EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000009699 (Gene tree)
Gene ID: 741899
Gene Symbol: TNRC6C
Alias: -
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 107921 bases
Position: chr17:77603873-77711793
Accession: 48949
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000087691	Ago_hook	PF10427.9	1.6e-21	1	1
ENSPTRP00000063588	Ago_hook	PF10427.9	1.8e-21	1	1
ENSPTRP00000016495	Ago_hook	PF10427.9	1.9e-21	1	1
ENSPTRP00000084787	Ago_hook	PF10427.9	3e-21	1	1
ENSPTRP00000087691	RRM_1	PF00076.22	0.00038	1	1
ENSPTRP00000063588	RRM_1	PF00076.22	0.00039	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000097232	-	5832	XM_009433383	ENSPTRP00000084787	1943 (aa)	XP_009431658	A0A2I3T6F7
ENSPTRT00000096737	-	9751	XM_016933006	ENSPTRP00000063588	1725 (aa)	XP_016788495	A0A2J8K7Q4
ENSPTRT00000104822	-	9643	-	ENSPTRP00000087691	1689 (aa)	-	A0A2J8K7Q0
ENSPTRT00000017804	-	5763	-	ENSPTRP00000016495	1920 (aa)	-	H2QDY9

Gene Model

Click here to download ENSPTRG00000009699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000009699's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000009699	TNRC6C	99	38.023	ENSPTRG00000047826	TNRC6B	89	53.012
ENSPTRG00000009699	TNRC6C	98	44.233	ENSPTRG00000007898	TNRC6A	99	42.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000009699	TNRC6C	100	99.743	ENSG00000078687	TNRC6C	100	100.000	Homo_sapiens
ENSPTRG00000009699	TNRC6C	80	54.382	ENSAPOG00000019749	tnrc6c1	98	49.077	Acanthochromis_polyacanthus
ENSPTRG00000009699	TNRC6C	100	89.724	ENSAMEG00000013756	TNRC6C	99	89.468	Ailuropoda_melanoleuca
ENSPTRG00000009699	TNRC6C	94	48.210	ENSACIG00000008075	tnrc6c1	98	54.235	Amphilophus_citrinellus
ENSPTRG00000009699	TNRC6C	77	69.280	ENSAOCG00000023968	tnrc6c1	99	49.078	Amphiprion_ocellaris
ENSPTRG00000009699	TNRC6C	80	54.424	ENSAPEG00000009020	tnrc6c1	99	48.975	Amphiprion_percula
ENSPTRG00000009699	TNRC6C	100	87.049	ENSAPLG00000005456	TNRC6C	100	86.577	Anas_platyrhynchos
ENSPTRG00000009699	TNRC6C	100	87.384	ENSACAG00000016198	TNRC6C	98	86.615	Anolis_carolinensis
ENSPTRG00000009699	TNRC6C	100	98.250	ENSANAG00000021554	TNRC6C	100	98.250	Aotus_nancymaae
ENSPTRG00000009699	TNRC6C	94	48.419	ENSACLG00000000424	tnrc6c1	98	53.243	Astatotilapia_calliptera
ENSPTRG00000009699	TNRC6C	100	87.891	ENSBTAG00000018658	TNRC6C	100	88.187	Bos_taurus
ENSPTRG00000009699	TNRC6C	100	98.147	ENSCJAG00000019431	TNRC6C	100	98.147	Callithrix_jacchus
ENSPTRG00000009699	TNRC6C	100	91.546	ENSCAFG00000005224	TNRC6C	99	91.207	Canis_familiaris
ENSPTRG00000009699	TNRC6C	100	91.182	ENSCAFG00020006661	TNRC6C	99	91.601	Canis_lupus_dingo
ENSPTRG00000009699	TNRC6C	100	87.574	ENSCHIG00000026004	TNRC6C	100	86.118	Capra_hircus
ENSPTRG00000009699	TNRC6C	100	95.768	ENSTSYG00000005403	TNRC6C	100	95.768	Carlito_syrichta
ENSPTRG00000009699	TNRC6C	100	85.227	ENSCAPG00000007307	TNRC6C	99	84.390	Cavia_aperea
ENSPTRG00000009699	TNRC6C	100	90.468	ENSCPOG00000000467	TNRC6C	100	88.503	Cavia_porcellus
ENSPTRG00000009699	TNRC6C	100	98.377	ENSCCAG00000030524	TNRC6C	100	98.377	Cebus_capucinus
ENSPTRG00000009699	TNRC6C	100	98.899	ENSCATG00000033135	TNRC6C	100	98.899	Cercocebus_atys
ENSPTRG00000009699	TNRC6C	100	93.132	ENSCLAG00000011139	TNRC6C	99	90.521	Chinchilla_lanigera
ENSPTRG00000009699	TNRC6C	100	98.841	ENSCSAG00000005167	TNRC6C	100	98.353	Chlorocebus_sabaeus
ENSPTRG00000009699	TNRC6C	75	92.051	ENSCHOG00000000088	TNRC6C	72	91.172	Choloepus_hoffmanni
ENSPTRG00000009699	TNRC6C	100	87.891	ENSCPBG00000027960	TNRC6C	100	87.891	Chrysemys_picta_bellii
ENSPTRG00000009699	TNRC6C	100	98.559	ENSCANG00000041771	TNRC6C	100	98.559	Colobus_angolensis_palliatus
ENSPTRG00000009699	TNRC6C	100	89.511	ENSCGRG00001022686	Tnrc6c	100	88.391	Cricetulus_griseus_chok1gshd
ENSPTRG00000009699	TNRC6C	100	89.935	ENSCGRG00000018041	Tnrc6c	100	88.391	Cricetulus_griseus_crigri
ENSPTRG00000009699	TNRC6C	93	51.249	ENSCSEG00000012744	tnrc6c1	98	45.937	Cynoglossus_semilaevis
ENSPTRG00000009699	TNRC6C	100	54.535	ENSDARG00000076847	tnrc6c1	99	54.571	Danio_rerio
ENSPTRG00000009699	TNRC6C	100	91.324	ENSDNOG00000003247	TNRC6C	99	89.293	Dasypus_novemcinctus
ENSPTRG00000009699	TNRC6C	100	85.933	ENSDORG00000004558	Tnrc6c	100	85.815	Dipodomys_ordii
ENSPTRG00000009699	TNRC6C	90	83.217	ENSETEG00000005527	TNRC6C	86	83.803	Echinops_telfairi
ENSPTRG00000009699	TNRC6C	100	91.302	ENSEASG00005004799	TNRC6C	100	91.361	Equus_asinus_asinus
ENSPTRG00000009699	TNRC6C	100	91.425	ENSECAG00000012486	TNRC6C	99	90.762	Equus_caballus
ENSPTRG00000009699	TNRC6C	96	91.312	ENSEEUG00000010008	TNRC6C	96	91.878	Erinaceus_europaeus
ENSPTRG00000009699	TNRC6C	100	89.427	ENSFCAG00000028358	TNRC6C	100	89.368	Felis_catus
ENSPTRG00000009699	TNRC6C	100	86.897	ENSFALG00000000848	TNRC6C	100	86.217	Ficedula_albicollis
ENSPTRG00000009699	TNRC6C	100	91.356	ENSFDAG00000010368	TNRC6C	100	89.680	Fukomys_damarensis
ENSPTRG00000009699	TNRC6C	89	71.005	ENSFHEG00000002936	tnrc6c1	99	45.863	Fundulus_heteroclitus
ENSPTRG00000009699	TNRC6C	100	88.876	ENSGALG00000001725	TNRC6C	100	88.402	Gallus_gallus
ENSPTRG00000009699	TNRC6C	100	48.840	ENSGAFG00000019019	tnrc6c1	100	48.923	Gambusia_affinis
ENSPTRG00000009699	TNRC6C	95	52.599	ENSGACG00000012320	tnrc6c1	97	47.940	Gasterosteus_aculeatus
ENSPTRG00000009699	TNRC6C	100	87.514	ENSGAGG00000022043	TNRC6C	99	87.321	Gopherus_agassizii
ENSPTRG00000009699	TNRC6C	100	99.074	ENSGGOG00000011304	TNRC6C	100	99.074	Gorilla_gorilla
ENSPTRG00000009699	TNRC6C	100	47.677	ENSHBUG00000010846	tnrc6c1	98	53.474	Haplochromis_burtoni
ENSPTRG00000009699	TNRC6C	100	92.422	ENSHGLG00000004809	TNRC6C	99	89.745	Heterocephalus_glaber_female
ENSPTRG00000009699	TNRC6C	100	91.397	ENSHGLG00100012597	TNRC6C	99	89.901	Heterocephalus_glaber_male
ENSPTRG00000009699	TNRC6C	99	50.713	ENSIPUG00000000818	tnrc6c1	98	51.404	Ictalurus_punctatus
ENSPTRG00000009699	TNRC6C	100	91.248	ENSSTOG00000009101	TNRC6C	100	88.908	Ictidomys_tridecemlineatus
ENSPTRG00000009699	TNRC6C	100	88.627	ENSJJAG00000017055	Tnrc6c	99	86.889	Jaculus_jaculus
ENSPTRG00000009699	TNRC6C	99	48.012	ENSKMAG00000021023	tnrc6c1	100	50.576	Kryptolebias_marmoratus
ENSPTRG00000009699	TNRC6C	100	75.660	ENSLACG00000015283	TNRC6C	100	74.305	Latimeria_chalumnae
ENSPTRG00000009699	TNRC6C	99	56.529	ENSLOCG00000013377	tnrc6c1	99	55.447	Lepisosteus_oculatus
ENSPTRG00000009699	TNRC6C	100	90.748	ENSLAFG00000011122	TNRC6C	99	89.115	Loxodonta_africana
ENSPTRG00000009699	TNRC6C	100	99.014	ENSMFAG00000043943	TNRC6C	100	99.014	Macaca_fascicularis
ENSPTRG00000009699	TNRC6C	100	99.014	ENSMMUG00000011924	TNRC6C	100	98.934	Macaca_mulatta
ENSPTRG00000009699	TNRC6C	100	98.919	ENSMNEG00000030405	TNRC6C	100	98.919	Macaca_nemestrina
ENSPTRG00000009699	TNRC6C	100	98.957	ENSMLEG00000033436	TNRC6C	100	98.957	Mandrillus_leucophaeus
ENSPTRG00000009699	TNRC6C	94	54.798	ENSMAMG00000023613	tnrc6c1	100	51.341	Mastacembelus_armatus
ENSPTRG00000009699	TNRC6C	98	50.297	ENSMZEG00005010920	tnrc6c1	98	53.243	Maylandia_zebra
ENSPTRG00000009699	TNRC6C	100	80.069	ENSMGAG00000003906	TNRC6C	100	80.662	Meleagris_gallopavo
ENSPTRG00000009699	TNRC6C	100	89.393	ENSMAUG00000021618	Tnrc6c	100	89.334	Mesocricetus_auratus
ENSPTRG00000009699	TNRC6C	100	94.377	ENSMICG00000003952	TNRC6C	100	94.261	Microcebus_murinus
ENSPTRG00000009699	TNRC6C	100	91.533	ENSMOCG00000015879	Tnrc6c	100	89.063	Microtus_ochrogaster
ENSPTRG00000009699	TNRC6C	93	55.724	ENSMMOG00000005203	tnrc6c1	100	50.678	Mola_mola
ENSPTRG00000009699	TNRC6C	100	86.941	ENSMODG00000001785	TNRC6C	99	85.127	Monodelphis_domestica
ENSPTRG00000009699	TNRC6C	100	91.119	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	88.671	Mus_caroli
ENSPTRG00000009699	TNRC6C	100	90.882	ENSMUSG00000025571	Tnrc6c	100	88.446	Mus_musculus
ENSPTRG00000009699	TNRC6C	100	90.941	MGP_PahariEiJ_G0018593	Tnrc6c	100	88.503	Mus_pahari
ENSPTRG00000009699	TNRC6C	100	90.941	MGP_SPRETEiJ_G0018309	Tnrc6c	100	88.503	Mus_spretus
ENSPTRG00000009699	TNRC6C	100	88.998	ENSMPUG00000013348	TNRC6C	98	88.710	Mustela_putorius_furo
ENSPTRG00000009699	TNRC6C	100	82.296	ENSMLUG00000014431	TNRC6C	98	82.099	Myotis_lucifugus
ENSPTRG00000009699	TNRC6C	100	90.631	ENSNGAG00000012203	Tnrc6c	99	89.167	Nannospalax_galili
ENSPTRG00000009699	TNRC6C	93	53.288	ENSNBRG00000005344	tnrc6c1	98	54.229	Neolamprologus_brichardi
ENSPTRG00000009699	TNRC6C	100	95.903	ENSNLEG00000000047	TNRC6C	99	96.654	Nomascus_leucogenys
ENSPTRG00000009699	TNRC6C	97	81.636	ENSMEUG00000005104	TNRC6C	99	89.583	Notamacropus_eugenii
ENSPTRG00000009699	TNRC6C	100	91.829	ENSODEG00000012499	TNRC6C	100	92.007	Octodon_degus
ENSPTRG00000009699	TNRC6C	94	51.338	ENSONIG00000002210	tnrc6c1	100	51.081	Oreochromis_niloticus
ENSPTRG00000009699	TNRC6C	99	63.472	ENSOANG00000009758	-	100	61.143	Ornithorhynchus_anatinus
ENSPTRG00000009699	TNRC6C	84	80.305	ENSOCUG00000006122	TNRC6C	95	78.278	Oryctolagus_cuniculus
ENSPTRG00000009699	TNRC6C	91	50.399	ENSORLG00000009837	tnrc6c1	100	66.914	Oryzias_latipes
ENSPTRG00000009699	TNRC6C	92	50.330	ENSORLG00020016510	tnrc6c1	100	49.196	Oryzias_latipes_hni
ENSPTRG00000009699	TNRC6C	72	45.576	ENSORLG00015000171	tnrc6c1	98	44.744	Oryzias_latipes_hsok
ENSPTRG00000009699	TNRC6C	92	50.689	ENSOMEG00000000357	tnrc6c1	99	48.021	Oryzias_melastigma
ENSPTRG00000009699	TNRC6C	100	92.986	ENSOGAG00000007197	TNRC6C	100	92.986	Otolemur_garnettii
ENSPTRG00000009699	TNRC6C	96	84.806	ENSOARG00000006041	TNRC6C	97	85.052	Ovis_aries
ENSPTRG00000009699	TNRC6C	100	99.896	ENSPPAG00000027160	TNRC6C	100	99.884	Pan_paniscus
ENSPTRG00000009699	TNRC6C	100	89.427	ENSPPRG00000018881	TNRC6C	100	89.368	Panthera_pardus
ENSPTRG00000009699	TNRC6C	90	86.463	ENSPTIG00000008791	TNRC6C	68	96.429	Panthera_tigris_altaica
ENSPTRG00000009699	TNRC6C	100	98.919	ENSPANG00000019994	TNRC6C	100	98.919	Papio_anubis
ENSPTRG00000009699	TNRC6C	96	52.894	ENSPKIG00000005428	tnrc6c1	100	51.688	Paramormyrops_kingsleyae
ENSPTRG00000009699	TNRC6C	100	86.339	ENSPSIG00000018069	TNRC6C	100	84.004	Pelodiscus_sinensis
ENSPTRG00000009699	TNRC6C	74	57.717	ENSPMGG00000022911	tnrc6c1	97	63.265	Periophthalmus_magnuspinnatus
ENSPTRG00000009699	TNRC6C	100	90.748	ENSPEMG00000009785	Tnrc6c	100	88.332	Peromyscus_maniculatus_bairdii
ENSPTRG00000009699	TNRC6C	58	85.949	ENSPCIG00000017421	-	99	85.802	Phascolarctos_cinereus
ENSPTRG00000009699	TNRC6C	100	48.515	ENSPFOG00000012560	tnrc6c1	97	57.307	Poecilia_formosa
ENSPTRG00000009699	TNRC6C	100	49.692	ENSPLAG00000021055	tnrc6c1	100	49.719	Poecilia_latipinna
ENSPTRG00000009699	TNRC6C	100	99.420	ENSPPYG00000008679	TNRC6C	99	99.074	Pongo_abelii
ENSPTRG00000009699	TNRC6C	93	92.654	ENSPCAG00000012510	TNRC6C	91	92.654	Procavia_capensis
ENSPTRG00000009699	TNRC6C	100	94.841	ENSPCOG00000021451	TNRC6C	100	94.841	Propithecus_coquereli
ENSPTRG00000009699	TNRC6C	96	88.983	ENSPVAG00000002008	TNRC6C	95	88.983	Pteropus_vampyrus
ENSPTRG00000009699	TNRC6C	100	47.517	ENSPNYG00000014477	tnrc6c1	98	52.945	Pundamilia_nyererei
ENSPTRG00000009699	TNRC6C	100	90.302	ENSRNOG00000022395	Tnrc6c	100	90.302	Rattus_norvegicus
ENSPTRG00000009699	TNRC6C	100	98.899	ENSRBIG00000027777	TNRC6C	100	98.899	Rhinopithecus_bieti
ENSPTRG00000009699	TNRC6C	100	98.957	ENSRROG00000042912	TNRC6C	100	98.957	Rhinopithecus_roxellana
ENSPTRG00000009699	TNRC6C	100	97.787	ENSSBOG00000023981	TNRC6C	100	97.787	Saimiri_boliviensis_boliviensis
ENSPTRG00000009699	TNRC6C	54	90.270	ENSSHAG00000018330	-	100	89.622	Sarcophilus_harrisii
ENSPTRG00000009699	TNRC6C	91	57.851	ENSSFOG00015006475	tnrc6c1	99	51.902	Scleropages_formosus
ENSPTRG00000009699	TNRC6C	76	56.394	ENSSFOG00015004735	-	99	61.257	Scleropages_formosus
ENSPTRG00000009699	TNRC6C	100	48.918	ENSSMAG00000012761	tnrc6c1	99	50.517	Scophthalmus_maximus
ENSPTRG00000009699	TNRC6C	100	50.656	ENSSDUG00000002366	tnrc6c1	99	49.631	Seriola_dumerili
ENSPTRG00000009699	TNRC6C	100	48.862	ENSSLDG00000025613	tnrc6c1	100	49.917	Seriola_lalandi_dorsalis
ENSPTRG00000009699	TNRC6C	91	90.086	ENSSARG00000006816	TNRC6C	91	88.235	Sorex_araneus
ENSPTRG00000009699	TNRC6C	83	86.597	ENSSPUG00000007341	TNRC6C	98	86.667	Sphenodon_punctatus
ENSPTRG00000009699	TNRC6C	79	53.783	ENSSPAG00000014977	tnrc6c1	97	48.807	Stegastes_partitus
ENSPTRG00000009699	TNRC6C	97	90.951	ENSSSCG00000034373	TNRC6C	100	87.987	Sus_scrofa
ENSPTRG00000009699	TNRC6C	100	88.291	ENSTGUG00000007733	TNRC6C	100	85.962	Taeniopygia_guttata
ENSPTRG00000009699	TNRC6C	87	54.743	ENSTRUG00000011685	tnrc6c1	100	49.585	Takifugu_rubripes
ENSPTRG00000009699	TNRC6C	89	52.764	ENSTNIG00000005273	tnrc6c1	100	60.844	Tetraodon_nigroviridis
ENSPTRG00000009699	TNRC6C	64	89.844	ENSTBEG00000005046	TNRC6C	100	82.322	Tupaia_belangeri
ENSPTRG00000009699	TNRC6C	100	91.130	ENSTTRG00000010828	TNRC6C	97	91.189	Tursiops_truncatus
ENSPTRG00000009699	TNRC6C	100	89.657	ENSUMAG00000013614	TNRC6C	99	89.808	Ursus_maritimus
ENSPTRG00000009699	TNRC6C	52	81.207	ENSVPAG00000006765	-	99	81.214	Vicugna_pacos
ENSPTRG00000009699	TNRC6C	100	91.839	ENSVVUG00000015268	TNRC6C	100	91.839	Vulpes_vulpes
ENSPTRG00000009699	TNRC6C	100	75.264	ENSXETG00000019470	tnrc6c	100	74.618	Xenopus_tropicalis
ENSPTRG00000009699	TNRC6C	100	49.857	ENSXMAG00000025971	tnrc6c1	100	48.840	Xiphophorus_maculatus