2a8891.556Takifugu_rubripes
ENSPTRG00000009437MSI29083.636ENSTBEG00000001241MSI26783.636Tupaia_belangeri
ENSPTRG00000009437MSI290100.000ENSTTRG00000002189MSI29589.778Tursiops_truncatus
ENSPTRG00000009437MSI210099.602ENSUAMG00000000700MSI210099.602Ursus_americanus
ENSPTRG00000009437MSI29297.970ENSUMAG00000000505MSI29589.623Ursus_maritimus
ENSPTRG00000009437MSI28084.615ENSVPAG00000006837-6284.615Vicugna_pacos
ENSPTRG00000009437MSI2100100.000ENSVVUG00000011783MSI294100.000Vulpes_vulpes
ENSPTRG00000009437MSI29093.213ENSXCOG00000006113msi2a8887.500Xiphophorus_couchianus
ENSPTRG00000009437MSI210088.308ENSXMAG00000000608msi2a9291.943Xiphophorus_maculatus

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