EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000010021 (Gene tree)
Gene ID: 455418
Gene Symbol: MBD1
Alias: -
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 14446 bases
Position: chr18:47568140-47582585
Accession: 5182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000062286	MBD	PF01429.19	4.1e-16	1	1
ENSPTRP00000069439	MBD	PF01429.19	4.5e-16	1	1
ENSPTRP00000075624	MBD	PF01429.19	4.7e-16	1	1
ENSPTRP00000071781	MBD	PF01429.19	4.8e-16	1	1
ENSPTRP00000017032	MBD	PF01429.19	4.8e-16	1	1
ENSPTRP00000080553	MBD	PF01429.19	4.8e-16	1	1
ENSPTRP00000074772	MBD	PF01429.19	5e-16	1	1
ENSPTRP00000091374	MBD	PF01429.19	5.4e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000110927	-	1761	XM_009434011	ENSPTRP00000080553	586 (aa)	XP_009432286	A0A2J8NE77
ENSPTRT00000080289	-	1821	XM_003315902	ENSPTRP00000074772	606 (aa)	XP_003315950	A0A2I3SE50
ENSPTRT00000097315	-	5221	XM_009433989	ENSPTRP00000069439	630 (aa)	XP_009432264	A0A2J8NE99
ENSPTRT00000018388	-	1704	XM_016933701	ENSPTRP00000017032	567 (aa)	XP_016789190	H2QEI9
ENSPTRT00000095888	-	1653	-	ENSPTRP00000075624	550 (aa)	-	A0A2I3SF16
ENSPTRT00000107797	-	5146	XM_009433996	ENSPTRP00000091374	605 (aa)	XP_009432271	K7CVL7
ENSPTRT00000088256	-	5053	XM_003315905	ENSPTRP00000062286	574 (aa)	XP_003315953	G2HHI2
ENSPTRT00000076939	-	5008	XM_009434012	ENSPTRP00000071781	559 (aa)	XP_009432287	A0A2I3S4M1

Gene Model

Click here to download ENSPTRG00000010021's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000010021's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000010021	MBD1	100	99.841	ENSG00000141644	MBD1	100	99.841	Homo_sapiens
ENSPTRG00000010021	MBD1	100	87.500	ENSAMEG00000000238	MBD1	96	86.867	Ailuropoda_melanoleuca
ENSPTRG00000010021	MBD1	69	45.455	ENSACAG00000006091	-	100	45.521	Anolis_carolinensis
ENSPTRG00000010021	MBD1	100	96.349	ENSANAG00000036253	MBD1	100	96.349	Aotus_nancymaae
ENSPTRG00000010021	MBD1	100	86.212	ENSBTAG00000003801	MBD1	100	86.371	Bos_taurus
ENSPTRG00000010021	MBD1	100	96.246	ENSCJAG00000004959	MBD1	100	96.246	Callithrix_jacchus
ENSPTRG00000010021	MBD1	100	86.846	ENSCAFG00000018928	MBD1	96	87.639	Canis_familiaris
ENSPTRG00000010021	MBD1	99	86.035	ENSCAFG00020024272	MBD1	97	86.838	Canis_lupus_dingo
ENSPTRG00000010021	MBD1	100	86.212	ENSCHIG00000021134	MBD1	100	86.371	Capra_hircus
ENSPTRG00000010021	MBD1	100	90.952	ENSTSYG00000000509	MBD1	100	90.952	Carlito_syrichta
ENSPTRG00000010021	MBD1	99	69.258	ENSCAPG00000015782	MBD1	96	68.421	Cavia_aperea
ENSPTRG00000010021	MBD1	96	73.604	ENSCPOG00000001671	MBD1	100	73.053	Cavia_porcellus
ENSPTRG00000010021	MBD1	100	94.327	ENSCCAG00000034600	MBD1	100	94.077	Cebus_capucinus
ENSPTRG00000010021	MBD1	100	99.365	ENSCATG00000029959	MBD1	100	99.365	Cercocebus_atys
ENSPTRG00000010021	MBD1	100	85.556	ENSCLAG00000007457	MBD1	89	85.556	Chinchilla_lanigera
ENSPTRG00000010021	MBD1	100	99.669	ENSCSAG00000018070	MBD1	100	99.669	Chlorocebus_sabaeus
ENSPTRG00000010021	MBD1	100	99.365	ENSCANG00000033425	MBD1	100	99.365	Colobus_angolensis_palliatus
ENSPTRG00000010021	MBD1	100	75.041	ENSCGRG00001014843	Mbd1	100	75.041	Cricetulus_griseus_chok1gshd
ENSPTRG00000010021	MBD1	99	63.668	ENSCGRG00000014135	Mbd1	84	79.310	Cricetulus_griseus_crigri
ENSPTRG00000010021	MBD1	100	82.092	ENSDNOG00000015998	MBD1	100	83.360	Dasypus_novemcinctus
ENSPTRG00000010021	MBD1	99	74.558	ENSDORG00000013917	Mbd1	97	78.963	Dipodomys_ordii
ENSPTRG00000010021	MBD1	100	86.392	ENSEASG00005003857	MBD1	100	87.975	Equus_asinus_asinus
ENSPTRG00000010021	MBD1	100	86.326	ENSECAG00000011497	MBD1	80	87.974	Equus_caballus
ENSPTRG00000010021	MBD1	100	88.291	ENSFCAG00000015730	MBD1	100	87.658	Felis_catus
ENSPTRG00000010021	MBD1	99	80.492	ENSFDAG00000011085	MBD1	96	80.480	Fukomys_damarensis
ENSPTRG00000010021	MBD1	52	52.308	ENSGAFG00000008975	mbd1b	50	34.857	Gambusia_affinis
ENSPTRG00000010021	MBD1	70	31.771	ENSGACG00000012106	-	58	33.983	Gasterosteus_aculeatus
ENSPTRG00000010021	MBD1	100	99.524	ENSGGOG00000016966	MBD1	100	99.524	Gorilla_gorilla
ENSPTRG00000010021	MBD1	100	85.950	ENSHGLG00000008740	MBD1	100	85.950	Heterocephalus_glaber_female
ENSPTRG00000010021	MBD1	100	81.010	ENSHGLG00100005198	MBD1	100	87.948	Heterocephalus_glaber_male
ENSPTRG00000010021	MBD1	62	38.650	ENSIPUG00000015243	-	50	50.602	Ictalurus_punctatus
ENSPTRG00000010021	MBD1	100	83.415	ENSSTOG00000007780	MBD1	100	83.902	Ictidomys_tridecemlineatus
ENSPTRG00000010021	MBD1	98	75.355	ENSJJAG00000022859	Mbd1	96	75.355	Jaculus_jaculus
ENSPTRG00000010021	MBD1	96	34.854	ENSLACG00000002414	-	51	65.079	Latimeria_chalumnae
ENSPTRG00000010021	MBD1	99	75.954	ENSLAFG00000031328	MBD1	97	75.954	Loxodonta_africana
ENSPTRG00000010021	MBD1	100	99.206	ENSMFAG00000026335	MBD1	100	99.206	Macaca_fascicularis
ENSPTRG00000010021	MBD1	100	99.206	ENSMMUG00000009050	MBD1	100	99.206	Macaca_mulatta
ENSPTRG00000010021	MBD1	100	99.206	ENSMNEG00000038822	MBD1	100	99.206	Macaca_nemestrina
ENSPTRG00000010021	MBD1	100	99.524	ENSMLEG00000043121	MBD1	100	99.524	Mandrillus_leucophaeus
ENSPTRG00000010021	MBD1	56	55.385	ENSMAMG00000023341	-	51	59.155	Mastacembelus_armatus
ENSPTRG00000010021	MBD1	100	89.919	ENSMICG00000006414	MBD1	100	90.244	Microcebus_murinus
ENSPTRG00000010021	MBD1	51	73.498	ENSMOCG00000011976	-	100	73.498	Microtus_ochrogaster
ENSPTRG00000010021	MBD1	71	43.415	ENSMODG00000001286	-	58	44.330	Monodelphis_domestica
ENSPTRG00000010021	MBD1	99	67.886	ENSMUSG00000024561	Mbd1	97	68.471	Mus_musculus
ENSPTRG00000010021	MBD1	100	68.680	MGP_PahariEiJ_G0019128	Mbd1	100	68.521	Mus_pahari
ENSPTRG00000010021	MBD1	98	69.368	MGP_SPRETEiJ_G0023304	Mbd1	99	69.805	Mus_spretus
ENSPTRG00000010021	MBD1	100	87.025	ENSMPUG00000008843	MBD1	96	86.709	Mustela_putorius_furo
ENSPTRG00000010021	MBD1	100	85.079	ENSMLUG00000008286	MBD1	96	85.079	Myotis_lucifugus
ENSPTRG00000010021	MBD1	98	73.391	ENSNGAG00000011412	Mbd1	96	73.391	Nannospalax_galili
ENSPTRG00000010021	MBD1	100	83.618	ENSNLEG00000032711	-	100	83.618	Nomascus_leucogenys
ENSPTRG00000010021	MBD1	100	98.909	ENSNLEG00000011661	-	100	98.909	Nomascus_leucogenys
ENSPTRG00000010021	MBD1	100	74.711	ENSOPRG00000007647	MBD1	100	74.711	Ochotona_princeps
ENSPTRG00000010021	MBD1	99	78.269	ENSODEG00000018451	MBD1	97	81.019	Octodon_degus
ENSPTRG00000010021	MBD1	92	46.139	ENSOANG00000014593	-	100	47.727	Ornithorhynchus_anatinus
ENSPTRG00000010021	MBD1	100	83.677	ENSOCUG00000006554	MBD1	100	84.152	Oryctolagus_cuniculus
ENSPTRG00000010021	MBD1	100	87.656	ENSOGAG00000003784	MBD1	96	87.656	Otolemur_garnettii
ENSPTRG00000010021	MBD1	100	85.918	ENSOARG00000004218	MBD1	95	86.076	Ovis_aries
ENSPTRG00000010021	MBD1	100	100.000	ENSPPAG00000038886	MBD1	100	100.000	Pan_paniscus
ENSPTRG00000010021	MBD1	100	88.468	ENSPPRG00000021387	MBD1	100	87.816	Panthera_pardus
ENSPTRG00000010021	MBD1	100	88.468	ENSPTIG00000021231	MBD1	100	87.816	Panthera_tigris_altaica
ENSPTRG00000010021	MBD1	100	99.505	ENSPANG00000010867	MBD1	100	99.505	Papio_anubis
ENSPTRG00000010021	MBD1	99	63.993	ENSPEMG00000022630	Mbd1	97	63.932	Peromyscus_maniculatus_bairdii
ENSPTRG00000010021	MBD1	92	53.681	ENSPCIG00000027937	-	84	45.396	Phascolarctos_cinereus
ENSPTRG00000010021	MBD1	55	53.846	ENSPFOG00000007511	mbd1b	50	32.338	Poecilia_formosa
ENSPTRG00000010021	MBD1	52	53.846	ENSPLAG00000021258	mbd1b	50	34.286	Poecilia_latipinna
ENSPTRG00000010021	MBD1	62	53.846	ENSPMEG00000024145	mbd1b	50	32.338	Poecilia_mexicana
ENSPTRG00000010021	MBD1	52	53.846	ENSPREG00000021805	mbd1b	50	34.286	Poecilia_reticulata
ENSPTRG00000010021	MBD1	100	99.339	ENSPPYG00000009158	MBD1	91	99.339	Pongo_abelii
ENSPTRG00000010021	MBD1	99	76.529	ENSPCAG00000001648	MBD1	93	86.260	Procavia_capensis
ENSPTRG00000010021	MBD1	100	92.574	ENSPCOG00000012450	MBD1	100	92.574	Propithecus_coquereli
ENSPTRG00000010021	MBD1	99	55.272	ENSRNOG00000024104	Mbd1	98	61.258	Rattus_norvegicus
ENSPTRG00000010021	MBD1	99	98.763	ENSRBIG00000041294	MBD1	99	98.763	Rhinopithecus_bieti
ENSPTRG00000010021	MBD1	100	99.206	ENSRROG00000032517	MBD1	100	99.206	Rhinopithecus_roxellana
ENSPTRG00000010021	MBD1	100	95.645	ENSSBOG00000027169	MBD1	100	95.645	Saimiri_boliviensis_boliviensis
ENSPTRG00000010021	MBD1	84	46.253	ENSSHAG00000003661	-	100	47.335	Sarcophilus_harrisii
ENSPTRG00000010021	MBD1	51	51.111	ENSSPAG00000021447	mbd1b	51	34.359	Stegastes_partitus
ENSPTRG00000010021	MBD1	100	86.116	ENSSSCG00000004516	MBD1	98	88.145	Sus_scrofa
ENSPTRG00000010021	MBD1	51	50.538	ENSTRUG00000013422	mbd1b	50	31.026	Takifugu_rubripes
ENSPTRG00000010021	MBD1	72	83.544	ENSTBEG00000012651	-	68	84.167	Tupaia_belangeri
ENSPTRG00000010021	MBD1	100	84.679	ENSTTRG00000015523	MBD1	100	84.185	Tursiops_truncatus
ENSPTRG00000010021	MBD1	100	83.003	ENSUAMG00000004752	MBD1	100	83.993	Ursus_americanus
ENSPTRG00000010021	MBD1	100	87.644	ENSUMAG00000002947	MBD1	100	86.985	Ursus_maritimus