EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000010334 (Gene tree)
Gene ID: -
Gene Symbol: SAFB2
Alias: -
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 35603 bases
Position: chr19:5822275-5857877
Accession: 2257
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000017577	RRM_5	PF13893.6	4.3e-06	1	1
ENSPTRP00000087551	RRM_5	PF13893.6	4.4e-06	1	1
ENSPTRP00000087551	RRM_1	PF00076.22	7.3e-14	1	1
ENSPTRP00000017577	RRM_1	PF00076.22	7.4e-14	1	1
ENSPTRP00000087551	SAP	PF02037.27	2.7e-10	1	1
ENSPTRP00000017577	SAP	PF02037.27	2.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000077991	-	2775	-	ENSPTRP00000087551	924 (aa)	-	A0A2I3TE76
ENSPTRT00000018990	-	2763	XM_016934771	ENSPTRP00000017577	920 (aa)	-	H2QF30

Gene Model

Click here to download ENSPTRG00000010334's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000010334's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000010334	SAFB2	98	65.081	ENSPTRG00000010335	SAFB	100	64.805

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000010334	SAFB2	100	93.704	ENSG00000130254	SAFB2	100	100.000	Homo_sapiens
ENSPTRG00000010334	SAFB2	100	80.483	ENSAMEG00000012146	SAFB2	100	80.483	Ailuropoda_melanoleuca
ENSPTRG00000010334	SAFB2	100	90.766	ENSANAG00000031936	SAFB2	100	90.766	Aotus_nancymaae
ENSPTRG00000010334	SAFB2	100	78.512	ENSBTAG00000001790	SAFB2	99	79.060	Bos_taurus
ENSPTRG00000010334	SAFB2	100	82.932	ENSCAFG00000018814	SAFB2	100	83.037	Canis_familiaris
ENSPTRG00000010334	SAFB2	100	82.932	ENSCAFG00020018939	SAFB2	100	83.037	Canis_lupus_dingo
ENSPTRG00000010334	SAFB2	100	77.987	ENSCHIG00000024547	SAFB2	100	78.197	Capra_hircus
ENSPTRG00000010334	SAFB2	93	61.781	ENSCAPG00000011771	SAFB2	100	62.873	Cavia_aperea
ENSPTRG00000010334	SAFB2	100	74.462	ENSCPOG00000011394	SAFB2	100	74.796	Cavia_porcellus
ENSPTRG00000010334	SAFB2	100	90.451	ENSCCAG00000017348	SAFB2	100	90.556	Cebus_capucinus
ENSPTRG00000010334	SAFB2	100	90.976	ENSCATG00000039497	SAFB2	100	91.186	Cercocebus_atys
ENSPTRG00000010334	SAFB2	100	92.025	ENSCSAG00000009959	SAFB2	100	92.235	Chlorocebus_sabaeus
ENSPTRG00000010334	SAFB2	73	69.492	ENSCHOG00000010684	SAFB2	99	69.633	Choloepus_hoffmanni
ENSPTRG00000010334	SAFB2	100	88.889	ENSCANG00000024675	SAFB2	100	89.557	Colobus_angolensis_palliatus
ENSPTRG00000010334	SAFB2	97	73.748	ENSCGRG00001015833	Safb2	92	72.796	Cricetulus_griseus_chok1gshd
ENSPTRG00000010334	SAFB2	97	73.748	ENSCGRG00000011131	Safb2	92	72.796	Cricetulus_griseus_crigri
ENSPTRG00000010334	SAFB2	94	71.366	ENSDORG00000016199	Safb2	100	71.694	Dipodomys_ordii
ENSPTRG00000010334	SAFB2	86	77.966	ENSEASG00005022952	SAFB2	91	77.106	Equus_asinus_asinus
ENSPTRG00000010334	SAFB2	98	78.571	ENSECAG00000018978	SAFB2	100	78.097	Equus_caballus
ENSPTRG00000010334	SAFB2	100	81.866	ENSFCAG00000011834	SAFB2	100	81.971	Felis_catus
ENSPTRG00000010334	SAFB2	93	75.238	ENSFDAG00000020009	SAFB2	93	74.759	Fukomys_damarensis
ENSPTRG00000010334	SAFB2	100	88.947	ENSGGOG00000015093	SAFB2	100	88.321	Gorilla_gorilla
ENSPTRG00000010334	SAFB2	100	80.330	ENSHGLG00000017442	SAFB2	100	81.398	Heterocephalus_glaber_female
ENSPTRG00000010334	SAFB2	98	78.830	ENSLAFG00000003836	SAFB2	99	76.784	Loxodonta_africana
ENSPTRG00000010334	SAFB2	100	92.445	ENSMFAG00000039706	SAFB2	100	92.445	Macaca_fascicularis
ENSPTRG00000010334	SAFB2	100	92.340	ENSMMUG00000017968	SAFB2	100	92.550	Macaca_mulatta
ENSPTRG00000010334	SAFB2	100	87.933	ENSMNEG00000032042	SAFB2	100	87.933	Macaca_nemestrina
ENSPTRG00000010334	SAFB2	100	92.655	ENSMLEG00000034562	SAFB2	100	92.655	Mandrillus_leucophaeus
ENSPTRG00000010334	SAFB2	85	73.693	ENSMAUG00000011573	Safb2	94	73.381	Mesocricetus_auratus
ENSPTRG00000010334	SAFB2	100	85.131	ENSMICG00000008711	SAFB2	100	85.445	Microcebus_murinus
ENSPTRG00000010334	SAFB2	100	64.802	ENSMOCG00000006827	Safb2	100	63.701	Microtus_ochrogaster
ENSPTRG00000010334	SAFB2	98	68.790	ENSMODG00000001178	SAFB2	100	68.361	Monodelphis_domestica
ENSPTRG00000010334	SAFB2	100	64.513	MGP_CAROLIEiJ_G0021779	Safb2	100	63.781	Mus_caroli
ENSPTRG00000010334	SAFB2	96	74.809	ENSMUSG00000042625	Safb2	100	64.044	Mus_musculus
ENSPTRG00000010334	SAFB2	100	64.200	MGP_PahariEiJ_G0020768	Safb2	100	62.963	Mus_pahari
ENSPTRG00000010334	SAFB2	100	64.599	MGP_SPRETEiJ_G0022690	Safb2	100	63.347	Mus_spretus
ENSPTRG00000010334	SAFB2	100	81.466	ENSMPUG00000006106	SAFB2	93	81.571	Mustela_putorius_furo
ENSPTRG00000010334	SAFB2	100	78.848	ENSMLUG00000001050	SAFB2	100	76.126	Myotis_lucifugus
ENSPTRG00000010334	SAFB2	100	91.387	ENSNLEG00000013514	SAFB2	100	91.597	Nomascus_leucogenys
ENSPTRG00000010334	SAFB2	93	64.904	ENSMEUG00000002456	SAFB2	100	64.752	Notamacropus_eugenii
ENSPTRG00000010334	SAFB2	100	70.533	ENSOPRG00000011523	-	100	70.084	Ochotona_princeps
ENSPTRG00000010334	SAFB2	100	77.066	ENSODEG00000014751	SAFB2	100	77.169	Octodon_degus
ENSPTRG00000010334	SAFB2	100	85.729	ENSOGAG00000006855	SAFB2	100	84.672	Otolemur_garnettii
ENSPTRG00000010334	SAFB2	97	70.282	ENSOARG00000007982	SAFB2	67	76.221	Ovis_aries
ENSPTRG00000010334	SAFB2	100	93.914	ENSPPAG00000043392	SAFB2	100	93.914	Pan_paniscus
ENSPTRG00000010334	SAFB2	100	81.761	ENSPPRG00000011310	SAFB2	100	81.971	Panthera_pardus
ENSPTRG00000010334	SAFB2	81	78.696	ENSPTIG00000015120	SAFB2	91	78.696	Panthera_tigris_altaica
ENSPTRG00000010334	SAFB2	100	92.550	ENSPANG00000007004	SAFB2	100	92.550	Papio_anubis
ENSPTRG00000010334	SAFB2	100	63.210	ENSPEMG00000016015	Safb2	100	62.475	Peromyscus_maniculatus_bairdii
ENSPTRG00000010334	SAFB2	65	75.000	ENSPCIG00000009518	-	99	78.439	Phascolarctos_cinereus
ENSPTRG00000010334	SAFB2	100	92.970	ENSPPYG00000009427	SAFB2	100	92.970	Pongo_abelii
ENSPTRG00000010334	SAFB2	100	74.974	ENSPCAG00000006352	SAFB2	99	75.902	Procavia_capensis
ENSPTRG00000010334	SAFB2	100	83.970	ENSPCOG00000023260	SAFB2	100	82.945	Propithecus_coquereli
ENSPTRG00000010334	SAFB2	58	86.957	ENSPVAG00000004902	-	71	86.957	Pteropus_vampyrus
ENSPTRG00000010334	SAFB2	81	63.882	ENSRNOG00000049511	AABR07066522.1	100	63.592	Rattus_norvegicus
ENSPTRG00000010334	SAFB2	84	97.198	ENSRBIG00000033446	SAFB2	100	97.198	Rhinopithecus_bieti
ENSPTRG00000010334	SAFB2	100	92.130	ENSRROG00000006606	SAFB2	100	92.340	Rhinopithecus_roxellana
ENSPTRG00000010334	SAFB2	100	89.630	ENSSBOG00000032315	SAFB2	100	89.800	Saimiri_boliviensis_boliviensis
ENSPTRG00000010334	SAFB2	98	68.455	ENSSHAG00000012703	SAFB2	100	67.437	Sarcophilus_harrisii
ENSPTRG00000010334	SAFB2	80	68.105	ENSSARG00000000649	SAFB2	100	68.889	Sorex_araneus
ENSPTRG00000010334	SAFB2	100	83.037	ENSSSCG00000013523	SAFB2	100	83.351	Sus_scrofa
ENSPTRG00000010334	SAFB2	76	70.342	ENSTBEG00000012709	SAFB2	85	70.722	Tupaia_belangeri
ENSPTRG00000010334	SAFB2	93	74.327	ENSTTRG00000013585	SAFB2	93	74.327	Tursiops_truncatus
ENSPTRG00000010334	SAFB2	98	82.391	ENSUAMG00000024695	SAFB2	97	82.497	Ursus_americanus
ENSPTRG00000010334	SAFB2	85	76.795	ENSUMAG00000009585	SAFB2	90	76.962	Ursus_maritimus
ENSPTRG00000010334	SAFB2	73	90.625	ENSVPAG00000012041	SAFB2	89	90.625	Vicugna_pacos
ENSPTRG00000010334	SAFB2	100	82.932	ENSVVUG00000013695	SAFB2	100	83.037	Vulpes_vulpes