EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTRG00000009727 (Gene tree)
Gene ID
454933
Gene Symbol
RBFOX3
Alias
-
Full Name
RNA binding fox-1 homolog 3
Gene Type
protein_coding
Species
Pan_troglodytes
Status
putative
Strand
Minus strand
Length
62517 bases
Position
chr17:78701702-78764218
Accession
12643
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTRP00000016544Fox-1_CPF12414.87.1e-4511
ENSPTRP00000093937Fox-1_CPF12414.87.8e-4111
ENSPTRP00000084525Fox-1_CPF12414.81.1e-4011
ENSPTRP00000016544RRM_1PF00076.229.2e-1911
ENSPTRP00000093937RRM_1PF00076.221.3e-1811
ENSPTRP00000084525RRM_1PF00076.220.0001311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTRT00000109193-1862XM_009433414ENSPTRP00000093937373 (aa)XP_009431689A0A2I3TXS3
ENSPTRT00000087665-1026-ENSPTRP00000084525341 (aa)-A0A2I3T5L7
ENSPTRT00000017856-2513XM_001159532ENSPTRP00000016544312 (aa)XP_001159532H2QE03
Gene Model
Click here to download ENSPTRG00000009727's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000009727's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTRG00000009727RBFOX310077.143ENSPTRG00000007744RBFOX17978.333
ENSPTRG00000009727RBFOX39661.404ENSPTRG00000014305RBFOX28759.238
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTRG00000009727RBFOX3100100.000ENSG00000167281RBFOX3100100.000Homo_sapiens
ENSPTRG00000009727RBFOX310082.803ENSAPOG00000021630rbfox3b8180.000Acanthochromis_polyacanthus
ENSPTRG00000009727RBFOX37789.583ENSAPOG00000015658-8093.103Acanthochromis_polyacanthus
ENSPTRG00000009727RBFOX310092.424ENSAMEG00000014170RBFOX38492.424Ailuropoda_melanoleuca
ENSPTRG00000009727RBFOX39569.085ENSACIG00000003768-7273.282Amphilophus_citrinellus
ENSPTRG00000009727RBFOX310078.344ENSACIG00000010817rbfox3b9475.333Amphilophus_citrinellus
ENSPTRG00000009727RBFOX310082.803ENSAOCG00000012358rbfox3b8180.000Amphiprion_ocellaris
ENSPTRG00000009727RBFOX39576.412ENSAOCG00000010786-7193.333Amphiprion_ocellaris
ENSPTRG00000009727RBFOX310073.248ENSAPEG00000019081rbfox3b7493.333Amphiprion_percula
ENSPTRG00000009727RBFOX37689.583ENSAPEG00000015891-7193.103Amphiprion_percula
ENSPTRG00000009727RBFOX310073.256ENSATEG00000019945rbfox3b9573.030Anabas_testudineus
ENSPTRG00000009727RBFOX39577.483ENSATEG00000023101-9276.490Anabas_testudineus
ENSPTRG00000009727RBFOX310090.764ENSACAG00000016093RBFOX38391.639Anolis_carolinensis
ENSPTRG00000009727RBFOX310098.397ENSANAG00000023457RBFOX310098.397Aotus_nancymaae
ENSPTRG00000009727RBFOX310080.696ENSACLG00000025552-8181.395Astatotilapia_calliptera
ENSPTRG00000009727RBFOX310082.166ENSACLG00000020011rbfox3b9582.000Astatotilapia_calliptera
ENSPTRG00000009727RBFOX39580.858ENSAMXG00000037246rbfox3a9083.168Astyanax_mexicanus
ENSPTRG00000009727RBFOX310076.825ENSAMXG00000042841rbfox3b8574.000Astyanax_mexicanus
ENSPTRG00000009727RBFOX39697.561ENSBTAG00000006280RBFOX310097.561Bos_taurus
ENSPTRG00000009727RBFOX39698.476ENSCJAG00000009563RBFOX310098.476Callithrix_jacchus
ENSPTRG00000009727RBFOX37699.160ENSCAFG00000005547RBFOX38599.160Canis_familiaris
ENSPTRG00000009727RBFOX310098.928ENSCAFG00020008126RBFOX310098.928Canis_lupus_dingo
ENSPTRG00000009727RBFOX310097.587ENSCHIG00000009124RBFOX310097.587Capra_hircus
ENSPTRG00000009727RBFOX39699.088ENSTSYG00000029617RBFOX310099.088Carlito_syrichta
ENSPTRG00000009727RBFOX35496.450ENSCAPG00000010217RBFOX310096.450Cavia_aperea
ENSPTRG00000009727RBFOX310097.340ENSCPOG00000021703RBFOX310097.340Cavia_porcellus
ENSPTRG00000009727RBFOX310098.397ENSCCAG00000028450RBFOX310098.476Cebus_capucinus
ENSPTRG00000009727RBFOX310099.679ENSCATG00000018349RBFOX310099.679Cercocebus_atys
ENSPTRG00000009727RBFOX310098.396ENSCLAG00000006449RBFOX310098.396Chinchilla_lanigera
ENSPTRG00000009727RBFOX310099.679ENSCSAG00000002355RBFOX310099.679Chlorocebus_sabaeus
ENSPTRG00000009727RBFOX39588.889ENSCPBG00000010904RBFOX39588.889Chrysemys_picta_bellii
ENSPTRG00000009727RBFOX310099.732ENSCANG00000043120RBFOX310099.732Colobus_angolensis_palliatus
ENSPTRG00000009727RBFOX310096.533ENSCGRG00001019476Rbfox310096.533Cricetulus_griseus_chok1gshd
ENSPTRG00000009727RBFOX310096.533ENSCGRG00000003268Rbfox310096.533Cricetulus_griseus_crigri
ENSPTRG00000009727RBFOX310077.848ENSCSEG00000015567RBFOX37293.333Cynoglossus_semilaevis
ENSPTRG00000009727RBFOX310066.562ENSCSEG00000020606RBFOX38367.133Cynoglossus_semilaevis
ENSPTRG00000009727RBFOX310082.803ENSCVAG00000006882rbfox3b8180.000Cyprinodon_variegatus
ENSPTRG00000009727RBFOX39579.868ENSDARG00000010083rbfox3a9481.230Danio_rerio
ENSPTRG00000009727RBFOX310072.843ENSDARG00000074310rbfox3b9673.094Danio_rerio
ENSPTRG00000009727RBFOX38287.541ENSDNOG00000039391RBFOX38584.688Dasypus_novemcinctus
ENSPTRG00000009727RBFOX39686.034ENSDORG00000005352Rbfox39683.799Dipodomys_ordii
ENSPTRG00000009727RBFOX38561.818ENSEBUG00000013559RBFOX37163.281Eptatretus_burgeri
ENSPTRG00000009727RBFOX310071.037ENSEBUG00000002129RBFOX38871.885Eptatretus_burgeri
ENSPTRG00000009727RBFOX310097.771ENSEASG00005005059RBFOX310097.771Equus_asinus_asinus
ENSPTRG00000009727RBFOX310097.452ENSECAG00000023811RBFOX310097.452Equus_caballus
ENSPTRG00000009727RBFOX39882.192ENSEEUG00000013974RBFOX39882.740Erinaceus_europaeus
ENSPTRG00000009727RBFOX310081.905ENSELUG00000017963rbfox3b9569.000Esox_lucius
ENSPTRG00000009727RBFOX310097.115ENSFCAG00000002555RBFOX310097.115Felis_catus
ENSPTRG00000009727RBFOX39575.684ENSFALG00000012288RBFOX38175.684Ficedula_albicollis
ENSPTRG00000009727RBFOX310093.085ENSFDAG00000007489RBFOX310093.085Fukomys_damarensis
ENSPTRG00000009727RBFOX310073.248ENSFHEG00000008550rbfox3b9570.000Fundulus_heteroclitus
ENSPTRG00000009727RBFOX310063.926ENSGMOG00000019304-9966.667Gadus_morhua
ENSPTRG00000009727RBFOX39594.613ENSGALG00000032889RBFOX38394.613Gallus_gallus
ENSPTRG00000009727RBFOX39780.719ENSGAFG00000005025rbfox3b8680.000Gambusia_affinis
ENSPTRG00000009727RBFOX39671.978ENSGACG00000002138-9672.527Gasterosteus_aculeatus
ENSPTRG00000009727RBFOX39588.889ENSGAGG00000020025RBFOX39588.889Gopherus_agassizii
ENSPTRG00000009727RBFOX3100100.000ENSGGOG00000012546RBFOX3100100.000Gorilla_gorilla
ENSPTRG00000009727RBFOX310080.380ENSHBUG00000023098-8681.063Haplochromis_burtoni
ENSPTRG00000009727RBFOX310082.166ENSHBUG00000018099rbfox3b8179.667Haplochromis_burtoni
ENSPTRG00000009727RBFOX310096.825ENSHGLG00000008679RBFOX310096.825Heterocephalus_glaber_female
ENSPTRG00000009727RBFOX39892.683ENSHGLG00100014739RBFOX39891.057Heterocephalus_glaber_male
ENSPTRG00000009727RBFOX310070.253ENSHCOG00000001863RBFOX38190.000Hippocampus_comes
ENSPTRG00000009727RBFOX39676.589ENSHCOG00000007444RBFOX37676.768Hippocampus_comes
ENSPTRG00000009727RBFOX310065.988ENSIPUG00000021966rbfox3b8875.949Ictalurus_punctatus
ENSPTRG00000009727RBFOX39579.208ENSIPUG00000012010rbfox3a9081.518Ictalurus_punctatus
ENSPTRG00000009727RBFOX39896.721ENSSTOG00000026817RBFOX310097.297Ictidomys_tridecemlineatus
ENSPTRG00000009727RBFOX310098.391ENSJJAG00000014167Rbfox310098.391Jaculus_jaculus
ENSPTRG00000009727RBFOX310082.803ENSKMAG00000006726rbfox3b8180.000Kryptolebias_marmoratus
ENSPTRG00000009727RBFOX39583.056ENSLBEG00000022508-8182.392Labrus_bergylta
ENSPTRG00000009727RBFOX310082.484ENSLBEG00000004030rbfox3b9475.000Labrus_bergylta
ENSPTRG00000009727RBFOX39576.074ENSLACG00000018409-8378.221Latimeria_chalumnae
ENSPTRG00000009727RBFOX39584.718ENSLOCG00000012267rbfox3a9087.043Lepisosteus_oculatus
ENSPTRG00000009727RBFOX310096.257ENSLAFG00000016623RBFOX310096.257Loxodonta_africana
ENSPTRG00000009727RBFOX39699.443ENSMFAG00000002247RBFOX310099.443Macaca_fascicularis
ENSPTRG00000009727RBFOX310099.679ENSMMUG00000023028RBFOX310099.695Macaca_mulatta
ENSPTRG00000009727RBFOX310099.359ENSMNEG00000041147RBFOX310099.359Macaca_nemestrina
ENSPTRG00000009727RBFOX310099.679ENSMLEG00000025686RBFOX310099.679Mandrillus_leucophaeus
ENSPTRG00000009727RBFOX310077.885ENSMAMG00000019810rbfox3b9474.747Mastacembelus_armatus
ENSPTRG00000009727RBFOX39576.080ENSMAMG00000020600-8573.355Mastacembelus_armatus
ENSPTRG00000009727RBFOX310082.166ENSMZEG00005000781rbfox3b8179.667Maylandia_zebra
ENSPTRG00000009727RBFOX39558.485ENSMZEG00005003055-5989.630Maylandia_zebra
ENSPTRG00000009727RBFOX36292.188ENSMGAG00000005600RBFOX37392.188Meleagris_gallopavo
ENSPTRG00000009727RBFOX310096.000ENSMAUG00000013543Rbfox310096.000Mesocricetus_auratus
ENSPTRG00000009727RBFOX310097.587ENSMICG00000014898RBFOX310097.587Microcebus_murinus
ENSPTRG00000009727RBFOX310096.524ENSMOCG00000015373Rbfox310096.524Microtus_ochrogaster
ENSPTRG00000009727RBFOX310080.251ENSMMOG00000020193rbfox3b8179.470Mola_mola
ENSPTRG00000009727RBFOX39593.939ENSMODG00000002089RBFOX38393.939Monodelphis_domestica
ENSPTRG00000009727RBFOX310081.013ENSMALG00000018270-8690.000Monopterus_albus
ENSPTRG00000009727RBFOX310081.847ENSMALG00000020407rbfox3b8179.000Monopterus_albus
ENSPTRG00000009727RBFOX310097.059MGP_CAROLIEiJ_G0017487Rbfox310097.633Mus_caroli
ENSPTRG00000009727RBFOX310097.059ENSMUSG00000025576Rbfox310097.241Mus_musculus
ENSPTRG00000009727RBFOX310097.333MGP_PahariEiJ_G0018614Rbfox310097.931Mus_pahari
ENSPTRG00000009727RBFOX310097.326MGP_SPRETEiJ_G0018331Rbfox310097.633Mus_spretus
ENSPTRG00000009727RBFOX310087.966ENSMPUG00000012319RBFOX39187.966Mustela_putorius_furo
ENSPTRG00000009727RBFOX310097.326ENSNGAG00000018006Rbfox310097.326Nannospalax_galili
ENSPTRG00000009727RBFOX310073.482ENSNBRG00000022885-7890.625Neolamprologus_brichardi
ENSPTRG00000009727RBFOX310080.892ENSNBRG00000010102rbfox3b7492.857Neolamprologus_brichardi
ENSPTRG00000009727RBFOX310069.745ENSNLEG00000000153-8497.500Nomascus_leucogenys
ENSPTRG00000009727RBFOX39266.860ENSMEUG00000004218-7596.552Notamacropus_eugenii
ENSPTRG00000009727RBFOX37696.629ENSOPRG00000016279-7596.629Ochotona_princeps
ENSPTRG00000009727RBFOX310098.396ENSODEG00000009433RBFOX310098.396Octodon_degus
ENSPTRG00000009727RBFOX310082.803ENSONIG00000009549rbfox3b9675.207Oreochromis_niloticus
ENSPTRG00000009727RBFOX310081.329ENSONIG00000007282-8782.060Oreochromis_niloticus
ENSPTRG00000009727RBFOX37683.158ENSOCUG00000014217RBFOX37880.702Oryctolagus_cuniculus
ENSPTRG00000009727RBFOX310082.540ENSORLG00000000905rbfox3b6479.667Oryzias_latipes
ENSPTRG00000009727RBFOX310082.540ENSORLG00020018030rbfox3b8179.667Oryzias_latipes_hni
ENSPTRG00000009727RBFOX310082.222ENSORLG00015009200rbfox3b8593.333Oryzias_latipes_hsok
ENSPTRG00000009727RBFOX37775.969ENSOMEG00000014677rbfox3b7676.995Oryzias_melastigma
ENSPTRG00000009727RBFOX310097.115ENSOGAG00000029595RBFOX38497.115Otolemur_garnettii
ENSPTRG00000009727RBFOX364100.000ENSOARG00000002908RBFOX38169.745Ovis_aries
ENSPTRG00000009727RBFOX391100.000ENSPPAG00000025383RBFOX399100.000Pan_paniscus
ENSPTRG00000009727RBFOX39694.986ENSPPRG00000007819RBFOX310094.986Panthera_pardus
ENSPTRG00000009727RBFOX310099.679ENSPANG00000019837RBFOX310099.679Papio_anubis
ENSPTRG00000009727RBFOX39585.050ENSPKIG00000010299rbfox3a7384.314Paramormyrops_kingsleyae
ENSPTRG00000009727RBFOX310069.010ENSPKIG00000022633-8066.107Paramormyrops_kingsleyae
ENSPTRG00000009727RBFOX38582.090ENSPMGG00000008000rbfox3b7781.818Periophthalmus_magnuspinnatus
ENSPTRG00000009727RBFOX310096.791ENSPEMG00000010500Rbfox310096.791Peromyscus_maniculatus_bairdii
ENSPTRG00000009727RBFOX35674.737ENSPMAG00000008689rbfox3b9376.842Petromyzon_marinus
ENSPTRG00000009727RBFOX39691.877ENSPCIG00000005766RBFOX39694.477Phascolarctos_cinereus
ENSPTRG00000009727RBFOX310082.803ENSPFOG00000018294rbfox3b9268.966Poecilia_formosa
ENSPTRG00000009727RBFOX37780.738ENSPLAG00000000481rbfox3b7193.023Poecilia_latipinna
ENSPTRG00000009727RBFOX310073.248ENSPMEG00000022997rbfox3b9570.000Poecilia_mexicana
ENSPTRG00000009727RBFOX310083.175ENSPREG00000012886rbfox3b8680.333Poecilia_reticulata
ENSPTRG00000009727RBFOX39193.684ENSPPYG00000008704RBFOX38493.684Pongo_abelii
ENSPTRG00000009727RBFOX39290.725ENSPCAG00000001401RBFOX39692.754Procavia_capensis
ENSPTRG00000009727RBFOX39897.605ENSPCOG00000012689RBFOX310097.772Propithecus_coquereli
ENSPTRG00000009727RBFOX39285.838ENSPVAG00000015243RBFOX39686.705Pteropus_vampyrus
ENSPTRG00000009727RBFOX310070.570ENSPNYG00000010414rbfox3b7492.857Pundamilia_nyererei
ENSPTRG00000009727RBFOX310074.204ENSPNYG00000009079-7193.333Pundamilia_nyererei
ENSPTRG00000009727RBFOX38184.314ENSPNAG00000018173rbfox3b8372.449Pygocentrus_nattereri
ENSPTRG00000009727RBFOX39580.528ENSPNAG00000002889rbfox3a8182.838Pygocentrus_nattereri
ENSPTRG00000009727RBFOX310097.333ENSRNOG00000003386Rbfox310097.333Rattus_norvegicus
ENSPTRG00000009727RBFOX310099.679ENSRBIG00000040449RBFOX38799.679Rhinopithecus_bieti
ENSPTRG00000009727RBFOX310099.679ENSRROG00000000766RBFOX310099.679Rhinopithecus_roxellana
ENSPTRG00000009727RBFOX310098.660ENSSBOG00000031591RBFOX310098.660Saimiri_boliviensis_boliviensis
ENSPTRG00000009727RBFOX39584.498ENSSHAG00000016076RBFOX39583.502Sarcophilus_harrisii
ENSPTRG00000009727RBFOX39583.389ENSSFOG00015023260rbfox3a8185.714Scleropages_formosus
ENSPTRG00000009727RBFOX39668.667ENSSFOG00015004716RBFOX38468.896Scleropages_formosus
ENSPTRG00000009727RBFOX310078.248ENSSMAG00000012618rbfox3b7176.266Scophthalmus_maximus
ENSPTRG00000009727RBFOX310080.442ENSSMAG00000019052-9579.801Scophthalmus_maximus
ENSPTRG00000009727RBFOX310073.248ENSSDUG00000023183rbfox3b9570.000Seriola_dumerili
ENSPTRG00000009727RBFOX39576.000ENSSDUG00000015801-7693.333Seriola_dumerili
ENSPTRG00000009727RBFOX310082.803ENSSLDG00000000149rbfox3b8180.000Seriola_lalandi_dorsalis
ENSPTRG00000009727RBFOX39577.076ENSSLDG00000016098-7493.333Seriola_lalandi_dorsalis
ENSPTRG00000009727RBFOX39589.632ENSSPUG00000011733RBFOX39589.632Sphenodon_punctatus
ENSPTRG00000009727RBFOX38774.453ENSSPAG00000004898-7573.725Stegastes_partitus
ENSPTRG00000009727RBFOX310073.248ENSSPAG00000017571rbfox3b7970.000Stegastes_partitus
ENSPTRG00000009727RBFOX38897.576ENSSSCG00000039498RBFOX310097.576Sus_scrofa
ENSPTRG00000009727RBFOX310077.848ENSTRUG00000004894rbfox3b8675.974Takifugu_rubripes
ENSPTRG00000009727RBFOX310073.775ENSTNIG00000011278rbfox3b8271.687Tetraodon_nigroviridis
ENSPTRG00000009727RBFOX39663.966ENSTBEG00000004296-8969.578Tupaia_belangeri
ENSPTRG00000009727RBFOX39291.860ENSTTRG00000003676RBFOX39691.860Tursiops_truncatus
ENSPTRG00000009727RBFOX310097.756ENSUAMG00000004668RBFOX310097.756Ursus_americanus
ENSPTRG00000009727RBFOX310098.718ENSVVUG00000017864RBFOX310098.718Vulpes_vulpes
ENSPTRG00000009727RBFOX310066.766ENSXETG00000020236rbfox39158.763Xenopus_tropicalis
ENSPTRG00000009727RBFOX310081.270ENSXCOG00000018262rbfox3b8588.462Xiphophorus_couchianus
ENSPTRG00000009727RBFOX310082.803ENSXMAG00000012939rbfox3b8180.000Xiphophorus_maculatus

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