EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000010185 (Gene tree)
Gene ID: -
Gene Symbol: SBNO2
Alias: -
Full Name: strawberry notch homolog 2
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 45006 bases
Position: chr19:1079651-1124656
Accession: 13662
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000088456	ResIII	PF04851.15	1.2e-05	1	1
ENSPTRP00000069364	ResIII	PF04851.15	1.2e-05	1	1
ENSPTRP00000017317	ResIII	PF04851.15	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000107929	-	3921	-	ENSPTRP00000088456	1306 (aa)	-	A0A2I3TGV1
ENSPTRT00000096879	-	4511	XM_016934518	ENSPTRP00000069364	1307 (aa)	XP_016790007	A0A2I3RXN2
ENSPTRT00000018703	-	4053	-	ENSPTRP00000017317	1350 (aa)	-	H2QET8

Gene Model

Click here to download ENSPTRG00000010185's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000010185's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000010185	SBNO2	72	68.481	ENSPTRG00000005597	SBNO1	82	58.019

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000010185	SBNO2	100	99.389	ENSG00000064932	SBNO2	100	99.389	Homo_sapiens
ENSPTRG00000010185	SBNO2	88	69.430	ENSAPOG00000003185	si:ch73-63e15.2	87	67.979	Acanthochromis_polyacanthus
ENSPTRG00000010185	SBNO2	89	68.403	ENSAOCG00000016581	si:ch73-63e15.2	95	68.902	Amphiprion_ocellaris
ENSPTRG00000010185	SBNO2	88	69.257	ENSAPEG00000008862	si:ch73-63e15.2	76	68.664	Amphiprion_percula
ENSPTRG00000010185	SBNO2	88	69.231	ENSATEG00000023838	si:ch73-63e15.2	94	70.466	Anabas_testudineus
ENSPTRG00000010185	SBNO2	97	71.889	ENSAPLG00000007158	SBNO2	100	71.275	Anas_platyrhynchos
ENSPTRG00000010185	SBNO2	100	92.502	ENSANAG00000026685	SBNO2	100	92.037	Aotus_nancymaae
ENSPTRG00000010185	SBNO2	87	68.864	ENSACLG00000005090	si:ch73-63e15.2	72	68.571	Astatotilapia_calliptera
ENSPTRG00000010185	SBNO2	90	66.502	ENSAMXG00000018868	sbno2a	97	69.392	Astyanax_mexicanus
ENSPTRG00000010185	SBNO2	89	68.777	ENSAMXG00000015881	si:ch73-63e15.2	84	68.809	Astyanax_mexicanus
ENSPTRG00000010185	SBNO2	99	86.280	ENSBTAG00000020780	SBNO2	100	86.084	Bos_taurus
ENSPTRG00000010185	SBNO2	99	86.346	ENSCAFG00000019543	SBNO2	95	87.033	Canis_familiaris
ENSPTRG00000010185	SBNO2	92	88.990	ENSCAFG00020017115	SBNO2	93	89.073	Canis_lupus_dingo
ENSPTRG00000010185	SBNO2	99	86.419	ENSCHIG00000026127	SBNO2	97	86.605	Capra_hircus
ENSPTRG00000010185	SBNO2	89	85.128	ENSCAPG00000005731	SBNO2	96	85.299	Cavia_aperea
ENSPTRG00000010185	SBNO2	99	82.096	ENSCPOG00000007477	SBNO2	97	82.254	Cavia_porcellus
ENSPTRG00000010185	SBNO2	100	92.349	ENSCCAG00000037518	SBNO2	100	92.266	Cebus_capucinus
ENSPTRG00000010185	SBNO2	100	98.168	ENSCATG00000037046	SBNO2	100	97.937	Cercocebus_atys
ENSPTRG00000010185	SBNO2	88	88.754	ENSCLAG00000010178	SBNO2	99	88.927	Chinchilla_lanigera
ENSPTRG00000010185	SBNO2	100	97.939	ENSCSAG00000012317	SBNO2	96	97.939	Chlorocebus_sabaeus
ENSPTRG00000010185	SBNO2	99	70.314	ENSCPBG00000008920	SBNO2	99	69.112	Chrysemys_picta_bellii
ENSPTRG00000010185	SBNO2	86	97.959	ENSCANG00000036745	SBNO2	98	97.602	Colobus_angolensis_palliatus
ENSPTRG00000010185	SBNO2	99	80.901	ENSCGRG00001023960	Sbno2	96	82.083	Cricetulus_griseus_chok1gshd
ENSPTRG00000010185	SBNO2	99	82.748	ENSCGRG00000011984	Sbno2	96	83.321	Cricetulus_griseus_crigri
ENSPTRG00000010185	SBNO2	87	66.259	ENSCSEG00000006856	si:ch73-63e15.2	90	70.000	Cynoglossus_semilaevis
ENSPTRG00000010185	SBNO2	88	68.003	ENSCVAG00000005663	si:ch73-63e15.2	77	67.549	Cyprinodon_variegatus
ENSPTRG00000010185	SBNO2	91	63.864	ENSDARG00000098801	sbno2a	75	70.809	Danio_rerio
ENSPTRG00000010185	SBNO2	89	67.032	ENSDARG00000016188	SBNO2	82	67.324	Danio_rerio
ENSPTRG00000010185	SBNO2	99	86.880	ENSDORG00000002916	Sbno2	96	86.031	Dipodomys_ordii
ENSPTRG00000010185	SBNO2	99	85.245	ENSEASG00005021621	SBNO2	100	85.660	Equus_asinus_asinus
ENSPTRG00000010185	SBNO2	99	85.245	ENSECAG00000011827	SBNO2	100	85.584	Equus_caballus
ENSPTRG00000010185	SBNO2	88	69.558	ENSELUG00000020457	si:ch73-63e15.2	78	69.418	Esox_lucius
ENSPTRG00000010185	SBNO2	91	74.550	ENSFALG00000013988	SBNO2	91	73.440	Ficedula_albicollis
ENSPTRG00000010185	SBNO2	99	80.338	ENSFDAG00000015186	SBNO2	97	80.978	Fukomys_damarensis
ENSPTRG00000010185	SBNO2	89	67.632	ENSFHEG00000022262	si:ch73-63e15.2	76	67.436	Fundulus_heteroclitus
ENSPTRG00000010185	SBNO2	91	66.419	ENSGMOG00000007542	si:ch73-63e15.2	97	67.687	Gadus_morhua
ENSPTRG00000010185	SBNO2	90	67.404	ENSGAFG00000004860	si:ch73-63e15.2	91	67.466	Gambusia_affinis
ENSPTRG00000010185	SBNO2	87	69.251	ENSGACG00000013190	si:ch73-63e15.2	98	68.270	Gasterosteus_aculeatus
ENSPTRG00000010185	SBNO2	99	70.503	ENSGAGG00000008348	SBNO2	92	73.476	Gopherus_agassizii
ENSPTRG00000010185	SBNO2	87	68.750	ENSHBUG00000010742	si:ch73-63e15.2	76	68.458	Haplochromis_burtoni
ENSPTRG00000010185	SBNO2	99	86.381	ENSHGLG00000008739	SBNO2	96	86.075	Heterocephalus_glaber_female
ENSPTRG00000010185	SBNO2	92	85.903	ENSHGLG00100005269	SBNO2	99	89.533	Heterocephalus_glaber_male
ENSPTRG00000010185	SBNO2	89	66.724	ENSHCOG00000000884	si:ch73-63e15.2	86	67.153	Hippocampus_comes
ENSPTRG00000010185	SBNO2	89	66.440	ENSIPUG00000019672	sbno2	93	69.958	Ictalurus_punctatus
ENSPTRG00000010185	SBNO2	88	69.291	ENSIPUG00000000537	si:ch73-63e15.2	85	68.205	Ictalurus_punctatus
ENSPTRG00000010185	SBNO2	99	86.631	ENSSTOG00000025832	SBNO2	96	86.402	Ictidomys_tridecemlineatus
ENSPTRG00000010185	SBNO2	99	82.096	ENSJJAG00000017397	Sbno2	96	81.867	Jaculus_jaculus
ENSPTRG00000010185	SBNO2	89	68.627	ENSKMAG00000005541	si:ch73-63e15.2	77	68.089	Kryptolebias_marmoratus
ENSPTRG00000010185	SBNO2	88	67.811	ENSLBEG00000025016	si:ch73-63e15.2	95	70.386	Labrus_bergylta
ENSPTRG00000010185	SBNO2	51	72.090	ENSLACG00000012598	SBNO2	96	75.258	Latimeria_chalumnae
ENSPTRG00000010185	SBNO2	88	70.052	ENSLOCG00000004643	si:ch73-63e15.2	84	69.896	Lepisosteus_oculatus
ENSPTRG00000010185	SBNO2	99	78.598	ENSLAFG00000008824	SBNO2	99	80.173	Loxodonta_africana
ENSPTRG00000010185	SBNO2	100	93.884	ENSMFAG00000040030	SBNO2	100	93.650	Macaca_fascicularis
ENSPTRG00000010185	SBNO2	100	98.015	ENSMMUG00000010886	SBNO2	100	95.038	Macaca_mulatta
ENSPTRG00000010185	SBNO2	100	98.317	ENSMNEG00000039927	SBNO2	100	98.086	Macaca_nemestrina
ENSPTRG00000010185	SBNO2	87	98.711	ENSMLEG00000038556	SBNO2	93	98.711	Mandrillus_leucophaeus
ENSPTRG00000010185	SBNO2	89	68.380	ENSMAMG00000018758	si:ch73-63e15.2	76	67.428	Mastacembelus_armatus
ENSPTRG00000010185	SBNO2	87	68.750	ENSMZEG00005010682	si:ch73-63e15.2	72	68.458	Maylandia_zebra
ENSPTRG00000010185	SBNO2	99	72.727	ENSMGAG00000003801	SBNO2	99	71.766	Meleagris_gallopavo
ENSPTRG00000010185	SBNO2	99	83.422	ENSMAUG00000008034	Sbno2	96	84.074	Mesocricetus_auratus
ENSPTRG00000010185	SBNO2	99	88.668	ENSMICG00000013071	SBNO2	100	88.668	Microcebus_murinus
ENSPTRG00000010185	SBNO2	99	83.474	ENSMOCG00000010504	Sbno2	96	83.244	Microtus_ochrogaster
ENSPTRG00000010185	SBNO2	99	73.432	ENSMODG00000005382	SBNO2	95	72.989	Monodelphis_domestica
ENSPTRG00000010185	SBNO2	74	64.249	ENSMALG00000021831	si:ch73-63e15.2	97	64.749	Monopterus_albus
ENSPTRG00000010185	SBNO2	99	82.862	ENSMUSG00000035673	Sbno2	96	85.097	Mus_musculus
ENSPTRG00000010185	SBNO2	99	83.078	MGP_PahariEiJ_G0030976	Sbno2	96	82.772	Mus_pahari
ENSPTRG00000010185	SBNO2	99	83.078	MGP_SPRETEiJ_G0016381	Sbno2	95	84.795	Mus_spretus
ENSPTRG00000010185	SBNO2	78	88.616	ENSMPUG00000008747	SBNO2	94	88.616	Mustela_putorius_furo
ENSPTRG00000010185	SBNO2	99	81.317	ENSNGAG00000004308	Sbno2	96	81.470	Nannospalax_galili
ENSPTRG00000010185	SBNO2	84	67.296	ENSNBRG00000022968	si:ch73-63e15.2	96	72.292	Neolamprologus_brichardi
ENSPTRG00000010185	SBNO2	94	98.923	ENSNLEG00000001305	SBNO2	100	98.923	Nomascus_leucogenys
ENSPTRG00000010185	SBNO2	76	75.450	ENSMEUG00000013511	-	78	75.026	Notamacropus_eugenii
ENSPTRG00000010185	SBNO2	94	84.459	ENSOPRG00000017238	SBNO2	100	84.459	Ochotona_princeps
ENSPTRG00000010185	SBNO2	99	82.811	ENSODEG00000011822	SBNO2	97	83.538	Octodon_degus
ENSPTRG00000010185	SBNO2	88	68.158	ENSONIG00000002490	si:ch73-63e15.2	92	67.692	Oreochromis_niloticus
ENSPTRG00000010185	SBNO2	88	67.382	ENSORLG00000000913	si:ch73-63e15.2	78	66.440	Oryzias_latipes
ENSPTRG00000010185	SBNO2	88	67.380	ENSORLG00020010978	si:ch73-63e15.2	78	66.440	Oryzias_latipes_hni
ENSPTRG00000010185	SBNO2	88	67.551	ENSORLG00015000202	si:ch73-63e15.2	78	66.610	Oryzias_latipes_hsok
ENSPTRG00000010185	SBNO2	88	67.897	ENSOMEG00000000359	si:ch73-63e15.2	73	67.354	Oryzias_melastigma
ENSPTRG00000010185	SBNO2	99	80.869	ENSOARG00000011130	SBNO2	95	80.945	Ovis_aries
ENSPTRG00000010185	SBNO2	100	95.530	ENSPPAG00000032482	SBNO2	100	95.527	Pan_paniscus
ENSPTRG00000010185	SBNO2	100	94.504	ENSPANG00000009658	SBNO2	100	94.194	Papio_anubis
ENSPTRG00000010185	SBNO2	83	68.464	ENSPKIG00000009707	-	85	68.638	Paramormyrops_kingsleyae
ENSPTRG00000010185	SBNO2	88	67.728	ENSPKIG00000024201	si:ch73-63e15.2	83	68.439	Paramormyrops_kingsleyae
ENSPTRG00000010185	SBNO2	74	80.102	ENSPSIG00000002852	SBNO2	100	79.797	Pelodiscus_sinensis
ENSPTRG00000010185	SBNO2	89	66.954	ENSPMGG00000014375	si:ch73-63e15.2	88	66.093	Periophthalmus_magnuspinnatus
ENSPTRG00000010185	SBNO2	99	81.087	ENSPEMG00000024122	Sbno2	96	81.164	Peromyscus_maniculatus_bairdii
ENSPTRG00000010185	SBNO2	99	74.704	ENSPCIG00000011264	SBNO2	95	74.351	Phascolarctos_cinereus
ENSPTRG00000010185	SBNO2	88	68.793	ENSPFOG00000004096	si:ch73-63e15.2	99	68.398	Poecilia_formosa
ENSPTRG00000010185	SBNO2	88	68.045	ENSPLAG00000014653	si:ch73-63e15.2	77	67.637	Poecilia_latipinna
ENSPTRG00000010185	SBNO2	87	68.641	ENSPMEG00000002129	si:ch73-63e15.2	88	70.909	Poecilia_mexicana
ENSPTRG00000010185	SBNO2	87	68.343	ENSPREG00000006755	si:ch73-63e15.2	72	68.142	Poecilia_reticulata
ENSPTRG00000010185	SBNO2	99	77.156	ENSPCAG00000012256	SBNO2	98	77.307	Procavia_capensis
ENSPTRG00000010185	SBNO2	99	80.581	ENSPCOG00000015216	SBNO2	100	81.269	Propithecus_coquereli
ENSPTRG00000010185	SBNO2	89	68.027	ENSPNYG00000019926	si:ch73-63e15.2	77	67.915	Pundamilia_nyererei
ENSPTRG00000010185	SBNO2	89	68.942	ENSPNAG00000020260	si:ch73-63e15.2	83	68.974	Pygocentrus_nattereri
ENSPTRG00000010185	SBNO2	88	68.435	ENSPNAG00000026609	sbno2a	86	69.344	Pygocentrus_nattereri
ENSPTRG00000010185	SBNO2	99	83.691	ENSRNOG00000013987	Sbno2	98	84.264	Rattus_norvegicus
ENSPTRG00000010185	SBNO2	100	82.569	ENSRBIG00000009740	SBNO2	100	82.249	Rhinopithecus_bieti
ENSPTRG00000010185	SBNO2	89	98.578	ENSRROG00000044671	SBNO2	99	98.221	Rhinopithecus_roxellana
ENSPTRG00000010185	SBNO2	100	93.114	ENSSBOG00000023562	SBNO2	100	92.802	Saimiri_boliviensis_boliviensis
ENSPTRG00000010185	SBNO2	89	78.816	ENSSHAG00000010241	SBNO2	100	78.541	Sarcophilus_harrisii
ENSPTRG00000010185	SBNO2	90	65.628	ENSSFOG00015005861	si:ch73-63e15.2	95	65.601	Scleropages_formosus
ENSPTRG00000010185	SBNO2	88	68.135	ENSSMAG00000012489	si:ch73-63e15.2	74	67.551	Scophthalmus_maximus
ENSPTRG00000010185	SBNO2	89	68.606	ENSSDUG00000003527	si:ch73-63e15.2	74	68.552	Seriola_dumerili
ENSPTRG00000010185	SBNO2	89	68.520	ENSSLDG00000004623	si:ch73-63e15.2	74	68.466	Seriola_lalandi_dorsalis
ENSPTRG00000010185	SBNO2	88	69.033	ENSSPAG00000017717	si:ch73-63e15.2	76	68.921	Stegastes_partitus
ENSPTRG00000010185	SBNO2	97	87.363	ENSSSCG00000030042	SBNO2	98	86.963	Sus_scrofa
ENSPTRG00000010185	SBNO2	89	67.182	ENSTRUG00000018193	si:ch73-63e15.2	89	66.868	Takifugu_rubripes
ENSPTRG00000010185	SBNO2	88	88.981	ENSUAMG00000006568	SBNO2	98	86.667	Ursus_americanus
ENSPTRG00000010185	SBNO2	90	89.425	ENSVVUG00000022823	SBNO2	95	84.488	Vulpes_vulpes
ENSPTRG00000010185	SBNO2	79	70.962	ENSXETG00000021579	sbno2	97	69.419	Xenopus_tropicalis
ENSPTRG00000010185	SBNO2	73	70.186	ENSXCOG00000009209	si:ch73-63e15.2	89	71.413	Xiphophorus_couchianus
ENSPTRG00000010185	SBNO2	88	67.873	ENSXMAG00000012091	si:ch73-63e15.2	83	70.959	Xiphophorus_maculatus