EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000009646 (Gene tree)
Gene ID: 737516
Gene Symbol: TSEN54
Alias: -
Full Name: tRNA splicing endonuclease subunit 54
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 8256 bases
Position: chr17:75062796-75071051
Accession: 9743
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000061662	tRNA_int_end_N2	PF12928.7	7.9e-18	1	1
ENSPTRP00000016389	tRNA_int_end_N2	PF12928.7	8.1e-18	1	1
ENSPTRP00000080061	tRNA_int_end_N2	PF12928.7	5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000077273	-	537	-	ENSPTRP00000080061	178 (aa)	-	A0A2I3SSS9
ENSPTRT00000017690	-	1938	XM_001143195	ENSPTRP00000016389	526 (aa)	XP_001143195	H2QDV6
ENSPTRT00000085574	-	1584	-	ENSPTRP00000061662	527 (aa)	-	A0A2I3RAK1

Gene Model

Click here to download ENSPTRG00000009646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000009646's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000009646	TSEN54	100	99.620	ENSG00000182173	TSEN54	100	100.000	Homo_sapiens
ENSPTRG00000009646	TSEN54	97	46.484	ENSAPOG00000009659	tsen54	77	64.773	Acanthochromis_polyacanthus
ENSPTRG00000009646	TSEN54	99	82.075	ENSAMEG00000009414	TSEN54	99	81.887	Ailuropoda_melanoleuca
ENSPTRG00000009646	TSEN54	73	50.000	ENSACIG00000010899	-	74	50.000	Amphilophus_citrinellus
ENSPTRG00000009646	TSEN54	97	46.875	ENSAOCG00000000152	tsen54	95	45.736	Amphiprion_ocellaris
ENSPTRG00000009646	TSEN54	97	46.289	ENSAPEG00000018931	tsen54	94	45.155	Amphiprion_percula
ENSPTRG00000009646	TSEN54	97	44.318	ENSATEG00000019860	tsen54	97	43.762	Anabas_testudineus
ENSPTRG00000009646	TSEN54	74	65.649	ENSAPLG00000009419	TSEN54	100	51.634	Anas_platyrhynchos
ENSPTRG00000009646	TSEN54	99	51.326	ENSACAG00000006714	TSEN54	99	51.136	Anolis_carolinensis
ENSPTRG00000009646	TSEN54	99	94.220	ENSANAG00000024061	TSEN54	99	94.095	Aotus_nancymaae
ENSPTRG00000009646	TSEN54	97	46.743	ENSACLG00000019800	tsen54	96	46.332	Astatotilapia_calliptera
ENSPTRG00000009646	TSEN54	96	48.633	ENSAMXG00000006546	tsen54	96	46.845	Astyanax_mexicanus
ENSPTRG00000009646	TSEN54	100	83.239	ENSBTAG00000000824	TSEN54	100	83.239	Bos_taurus
ENSPTRG00000009646	TSEN54	99	93.064	ENSCJAG00000014278	TSEN54	99	92.952	Callithrix_jacchus
ENSPTRG00000009646	TSEN54	100	85.687	ENSCAFG00000004798	TSEN54	100	85.687	Canis_familiaris
ENSPTRG00000009646	TSEN54	100	85.687	ENSCAFG00020000312	TSEN54	100	85.687	Canis_lupus_dingo
ENSPTRG00000009646	TSEN54	100	82.700	ENSCHIG00000019908	TSEN54	100	81.559	Capra_hircus
ENSPTRG00000009646	TSEN54	86	83.516	ENSTSYG00000037439	TSEN54	100	83.516	Carlito_syrichta
ENSPTRG00000009646	TSEN54	99	82.486	ENSCPOG00000004630	-	99	81.921	Cavia_porcellus
ENSPTRG00000009646	TSEN54	99	93.642	ENSCCAG00000036624	TSEN54	99	93.524	Cebus_capucinus
ENSPTRG00000009646	TSEN54	99	96.952	ENSCATG00000042877	TSEN54	99	96.952	Cercocebus_atys
ENSPTRG00000009646	TSEN54	97	83.789	ENSCLAG00000002924	TSEN54	99	83.810	Chinchilla_lanigera
ENSPTRG00000009646	TSEN54	100	96.578	ENSCSAG00000004809	TSEN54	100	96.578	Chlorocebus_sabaeus
ENSPTRG00000009646	TSEN54	99	56.309	ENSCPBG00000028071	TSEN54	99	55.451	Chrysemys_picta_bellii
ENSPTRG00000009646	TSEN54	54	41.176	ENSCING00000018281	-	62	36.923	Ciona_intestinalis
ENSPTRG00000009646	TSEN54	100	95.437	ENSCANG00000028053	TSEN54	100	95.437	Colobus_angolensis_palliatus
ENSPTRG00000009646	TSEN54	100	82.129	ENSCGRG00001020029	Tsen54	100	81.749	Cricetulus_griseus_chok1gshd
ENSPTRG00000009646	TSEN54	84	80.361	ENSCGRG00000016289	Tsen54	100	79.910	Cricetulus_griseus_crigri
ENSPTRG00000009646	TSEN54	80	39.723	ENSCSEG00000020586	tsen54	99	39.261	Cynoglossus_semilaevis
ENSPTRG00000009646	TSEN54	54	58.763	ENSCVAG00000006741	-	76	57.000	Cyprinodon_variegatus
ENSPTRG00000009646	TSEN54	80	44.000	ENSDARG00000036844	tsen54	99	43.662	Danio_rerio
ENSPTRG00000009646	TSEN54	100	82.298	ENSDNOG00000018452	TSEN54	100	82.298	Dasypus_novemcinctus
ENSPTRG00000009646	TSEN54	100	83.840	ENSDORG00000004073	Tsen54	100	83.650	Dipodomys_ordii
ENSPTRG00000009646	TSEN54	97	37.757	ENSEBUG00000005203	TSEN54	95	37.288	Eptatretus_burgeri
ENSPTRG00000009646	TSEN54	100	84.181	ENSEASG00005000579	TSEN54	100	83.804	Equus_asinus_asinus
ENSPTRG00000009646	TSEN54	100	84.181	ENSECAG00000004924	TSEN54	100	83.804	Equus_caballus
ENSPTRG00000009646	TSEN54	86	79.431	ENSEEUG00000008467	TSEN54	100	79.431	Erinaceus_europaeus
ENSPTRG00000009646	TSEN54	97	44.867	ENSELUG00000017703	tsen54	90	43.017	Esox_lucius
ENSPTRG00000009646	TSEN54	99	85.038	ENSFCAG00000023712	TSEN54	99	85.038	Felis_catus
ENSPTRG00000009646	TSEN54	94	53.320	ENSFALG00000001119	TSEN54	99	51.515	Ficedula_albicollis
ENSPTRG00000009646	TSEN54	86	84.071	ENSFDAG00000019090	TSEN54	99	84.000	Fukomys_damarensis
ENSPTRG00000009646	TSEN54	97	47.093	ENSFHEG00000005470	tsen54	96	46.139	Fundulus_heteroclitus
ENSPTRG00000009646	TSEN54	90	39.726	ENSGMOG00000013146	tsen54	99	45.029	Gadus_morhua
ENSPTRG00000009646	TSEN54	95	49.206	ENSGALG00000047163	TSEN54	98	48.024	Gallus_gallus
ENSPTRG00000009646	TSEN54	99	46.053	ENSGAFG00000005111	tsen54	99	46.415	Gambusia_affinis
ENSPTRG00000009646	TSEN54	96	44.402	ENSGACG00000014987	tsen54	99	44.788	Gasterosteus_aculeatus
ENSPTRG00000009646	TSEN54	100	57.276	ENSGAGG00000006825	TSEN54	99	56.215	Gopherus_agassizii
ENSPTRG00000009646	TSEN54	97	99.606	ENSGGOG00000009417	TSEN54	100	99.606	Gorilla_gorilla
ENSPTRG00000009646	TSEN54	85	57.051	ENSHBUG00000018296	tsen54	99	37.296	Haplochromis_burtoni
ENSPTRG00000009646	TSEN54	100	86.122	ENSHGLG00000007979	TSEN54	100	85.932	Heterocephalus_glaber_female
ENSPTRG00000009646	TSEN54	100	85.361	ENSHGLG00100005497	TSEN54	100	85.171	Heterocephalus_glaber_male
ENSPTRG00000009646	TSEN54	80	43.692	ENSHCOG00000007481	tsen54	99	42.130	Hippocampus_comes
ENSPTRG00000009646	TSEN54	99	41.556	ENSIPUG00000000590	tsen54	79	60.714	Ictalurus_punctatus
ENSPTRG00000009646	TSEN54	100	81.179	ENSSTOG00000012883	TSEN54	100	80.228	Ictidomys_tridecemlineatus
ENSPTRG00000009646	TSEN54	100	82.008	ENSJJAG00000007365	Tsen54	100	81.629	Jaculus_jaculus
ENSPTRG00000009646	TSEN54	97	46.904	ENSKMAG00000006944	tsen54	97	45.665	Kryptolebias_marmoratus
ENSPTRG00000009646	TSEN54	97	44.660	ENSLBEG00000004199	tsen54	97	45.049	Labrus_bergylta
ENSPTRG00000009646	TSEN54	97	48.649	ENSLACG00000009497	TSEN54	100	47.692	Latimeria_chalumnae
ENSPTRG00000009646	TSEN54	98	48.859	ENSLOCG00000011191	tsen54	76	66.857	Lepisosteus_oculatus
ENSPTRG00000009646	TSEN54	99	76.560	ENSLAFG00000011655	TSEN54	99	76.560	Loxodonta_africana
ENSPTRG00000009646	TSEN54	100	96.768	ENSMFAG00000000712	TSEN54	100	96.768	Macaca_fascicularis
ENSPTRG00000009646	TSEN54	99	97.175	ENSMMUG00000022123	TSEN54	99	97.175	Macaca_mulatta
ENSPTRG00000009646	TSEN54	99	97.740	ENSMNEG00000029199	TSEN54	99	97.740	Macaca_nemestrina
ENSPTRG00000009646	TSEN54	86	96.681	ENSMLEG00000044168	TSEN54	88	96.681	Mandrillus_leucophaeus
ENSPTRG00000009646	TSEN54	98	45.143	ENSMAMG00000019773	tsen54	98	44.381	Mastacembelus_armatus
ENSPTRG00000009646	TSEN54	97	46.743	ENSMZEG00005000884	tsen54	96	46.332	Maylandia_zebra
ENSPTRG00000009646	TSEN54	99	48.776	ENSMGAG00000009556	TSEN54	99	47.925	Meleagris_gallopavo
ENSPTRG00000009646	TSEN54	100	81.559	ENSMAUG00000016838	Tsen54	100	81.179	Mesocricetus_auratus
ENSPTRG00000009646	TSEN54	100	85.551	ENSMICG00000044012	TSEN54	100	84.030	Microcebus_murinus
ENSPTRG00000009646	TSEN54	100	82.319	ENSMOCG00000021585	Tsen54	100	81.939	Microtus_ochrogaster
ENSPTRG00000009646	TSEN54	96	43.504	ENSMMOG00000020189	tsen54	98	43.922	Mola_mola
ENSPTRG00000009646	TSEN54	98	68.233	ENSMODG00000007438	TSEN54	98	68.587	Monodelphis_domestica
ENSPTRG00000009646	TSEN54	97	45.857	ENSMALG00000020573	tsen54	97	45.889	Monopterus_albus
ENSPTRG00000009646	TSEN54	100	80.038	MGP_CAROLIEiJ_G0017417	Tsen54	100	79.658	Mus_caroli
ENSPTRG00000009646	TSEN54	100	80.608	ENSMUSG00000020781	Tsen54	100	80.228	Mus_musculus
ENSPTRG00000009646	TSEN54	100	80.418	MGP_PahariEiJ_G0018547	Tsen54	100	80.038	Mus_pahari
ENSPTRG00000009646	TSEN54	100	80.608	MGP_SPRETEiJ_G0018262	Tsen54	100	80.228	Mus_spretus
ENSPTRG00000009646	TSEN54	100	83.427	ENSMPUG00000013870	TSEN54	100	83.427	Mustela_putorius_furo
ENSPTRG00000009646	TSEN54	100	80.038	ENSMLUG00000015298	TSEN54	100	80.038	Myotis_lucifugus
ENSPTRG00000009646	TSEN54	100	82.510	ENSNGAG00000015673	Tsen54	100	81.559	Nannospalax_galili
ENSPTRG00000009646	TSEN54	85	98.026	ENSNLEG00000001071	-	99	98.026	Nomascus_leucogenys
ENSPTRG00000009646	TSEN54	89	64.557	ENSMEUG00000011908	TSEN54	100	64.557	Notamacropus_eugenii
ENSPTRG00000009646	TSEN54	100	75.712	ENSOPRG00000012513	TSEN54	100	75.712	Ochotona_princeps
ENSPTRG00000009646	TSEN54	92	83.436	ENSODEG00000010059	-	99	81.921	Octodon_degus
ENSPTRG00000009646	TSEN54	88	56.875	ENSONIG00000009543	tsen54	96	46.360	Oreochromis_niloticus
ENSPTRG00000009646	TSEN54	99	76.923	ENSOCUG00000009875	TSEN54	99	76.735	Oryctolagus_cuniculus
ENSPTRG00000009646	TSEN54	98	45.489	ENSORLG00000000852	tsen54	98	44.190	Oryzias_latipes
ENSPTRG00000009646	TSEN54	98	45.681	ENSORLG00020018221	tsen54	98	44.762	Oryzias_latipes_hni
ENSPTRG00000009646	TSEN54	98	45.298	ENSORLG00015009413	tsen54	97	53.548	Oryzias_latipes_hsok
ENSPTRG00000009646	TSEN54	98	45.681	ENSOMEG00000014402	tsen54	96	44.886	Oryzias_melastigma
ENSPTRG00000009646	TSEN54	100	80.228	ENSOGAG00000001442	TSEN54	100	80.228	Otolemur_garnettii
ENSPTRG00000009646	TSEN54	86	80.525	ENSOARG00000010361	TSEN54	100	80.525	Ovis_aries
ENSPTRG00000009646	TSEN54	94	99.396	ENSPPAG00000043519	TSEN54	100	99.396	Pan_paniscus
ENSPTRG00000009646	TSEN54	99	84.659	ENSPPRG00000009162	TSEN54	99	84.659	Panthera_pardus
ENSPTRG00000009646	TSEN54	86	83.850	ENSPTIG00000019312	TSEN54	96	83.850	Panthera_tigris_altaica
ENSPTRG00000009646	TSEN54	99	97.727	ENSPANG00000020133	TSEN54	98	97.727	Papio_anubis
ENSPTRG00000009646	TSEN54	97	46.533	ENSPKIG00000023018	tsen54	100	45.349	Paramormyrops_kingsleyae
ENSPTRG00000009646	TSEN54	80	53.009	ENSPSIG00000012807	TSEN54	99	51.963	Pelodiscus_sinensis
ENSPTRG00000009646	TSEN54	92	36.382	ENSPMGG00000019578	tsen54	99	36.456	Periophthalmus_magnuspinnatus
ENSPTRG00000009646	TSEN54	100	82.319	ENSPEMG00000014857	Tsen54	100	81.939	Peromyscus_maniculatus_bairdii
ENSPTRG00000009646	TSEN54	99	47.004	ENSPFOG00000022740	tsen54	99	47.092	Poecilia_formosa
ENSPTRG00000009646	TSEN54	99	47.081	ENSPLAG00000014847	tsen54	99	47.170	Poecilia_latipinna
ENSPTRG00000009646	TSEN54	99	46.893	ENSPMEG00000022876	tsen54	99	46.981	Poecilia_mexicana
ENSPTRG00000009646	TSEN54	99	46.328	ENSPREG00000013090	tsen54	99	45.574	Poecilia_reticulata
ENSPTRG00000009646	TSEN54	91	88.935	ENSPPYG00000008629	TSEN54	100	88.935	Pongo_abelii
ENSPTRG00000009646	TSEN54	95	71.344	ENSPCAG00000002093	TSEN54	99	69.461	Procavia_capensis
ENSPTRG00000009646	TSEN54	99	87.572	ENSPCOG00000027880	TSEN54	99	87.189	Propithecus_coquereli
ENSPTRG00000009646	TSEN54	100	84.746	ENSPVAG00000008446	TSEN54	100	84.746	Pteropus_vampyrus
ENSPTRG00000009646	TSEN54	81	58.503	ENSPNYG00000010217	tsen54	99	44.489	Pundamilia_nyererei
ENSPTRG00000009646	TSEN54	98	45.113	ENSPNAG00000003770	tsen54	81	57.949	Pygocentrus_nattereri
ENSPTRG00000009646	TSEN54	100	81.749	ENSRNOG00000004598	Tsen54	100	81.369	Rattus_norvegicus
ENSPTRG00000009646	TSEN54	100	96.198	ENSRBIG00000043040	TSEN54	100	96.198	Rhinopithecus_bieti
ENSPTRG00000009646	TSEN54	100	96.198	ENSRROG00000030797	TSEN54	100	96.198	Rhinopithecus_roxellana
ENSPTRG00000009646	TSEN54	99	90.667	ENSSBOG00000013543	TSEN54	99	90.667	Saimiri_boliviensis_boliviensis
ENSPTRG00000009646	TSEN54	99	65.613	ENSSHAG00000018127	TSEN54	98	65.672	Sarcophilus_harrisii
ENSPTRG00000009646	TSEN54	81	45.517	ENSSFOG00015004093	tsen54	100	44.368	Scleropages_formosus
ENSPTRG00000009646	TSEN54	98	43.762	ENSSMAG00000012449	tsen54	99	43.822	Scophthalmus_maximus
ENSPTRG00000009646	TSEN54	97	45.611	ENSSDUG00000021506	tsen54	97	46.124	Seriola_dumerili
ENSPTRG00000009646	TSEN54	97	45.420	ENSSLDG00000016303	tsen54	97	45.930	Seriola_lalandi_dorsalis
ENSPTRG00000009646	TSEN54	84	58.667	ENSSPUG00000008988	TSEN54	100	50.225	Sphenodon_punctatus
ENSPTRG00000009646	TSEN54	80	42.925	ENSSPAG00000008047	tsen54	99	42.217	Stegastes_partitus
ENSPTRG00000009646	TSEN54	92	46.640	ENSSPAG00000008098	-	99	44.534	Stegastes_partitus
ENSPTRG00000009646	TSEN54	100	84.934	ENSSSCG00000036852	TSEN54	100	84.934	Sus_scrofa
ENSPTRG00000009646	TSEN54	86	53.540	ENSTGUG00000008548	TSEN54	100	53.540	Taeniopygia_guttata
ENSPTRG00000009646	TSEN54	97	45.597	ENSTRUG00000004230	tsen54	87	61.850	Takifugu_rubripes
ENSPTRG00000009646	TSEN54	99	45.038	ENSTNIG00000011281	tsen54	99	44.612	Tetraodon_nigroviridis
ENSPTRG00000009646	TSEN54	86	84.279	ENSTTRG00000015828	TSEN54	100	84.279	Tursiops_truncatus
ENSPTRG00000009646	TSEN54	99	84.746	ENSUAMG00000010045	TSEN54	99	84.746	Ursus_americanus
ENSPTRG00000009646	TSEN54	84	82.022	ENSUMAG00000008979	TSEN54	100	81.798	Ursus_maritimus
ENSPTRG00000009646	TSEN54	97	85.185	ENSVVUG00000011411	TSEN54	98	85.049	Vulpes_vulpes
ENSPTRG00000009646	TSEN54	99	49.529	ENSXETG00000012532	tsen54	99	68.333	Xenopus_tropicalis
ENSPTRG00000009646	TSEN54	97	36.852	ENSXCOG00000018245	tsen54	87	60.625	Xiphophorus_couchianus
ENSPTRG00000009646	TSEN54	99	46.328	ENSXMAG00000018818	tsen54	99	46.516	Xiphophorus_maculatus