EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000009598 (Gene tree)
Gene ID: -
Gene Symbol: CPSF4L
Alias: -
Full Name: cleavage and polyadenylation specific factor 4 like
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 13368 bases
Position: chr17:72723161-72736528
Accession: 12055
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000016303	zf-CCCH	PF00642.24	5.5e-18	1	1
ENSPTRP00000064745	zf-CCCH	PF00642.24	6.3e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000017597	-	540	XM_016932860	ENSPTRP00000016303	179 (aa)	XP_016788349	H2QDS1
ENSPTRT00000082974	-	459	-	ENSPTRP00000064745	152 (aa)	-	A0A2I3RK59

Gene Model

Click here to download ENSPTRG00000009598's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000009598's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000009598	CPSF4L	92	67.683	ENSPTRG00000019453	CPSF4	64	64.740

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000009598	CPSF4L	100	100.000	ENSG00000187959	CPSF4L	100	100.000	Homo_sapiens
ENSPTRG00000009598	CPSF4L	99	82.022	ENSAMEG00000002707	CPSF4L	65	82.022	Ailuropoda_melanoleuca
ENSPTRG00000009598	CPSF4L	99	60.265	ENSANAG00000026558	-	100	60.265	Aotus_nancymaae
ENSPTRG00000009598	CPSF4L	91	75.460	ENSCJAG00000019911	CPSF4L	96	75.460	Callithrix_jacchus
ENSPTRG00000009598	CPSF4L	52	75.949	ENSCCAG00000030566	CPSF4L	66	75.949	Cebus_capucinus
ENSPTRG00000009598	CPSF4L	100	95.531	ENSCATG00000044555	CPSF4L	100	95.531	Cercocebus_atys
ENSPTRG00000009598	CPSF4L	100	94.444	ENSCSAG00000004429	CPSF4L	100	94.444	Chlorocebus_sabaeus
ENSPTRG00000009598	CPSF4L	100	95.531	ENSCANG00000035042	CPSF4L	100	95.531	Colobus_angolensis_palliatus
ENSPTRG00000009598	CPSF4L	99	74.719	ENSCGRG00001020079	Cpsf4l	99	74.719	Cricetulus_griseus_chok1gshd
ENSPTRG00000009598	CPSF4L	99	74.719	ENSCGRG00000010419	Cpsf4l	99	74.719	Cricetulus_griseus_crigri
ENSPTRG00000009598	CPSF4L	93	89.222	ENSDNOG00000014458	CPSF4L	87	89.222	Dasypus_novemcinctus
ENSPTRG00000009598	CPSF4L	93	89.759	ENSEASG00005018763	CPSF4L	100	89.759	Equus_asinus_asinus
ENSPTRG00000009598	CPSF4L	93	89.759	ENSECAG00000024813	CPSF4L	100	89.759	Equus_caballus
ENSPTRG00000009598	CPSF4L	93	87.349	ENSFCAG00000004745	CPSF4L	66	87.349	Felis_catus
ENSPTRG00000009598	CPSF4L	100	98.883	ENSGGOG00000026659	CPSF4L	100	98.883	Gorilla_gorilla
ENSPTRG00000009598	CPSF4L	93	86.747	ENSSTOG00000001849	CPSF4L	95	86.747	Ictidomys_tridecemlineatus
ENSPTRG00000009598	CPSF4L	99	79.213	ENSLAFG00000010697	CPSF4L	100	79.213	Loxodonta_africana
ENSPTRG00000009598	CPSF4L	100	95.531	ENSMFAG00000037840	CPSF4L	100	95.531	Macaca_fascicularis
ENSPTRG00000009598	CPSF4L	100	95.531	ENSMMUG00000001271	CPSF4L	100	95.531	Macaca_mulatta
ENSPTRG00000009598	CPSF4L	100	95.531	ENSMNEG00000045419	CPSF4L	100	95.531	Macaca_nemestrina
ENSPTRG00000009598	CPSF4L	100	96.089	ENSMLEG00000038527	CPSF4L	100	96.089	Mandrillus_leucophaeus
ENSPTRG00000009598	CPSF4L	93	80.120	ENSMAUG00000019519	-	100	80.120	Mesocricetus_auratus
ENSPTRG00000009598	CPSF4L	98	90.857	ENSMICG00000007503	CPSF4L	98	90.857	Microcebus_murinus
ENSPTRG00000009598	CPSF4L	75	80.000	ENSMOCG00000015313	-	93	80.000	Microtus_ochrogaster
ENSPTRG00000009598	CPSF4L	91	76.543	ENSMODG00000025672	CPSF4L	100	76.543	Monodelphis_domestica
ENSPTRG00000009598	CPSF4L	93	74.850	MGP_CAROLIEiJ_G0017369	-	73	74.850	Mus_caroli
ENSPTRG00000009598	CPSF4L	93	75.449	ENSMUSG00000018727	Cpsf4l	73	75.449	Mus_musculus
ENSPTRG00000009598	CPSF4L	96	58.784	MGP_PahariEiJ_G0018499	-	92	58.784	Mus_pahari
ENSPTRG00000009598	CPSF4L	70	71.963	MGP_SPRETEiJ_G0018215	-	82	67.200	Mus_spretus
ENSPTRG00000009598	CPSF4L	93	85.030	ENSMPUG00000014276	CPSF4L	100	85.030	Mustela_putorius_furo
ENSPTRG00000009598	CPSF4L	100	77.095	ENSMLUG00000009617	CPSF4L	100	77.095	Myotis_lucifugus
ENSPTRG00000009598	CPSF4L	92	81.707	ENSNGAG00000009325	-	96	81.707	Nannospalax_galili
ENSPTRG00000009598	CPSF4L	100	99.441	ENSNLEG00000001420	CPSF4L	100	99.441	Nomascus_leucogenys
ENSPTRG00000009598	CPSF4L	66	77.228	ENSMEUG00000004051	-	99	77.228	Notamacropus_eugenii
ENSPTRG00000009598	CPSF4L	96	68.493	ENSOPRG00000007484	-	99	68.493	Ochotona_princeps
ENSPTRG00000009598	CPSF4L	93	81.928	ENSOCUG00000026495	CPSF4L	74	81.928	Oryctolagus_cuniculus
ENSPTRG00000009598	CPSF4L	100	99.342	ENSPPAG00000037000	-	100	100.000	Pan_paniscus
ENSPTRG00000009598	CPSF4L	97	71.429	ENSPPRG00000001058	CPSF4L	100	71.429	Panthera_pardus
ENSPTRG00000009598	CPSF4L	94	75.148	ENSPTIG00000012676	CPSF4L	100	71.429	Panthera_tigris_altaica
ENSPTRG00000009598	CPSF4L	100	96.089	ENSPANG00000020331	CPSF4L	100	96.089	Papio_anubis
ENSPTRG00000009598	CPSF4L	93	79.518	ENSPEMG00000011680	Cpsf4l	80	71.545	Peromyscus_maniculatus_bairdii
ENSPTRG00000009598	CPSF4L	94	76.190	ENSPCIG00000001889	CPSF4L	99	76.190	Phascolarctos_cinereus
ENSPTRG00000009598	CPSF4L	100	98.026	ENSPPYG00000008589	-	100	98.026	Pongo_abelii
ENSPTRG00000009598	CPSF4L	100	85.165	ENSPCOG00000021801	CPSF4L	100	85.165	Propithecus_coquereli
ENSPTRG00000009598	CPSF4L	97	76.351	ENSPVAG00000006736	CPSF4L	99	76.351	Pteropus_vampyrus
ENSPTRG00000009598	CPSF4L	100	94.972	ENSRBIG00000029048	CPSF4L	100	94.972	Rhinopithecus_bieti
ENSPTRG00000009598	CPSF4L	100	94.413	ENSRROG00000037051	CPSF4L	100	94.413	Rhinopithecus_roxellana
ENSPTRG00000009598	CPSF4L	99	78.808	ENSTTRG00000005243	CPSF4L	100	78.808	Tursiops_truncatus
ENSPTRG00000009598	CPSF4L	75	89.630	ENSUAMG00000007728	CPSF4L	86	89.630	Ursus_americanus
ENSPTRG00000009598	CPSF4L	75	89.630	ENSUMAG00000007869	CPSF4L	86	89.630	Ursus_maritimus