EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000010335 (Gene tree)
Gene ID: 455619
Gene Symbol: SAFB
Alias: -
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 64992 bases
Position: chr19:5858197-5923188
Accession: 2258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000072913	RRM_5	PF13893.6	5.3e-07	1	1
ENSPTRP00000089785	RRM_5	PF13893.6	5.6e-07	1	1
ENSPTRP00000017578	RRM_5	PF13893.6	5.6e-07	1	1
ENSPTRP00000071918	RRM_5	PF13893.6	5.7e-07	1	1
ENSPTRP00000072913	RRM_1	PF00076.22	5.5e-13	1	1
ENSPTRP00000071918	RRM_1	PF00076.22	5.6e-13	1	1
ENSPTRP00000017578	RRM_1	PF00076.22	5.7e-13	1	1
ENSPTRP00000089785	RRM_1	PF00076.22	5.9e-13	1	1
ENSPTRP00000067681	SAP	PF02037.27	1.4e-10	1	1
ENSPTRP00000072913	SAP	PF02037.27	1.6e-09	1	1
ENSPTRP00000017578	SAP	PF02037.27	1.7e-09	1	1
ENSPTRP00000071918	SAP	PF02037.27	1.8e-09	1	1
ENSPTRP00000089785	SAP	PF02037.27	6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000086543	-	2547	-	ENSPTRP00000072913	848 (aa)	-	A0A2I3S7G4
ENSPTRT00000086064	-	2751	-	ENSPTRP00000089785	916 (aa)	-	A0A2I3TKK1
ENSPTRT00000100212	-	2772	-	ENSPTRP00000071918	923 (aa)	-	A0A2I3S4K3
ENSPTRT00000018991	-	3111	XM_016934765	ENSPTRP00000017578	917 (aa)	XP_016790254	H2QF31
ENSPTRT00000090346	-	321	-	ENSPTRP00000067681	106 (aa)	-	A0A2I3RSM0

Gene Model

Click here to download ENSPTRG00000010335's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000010335's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000010335	SAFB	100	64.805	ENSPTRG00000010334	SAFB2	98	65.081

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000010335	SAFB	100	100.000	ENSG00000160633	SAFB	100	100.000	Homo_sapiens
ENSPTRG00000010335	SAFB	90	45.202	ENSAPOG00000022508	safb	65	42.903	Acanthochromis_polyacanthus
ENSPTRG00000010335	SAFB	100	91.965	ENSAMEG00000012254	SAFB	98	91.862	Ailuropoda_melanoleuca
ENSPTRG00000010335	SAFB	94	40.112	ENSACIG00000006247	safb	95	43.473	Amphilophus_citrinellus
ENSPTRG00000010335	SAFB	92	44.222	ENSAOCG00000006308	safb	71	42.609	Amphiprion_ocellaris
ENSPTRG00000010335	SAFB	90	44.804	ENSAPEG00000023342	safb	66	42.710	Amphiprion_percula
ENSPTRG00000010335	SAFB	95	41.901	ENSATEG00000004998	safb	66	41.667	Anabas_testudineus
ENSPTRG00000010335	SAFB	93	64.902	ENSAPLG00000005780	-	100	64.747	Anas_platyrhynchos
ENSPTRG00000010335	SAFB	89	62.932	ENSAPLG00000006355	-	99	64.839	Anas_platyrhynchos
ENSPTRG00000010335	SAFB	100	98.037	ENSANAG00000028821	SAFB	100	98.037	Aotus_nancymaae
ENSPTRG00000010335	SAFB	95	42.047	ENSACLG00000001926	safb	64	43.118	Astatotilapia_calliptera
ENSPTRG00000010335	SAFB	85	57.447	ENSAMXG00000018154	safb	94	44.382	Astyanax_mexicanus
ENSPTRG00000010335	SAFB	88	92.473	ENSBTAG00000051794	-	91	90.164	Bos_taurus
ENSPTRG00000010335	SAFB	100	88.671	ENSBTAG00000007875	SAFB	100	88.671	Bos_taurus
ENSPTRG00000010335	SAFB	89	98.585	ENSCJAG00000017081	SAFB	100	98.694	Callithrix_jacchus
ENSPTRG00000010335	SAFB	100	93.145	ENSCAFG00000018803	SAFB	87	93.145	Canis_familiaris
ENSPTRG00000010335	SAFB	100	93.145	ENSCAFG00020018943	SAFB	100	93.145	Canis_lupus_dingo
ENSPTRG00000010335	SAFB	100	87.255	ENSCHIG00000007262	SAFB	98	92.453	Capra_hircus
ENSPTRG00000010335	SAFB	63	79.813	ENSTSYG00000001851	-	100	76.330	Carlito_syrichta
ENSPTRG00000010335	SAFB	93	67.905	ENSCAPG00000012121	SAFB	77	83.250	Cavia_aperea
ENSPTRG00000010335	SAFB	100	86.850	ENSCPOG00000026322	SAFB	100	87.063	Cavia_porcellus
ENSPTRG00000010335	SAFB	100	98.585	ENSCCAG00000020193	SAFB	100	98.585	Cebus_capucinus
ENSPTRG00000010335	SAFB	100	99.175	ENSCATG00000029994	SAFB	100	99.175	Cercocebus_atys
ENSPTRG00000010335	SAFB	100	88.380	ENSCLAG00000007734	SAFB	100	89.126	Chinchilla_lanigera
ENSPTRG00000010335	SAFB	100	99.019	ENSCSAG00000009949	SAFB	100	99.019	Chlorocebus_sabaeus
ENSPTRG00000010335	SAFB	86	92.857	ENSCHOG00000003208	SAFB	93	92.857	Choloepus_hoffmanni
ENSPTRG00000010335	SAFB	91	61.582	ENSCPBG00000010936	-	99	61.921	Chrysemys_picta_bellii
ENSPTRG00000010335	SAFB	91	64.657	ENSCPBG00000010928	-	99	64.615	Chrysemys_picta_bellii
ENSPTRG00000010335	SAFB	100	92.366	ENSCANG00000019754	-	100	92.257	Colobus_angolensis_palliatus
ENSPTRG00000010335	SAFB	100	100.000	ENSCANG00000004774	-	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000010335	SAFB	100	83.191	ENSCGRG00001002254	Safb	100	83.298	Cricetulus_griseus_chok1gshd
ENSPTRG00000010335	SAFB	89	82.682	ENSCGRG00000011529	Safb	96	80.664	Cricetulus_griseus_crigri
ENSPTRG00000010335	SAFB	97	40.505	ENSCSEG00000019870	safb	69	42.523	Cynoglossus_semilaevis
ENSPTRG00000010335	SAFB	94	39.933	ENSCVAG00000002226	safb	94	40.024	Cyprinodon_variegatus
ENSPTRG00000010335	SAFB	89	42.308	ENSDARG00000020467	safb	99	44.218	Danio_rerio
ENSPTRG00000010335	SAFB	100	91.948	ENSDNOG00000015746	SAFB	95	92.237	Dasypus_novemcinctus
ENSPTRG00000010335	SAFB	100	82.397	ENSDORG00000016200	Safb	100	82.733	Dipodomys_ordii
ENSPTRG00000010335	SAFB	80	84.286	ENSETEG00000018679	SAFB	85	84.286	Echinops_telfairi
ENSPTRG00000010335	SAFB	100	88.407	ENSEASG00005023019	SAFB	100	88.624	Equus_asinus_asinus
ENSPTRG00000010335	SAFB	100	90.414	ENSECAG00000018659	SAFB	89	90.741	Equus_caballus
ENSPTRG00000010335	SAFB	83	54.444	ENSELUG00000022327	safb	59	55.000	Esox_lucius
ENSPTRG00000010335	SAFB	100	93.036	ENSFCAG00000011835	SAFB	100	93.036	Felis_catus
ENSPTRG00000010335	SAFB	100	64.984	ENSFALG00000013882	-	89	64.895	Ficedula_albicollis
ENSPTRG00000010335	SAFB	90	60.714	ENSFALG00000013881	-	99	61.894	Ficedula_albicollis
ENSPTRG00000010335	SAFB	100	83.333	ENSFDAG00000020306	SAFB	100	88.438	Fukomys_damarensis
ENSPTRG00000010335	SAFB	94	37.727	ENSFHEG00000004219	safb	94	41.756	Fundulus_heteroclitus
ENSPTRG00000010335	SAFB	73	57.692	ENSGMOG00000014280	safb	95	41.784	Gadus_morhua
ENSPTRG00000010335	SAFB	100	64.624	ENSGALG00000013365	-	97	65.000	Gallus_gallus
ENSPTRG00000010335	SAFB	100	62.187	ENSGALG00000001948	-	97	63.578	Gallus_gallus
ENSPTRG00000010335	SAFB	94	38.428	ENSGAFG00000016162	safb	67	39.442	Gambusia_affinis
ENSPTRG00000010335	SAFB	95	42.167	ENSGACG00000011385	safb	67	41.038	Gasterosteus_aculeatus
ENSPTRG00000010335	SAFB	95	62.823	ENSGAGG00000008424	-	97	63.515	Gopherus_agassizii
ENSPTRG00000010335	SAFB	78	59.556	ENSGAGG00000017702	-	100	58.321	Gopherus_agassizii
ENSPTRG00000010335	SAFB	100	100.000	ENSGGOG00000015109	SAFB	100	100.000	Gorilla_gorilla
ENSPTRG00000010335	SAFB	95	39.858	ENSHBUG00000009218	safb	70	43.409	Haplochromis_burtoni
ENSPTRG00000010335	SAFB	100	90.160	ENSHGLG00000015883	SAFB	100	90.267	Heterocephalus_glaber_female
ENSPTRG00000010335	SAFB	100	84.783	ENSHGLG00100004228	SAFB	100	89.110	Heterocephalus_glaber_male
ENSPTRG00000010335	SAFB	91	37.915	ENSHCOG00000001705	safb	96	40.968	Hippocampus_comes
ENSPTRG00000010335	SAFB	86	60.000	ENSIPUG00000024869	safb2	97	46.651	Ictalurus_punctatus
ENSPTRG00000010335	SAFB	93	89.782	ENSSTOG00000002783	SAFB	100	90.241	Ictidomys_tridecemlineatus
ENSPTRG00000010335	SAFB	100	84.926	ENSJJAG00000009021	Safb	100	85.881	Jaculus_jaculus
ENSPTRG00000010335	SAFB	90	44.162	ENSKMAG00000022308	safb	95	42.974	Kryptolebias_marmoratus
ENSPTRG00000010335	SAFB	95	41.838	ENSLBEG00000006015	safb	65	44.895	Labrus_bergylta
ENSPTRG00000010335	SAFB	64	59.420	ENSLACG00000018090	SAFB	100	53.830	Latimeria_chalumnae
ENSPTRG00000010335	SAFB	97	47.154	ENSLOCG00000003613	safb	90	58.407	Lepisosteus_oculatus
ENSPTRG00000010335	SAFB	99	90.424	ENSLAFG00000003840	SAFB	100	89.227	Loxodonta_africana
ENSPTRG00000010335	SAFB	100	99.237	ENSMFAG00000003885	SAFB	100	99.237	Macaca_fascicularis
ENSPTRG00000010335	SAFB	100	99.175	ENSMMUG00000017970	SAFB	100	99.175	Macaca_mulatta
ENSPTRG00000010335	SAFB	100	99.057	ENSMNEG00000035637	SAFB	100	99.057	Macaca_nemestrina
ENSPTRG00000010335	SAFB	100	99.057	ENSMLEG00000038637	SAFB	100	99.057	Mandrillus_leucophaeus
ENSPTRG00000010335	SAFB	95	40.870	ENSMAMG00000003357	safb	60	41.224	Mastacembelus_armatus
ENSPTRG00000010335	SAFB	95	42.249	ENSMZEG00005009120	safb	66	43.860	Maylandia_zebra
ENSPTRG00000010335	SAFB	96	64.516	ENSMGAG00000001101	-	100	62.988	Meleagris_gallopavo
ENSPTRG00000010335	SAFB	88	60.638	ENSMGAG00000001051	-	97	60.870	Meleagris_gallopavo
ENSPTRG00000010335	SAFB	57	90.369	ENSMAUG00000005013	Safb	100	90.369	Mesocricetus_auratus
ENSPTRG00000010335	SAFB	99	86.667	ENSMICG00000034927	-	77	96.739	Microcebus_murinus
ENSPTRG00000010335	SAFB	88	92.473	ENSMICG00000046795	-	98	92.553	Microcebus_murinus
ENSPTRG00000010335	SAFB	100	92.226	ENSMICG00000008739	-	100	91.402	Microcebus_murinus
ENSPTRG00000010335	SAFB	100	83.723	ENSMOCG00000014040	Safb	100	83.830	Microtus_ochrogaster
ENSPTRG00000010335	SAFB	75	56.098	ENSMMOG00000020366	-	65	52.381	Mola_mola
ENSPTRG00000010335	SAFB	100	75.372	ENSMODG00000001236	SAFB	98	75.926	Monodelphis_domestica
ENSPTRG00000010335	SAFB	93	41.112	ENSMALG00000020330	safb	70	41.875	Monopterus_albus
ENSPTRG00000010335	SAFB	100	83.634	MGP_CAROLIEiJ_G0021780	Safb	100	84.060	Mus_caroli
ENSPTRG00000010335	SAFB	100	83.741	ENSMUSG00000071054	Safb	100	84.166	Mus_musculus
ENSPTRG00000010335	SAFB	100	83.227	MGP_PahariEiJ_G0020769	Safb	100	83.970	Mus_pahari
ENSPTRG00000010335	SAFB	100	92.492	ENSMPUG00000006123	SAFB	94	92.492	Mustela_putorius_furo
ENSPTRG00000010335	SAFB	100	90.751	ENSMLUG00000001081	SAFB	100	90.860	Myotis_lucifugus
ENSPTRG00000010335	SAFB	100	81.674	ENSNGAG00000019882	Safb	100	81.992	Nannospalax_galili
ENSPTRG00000010335	SAFB	75	54.651	ENSNBRG00000000496	-	81	54.651	Neolamprologus_brichardi
ENSPTRG00000010335	SAFB	96	99.544	ENSNLEG00000013551	SAFB	100	99.544	Nomascus_leucogenys
ENSPTRG00000010335	SAFB	88	84.889	ENSOPRG00000011561	-	100	85.135	Ochotona_princeps
ENSPTRG00000010335	SAFB	100	90.192	ENSODEG00000014838	SAFB	100	90.299	Octodon_degus
ENSPTRG00000010335	SAFB	95	42.308	ENSONIG00000002318	safb	66	43.942	Oreochromis_niloticus
ENSPTRG00000010335	SAFB	90	81.273	ENSOCUG00000014628	SAFB	64	85.660	Oryctolagus_cuniculus
ENSPTRG00000010335	SAFB	90	41.917	ENSORLG00000016989	safb	64	39.804	Oryzias_latipes
ENSPTRG00000010335	SAFB	94	40.068	ENSORLG00020000404	safb	70	41.754	Oryzias_latipes_hni
ENSPTRG00000010335	SAFB	94	41.538	ENSORLG00015010733	safb	64	39.967	Oryzias_latipes_hsok
ENSPTRG00000010335	SAFB	95	39.394	ENSOMEG00000009066	safb	65	39.448	Oryzias_melastigma
ENSPTRG00000010335	SAFB	100	90.564	ENSOGAG00000027769	SAFB	100	89.913	Otolemur_garnettii
ENSPTRG00000010335	SAFB	100	84.766	ENSOARG00000007662	-	100	84.222	Ovis_aries
ENSPTRG00000010335	SAFB	78	82.098	ENSOARG00000007856	-	100	81.818	Ovis_aries
ENSPTRG00000010335	SAFB	100	100.000	ENSPPAG00000035129	SAFB	100	100.000	Pan_paniscus
ENSPTRG00000010335	SAFB	100	93.036	ENSPPRG00000017197	SAFB	100	93.036	Panthera_pardus
ENSPTRG00000010335	SAFB	100	99.128	ENSPANG00000007770	SAFB	100	99.128	Papio_anubis
ENSPTRG00000010335	SAFB	95	43.026	ENSPKIG00000009902	safb	67	45.840	Paramormyrops_kingsleyae
ENSPTRG00000010335	SAFB	100	62.000	ENSPSIG00000011679	-	100	63.698	Pelodiscus_sinensis
ENSPTRG00000010335	SAFB	99	61.935	ENSPSIG00000009367	-	97	61.364	Pelodiscus_sinensis
ENSPTRG00000010335	SAFB	75	60.241	ENSPMGG00000015973	-	61	61.972	Periophthalmus_magnuspinnatus
ENSPTRG00000010335	SAFB	100	84.009	ENSPEMG00000020428	Safb	100	84.435	Peromyscus_maniculatus_bairdii
ENSPTRG00000010335	SAFB	63	81.400	ENSPCIG00000009504	-	99	82.400	Phascolarctos_cinereus
ENSPTRG00000010335	SAFB	94	39.435	ENSPFOG00000007745	safb	94	41.627	Poecilia_formosa
ENSPTRG00000010335	SAFB	94	38.833	ENSPLAG00000001614	safb	95	40.300	Poecilia_latipinna
ENSPTRG00000010335	SAFB	94	39.503	ENSPMEG00000021023	safb	98	41.576	Poecilia_mexicana
ENSPTRG00000010335	SAFB	93	39.256	ENSPREG00000012496	safb	95	41.294	Poecilia_reticulata
ENSPTRG00000010335	SAFB	100	99.346	ENSPPYG00000009428	SAFB	100	99.346	Pongo_abelii
ENSPTRG00000010335	SAFB	100	86.349	ENSPCAG00000006475	SAFB	100	86.349	Procavia_capensis
ENSPTRG00000010335	SAFB	100	88.380	ENSPCOG00000014090	SAFB	100	88.028	Propithecus_coquereli
ENSPTRG00000010335	SAFB	100	87.736	ENSPCOG00000010436	-	94	87.736	Propithecus_coquereli
ENSPTRG00000010335	SAFB	100	85.889	ENSPVAG00000004913	SAFB	95	89.796	Pteropus_vampyrus
ENSPTRG00000010335	SAFB	94	43.210	ENSPNAG00000021838	safb	97	45.455	Pygocentrus_nattereri
ENSPTRG00000010335	SAFB	100	83.881	ENSRNOG00000050543	Safb	100	84.517	Rattus_norvegicus
ENSPTRG00000010335	SAFB	100	100.000	ENSRBIG00000042509	SAFB	100	100.000	Rhinopithecus_bieti
ENSPTRG00000010335	SAFB	100	100.000	ENSRROG00000029278	SAFB	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000010335	SAFB	100	98.585	ENSSBOG00000026291	SAFB	100	98.585	Saimiri_boliviensis_boliviensis
ENSPTRG00000010335	SAFB	95	44.647	ENSSFOG00015008156	safb	95	46.587	Scleropages_formosus
ENSPTRG00000010335	SAFB	95	40.628	ENSSMAG00000009316	safb	66	42.662	Scophthalmus_maximus
ENSPTRG00000010335	SAFB	95	43.268	ENSSDUG00000009652	safb	89	41.002	Seriola_dumerili
ENSPTRG00000010335	SAFB	95	43.360	ENSSLDG00000001670	safb	65	41.456	Seriola_lalandi_dorsalis
ENSPTRG00000010335	SAFB	93	85.047	ENSSARG00000010475	SAFB	100	85.047	Sorex_araneus
ENSPTRG00000010335	SAFB	87	59.125	ENSSPUG00000009747	-	99	58.160	Sphenodon_punctatus
ENSPTRG00000010335	SAFB	52	57.171	ENSSPUG00000009820	-	99	62.285	Sphenodon_punctatus
ENSPTRG00000010335	SAFB	93	41.581	ENSSPAG00000015682	safb	69	40.989	Stegastes_partitus
ENSPTRG00000010335	SAFB	100	92.043	ENSSSCG00000013522	SAFB	99	93.453	Sus_scrofa
ENSPTRG00000010335	SAFB	96	63.982	ENSTGUG00000000502	-	97	65.092	Taeniopygia_guttata
ENSPTRG00000010335	SAFB	93	61.845	ENSTGUG00000000489	-	97	64.671	Taeniopygia_guttata
ENSPTRG00000010335	SAFB	75	58.537	ENSTRUG00000003567	safb	98	43.243	Takifugu_rubripes
ENSPTRG00000010335	SAFB	87	56.322	ENSTNIG00000015470	safb	90	56.322	Tetraodon_nigroviridis
ENSPTRG00000010335	SAFB	75	90.977	ENSTBEG00000013124	-	66	90.977	Tupaia_belangeri
ENSPTRG00000010335	SAFB	94	98.413	ENSTTRG00000013588	SAFB	92	98.413	Tursiops_truncatus
ENSPTRG00000010335	SAFB	92	92.233	ENSUAMG00000024667	-	88	92.233	Ursus_americanus
ENSPTRG00000010335	SAFB	85	89.603	ENSUAMG00000024543	SAFB	100	89.603	Ursus_americanus
ENSPTRG00000010335	SAFB	88	97.849	ENSUMAG00000009734	SAFB	97	90.879	Ursus_maritimus
ENSPTRG00000010335	SAFB	73	93.077	ENSVPAG00000012043	SAFB	79	93.077	Vicugna_pacos
ENSPTRG00000010335	SAFB	100	93.145	ENSVVUG00000013720	SAFB	87	93.145	Vulpes_vulpes
ENSPTRG00000010335	SAFB	81	62.069	ENSXETG00000008755	safb	91	62.385	Xenopus_tropicalis
ENSPTRG00000010335	SAFB	78	55.294	ENSXCOG00000010246	-	66	62.687	Xiphophorus_couchianus
ENSPTRG00000010335	SAFB	95	39.265	ENSXMAG00000003458	safb	94	41.507	Xiphophorus_maculatus