EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000010779 (Gene tree)
Gene ID: 456386
Gene Symbol: POP4
Alias: -
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 9550 bases
Position: chr19:31419702-31429251
Accession: 2282
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000018461	UPF0086	PF01868.16	3.3e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000019957	-	1176	XM_016935586	ENSPTRP00000018461	220 (aa)	XP_016791075	H2QFY4

Gene Model

Click here to download ENSPTRG00000010779's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03008	Ribosome biogenesis in eukaryotes	KEGG
ptr03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000010779's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000010779	POP4	100	99.545	ENSG00000105171	POP4	100	100.000	Homo_sapiens
ENSPTRG00000010779	POP4	97	76.279	ENSAMEG00000003172	-	97	76.279	Ailuropoda_melanoleuca
ENSPTRG00000010779	POP4	99	87.615	ENSAMEG00000018329	-	99	87.615	Ailuropoda_melanoleuca
ENSPTRG00000010779	POP4	98	59.259	ENSACIG00000008358	pop4	93	64.103	Amphilophus_citrinellus
ENSPTRG00000010779	POP4	91	62.376	ENSAOCG00000010116	pop4	98	61.881	Amphiprion_ocellaris
ENSPTRG00000010779	POP4	92	61.765	ENSAPEG00000002829	pop4	86	61.275	Amphiprion_percula
ENSPTRG00000010779	POP4	92	62.255	ENSATEG00000013028	pop4	92	61.765	Anabas_testudineus
ENSPTRG00000010779	POP4	94	72.464	ENSAPLG00000014051	POP4	100	72.464	Anas_platyrhynchos
ENSPTRG00000010779	POP4	100	95.455	ENSANAG00000020295	POP4	100	95.455	Aotus_nancymaae
ENSPTRG00000010779	POP4	92	61.386	ENSACLG00000000526	pop4	91	61.386	Astatotilapia_calliptera
ENSPTRG00000010779	POP4	100	59.091	ENSAMXG00000002899	pop4	100	59.091	Astyanax_mexicanus
ENSPTRG00000010779	POP4	100	90.455	ENSBTAG00000002223	POP4	100	90.455	Bos_taurus
ENSPTRG00000010779	POP4	100	93.665	ENSCJAG00000046750	POP4	100	93.889	Callithrix_jacchus
ENSPTRG00000010779	POP4	82	91.160	ENSCAFG00000007630	POP4	99	91.160	Canis_familiaris
ENSPTRG00000010779	POP4	100	89.545	ENSCHIG00000016743	POP4	100	89.545	Capra_hircus
ENSPTRG00000010779	POP4	100	90.455	ENSTSYG00000003488	POP4	100	90.455	Carlito_syrichta
ENSPTRG00000010779	POP4	99	65.899	ENSCAPG00000011105	POP4	100	65.899	Cavia_aperea
ENSPTRG00000010779	POP4	100	87.727	ENSCPOG00000002992	POP4	100	87.727	Cavia_porcellus
ENSPTRG00000010779	POP4	100	80.000	ENSCCAG00000034244	-	100	80.000	Cebus_capucinus
ENSPTRG00000010779	POP4	100	95.455	ENSCCAG00000020285	-	100	95.455	Cebus_capucinus
ENSPTRG00000010779	POP4	100	96.818	ENSCATG00000036022	POP4	100	97.917	Cercocebus_atys
ENSPTRG00000010779	POP4	100	87.727	ENSCLAG00000013162	POP4	100	87.727	Chinchilla_lanigera
ENSPTRG00000010779	POP4	99	97.248	ENSCSAG00000004868	POP4	100	97.248	Chlorocebus_sabaeus
ENSPTRG00000010779	POP4	98	65.278	ENSCHOG00000002071	POP4	100	64.977	Choloepus_hoffmanni
ENSPTRG00000010779	POP4	100	74.545	ENSCPBG00000016132	POP4	100	74.545	Chrysemys_picta_bellii
ENSPTRG00000010779	POP4	88	33.500	ENSCING00000023871	-	96	32.000	Ciona_intestinalis
ENSPTRG00000010779	POP4	92	97.030	ENSCANG00000005924	POP4	100	97.030	Colobus_angolensis_palliatus
ENSPTRG00000010779	POP4	100	82.727	ENSCGRG00001017185	Pop4	100	83.182	Cricetulus_griseus_chok1gshd
ENSPTRG00000010779	POP4	100	82.727	ENSCGRG00000008155	Pop4	100	83.182	Cricetulus_griseus_crigri
ENSPTRG00000010779	POP4	92	54.146	ENSCSEG00000002946	pop4	92	53.431	Cynoglossus_semilaevis
ENSPTRG00000010779	POP4	92	45.588	ENSCVAG00000018602	POP4	87	45.098	Cyprinodon_variegatus
ENSPTRG00000010779	POP4	100	63.636	ENSDARG00000101472	pop4	100	63.636	Danio_rerio
ENSPTRG00000010779	POP4	100	87.273	ENSDNOG00000047663	POP4	88	87.273	Dasypus_novemcinctus
ENSPTRG00000010779	POP4	78	84.302	ENSDORG00000008577	Pop4	100	84.302	Dipodomys_ordii
ENSPTRG00000010779	POP4	69	37.342	FBgn0035831	CG8038	70	37.931	Drosophila_melanogaster
ENSPTRG00000010779	POP4	99	74.654	ENSETEG00000003607	POP4	100	74.654	Echinops_telfairi
ENSPTRG00000010779	POP4	100	42.060	ENSEBUG00000004305	pop4	100	41.631	Eptatretus_burgeri
ENSPTRG00000010779	POP4	100	44.796	ENSEBUG00000008575	pop4	100	44.344	Eptatretus_burgeri
ENSPTRG00000010779	POP4	89	48.804	ENSEBUG00000010447	pop4	81	48.325	Eptatretus_burgeri
ENSPTRG00000010779	POP4	100	88.571	ENSECAG00000020206	POP4	82	88.462	Equus_caballus
ENSPTRG00000010779	POP4	90	68.844	ENSEEUG00000013109	POP4	99	68.844	Erinaceus_europaeus
ENSPTRG00000010779	POP4	89	64.796	ENSELUG00000019812	pop4	89	64.796	Esox_lucius
ENSPTRG00000010779	POP4	100	89.091	ENSFCAG00000001619	POP4	100	89.091	Felis_catus
ENSPTRG00000010779	POP4	98	70.370	ENSFALG00000000206	POP4	96	70.370	Ficedula_albicollis
ENSPTRG00000010779	POP4	100	88.182	ENSFDAG00000017859	POP4	100	88.182	Fukomys_damarensis
ENSPTRG00000010779	POP4	90	57.500	ENSFHEG00000012745	pop4	94	55.556	Fundulus_heteroclitus
ENSPTRG00000010779	POP4	90	63.682	ENSGMOG00000000335	pop4	99	63.682	Gadus_morhua
ENSPTRG00000010779	POP4	100	69.091	ENSGALG00000041972	POP4	92	69.091	Gallus_gallus
ENSPTRG00000010779	POP4	78	52.571	ENSGAFG00000003571	pop4	96	51.724	Gambusia_affinis
ENSPTRG00000010779	POP4	92	62.319	ENSGACG00000014510	pop4	99	64.516	Gasterosteus_aculeatus
ENSPTRG00000010779	POP4	100	75.455	ENSGAGG00000024544	POP4	79	75.455	Gopherus_agassizii
ENSPTRG00000010779	POP4	99	99.541	ENSGGOG00000038346	POP4	99	99.541	Gorilla_gorilla
ENSPTRG00000010779	POP4	92	61.386	ENSHBUG00000021821	pop4	91	61.386	Haplochromis_burtoni
ENSPTRG00000010779	POP4	99	87.156	ENSHGLG00000015798	POP4	99	87.156	Heterocephalus_glaber_female
ENSPTRG00000010779	POP4	100	86.818	ENSHGLG00100009737	POP4	100	86.818	Heterocephalus_glaber_male
ENSPTRG00000010779	POP4	92	65.196	ENSHCOG00000020937	pop4	91	65.196	Hippocampus_comes
ENSPTRG00000010779	POP4	100	60.455	ENSIPUG00000013652	pop4	100	60.455	Ictalurus_punctatus
ENSPTRG00000010779	POP4	100	89.091	ENSSTOG00000011016	POP4	100	89.091	Ictidomys_tridecemlineatus
ENSPTRG00000010779	POP4	100	88.636	ENSJJAG00000013376	Pop4	100	88.636	Jaculus_jaculus
ENSPTRG00000010779	POP4	98	60.092	ENSKMAG00000012250	pop4	98	59.633	Kryptolebias_marmoratus
ENSPTRG00000010779	POP4	92	59.804	ENSLBEG00000014139	pop4	91	59.804	Labrus_bergylta
ENSPTRG00000010779	POP4	92	59.804	ENSLBEG00000018846	-	91	59.804	Labrus_bergylta
ENSPTRG00000010779	POP4	99	64.516	ENSLACG00000008581	POP4	98	64.516	Latimeria_chalumnae
ENSPTRG00000010779	POP4	100	69.545	ENSLOCG00000005597	pop4	100	69.545	Lepisosteus_oculatus
ENSPTRG00000010779	POP4	100	89.091	ENSLAFG00000000084	POP4	100	89.091	Loxodonta_africana
ENSPTRG00000010779	POP4	100	97.727	ENSMFAG00000029606	POP4	100	97.727	Macaca_fascicularis
ENSPTRG00000010779	POP4	100	96.833	ENSMMUG00000017424	POP4	100	96.833	Macaca_mulatta
ENSPTRG00000010779	POP4	100	96.833	ENSMNEG00000031374	POP4	100	96.833	Macaca_nemestrina
ENSPTRG00000010779	POP4	100	95.909	ENSMLEG00000043454	POP4	100	95.909	Mandrillus_leucophaeus
ENSPTRG00000010779	POP4	85	66.489	ENSMAMG00000011716	pop4	91	63.235	Mastacembelus_armatus
ENSPTRG00000010779	POP4	92	61.386	ENSMZEG00005002360	pop4	91	61.386	Maylandia_zebra
ENSPTRG00000010779	POP4	99	69.725	ENSMGAG00000005337	POP4	97	69.725	Meleagris_gallopavo
ENSPTRG00000010779	POP4	100	84.545	ENSMAUG00000020110	Pop4	100	84.545	Mesocricetus_auratus
ENSPTRG00000010779	POP4	99	87.156	ENSMICG00000035730	POP4	98	87.156	Microcebus_murinus
ENSPTRG00000010779	POP4	92	61.881	ENSMMOG00000015321	pop4	91	61.881	Mola_mola
ENSPTRG00000010779	POP4	98	78.704	ENSMODG00000029406	POP4	94	78.704	Monodelphis_domestica
ENSPTRG00000010779	POP4	96	61.792	ENSMALG00000012571	pop4	92	63.547	Monopterus_albus
ENSPTRG00000010779	POP4	100	82.805	MGP_CAROLIEiJ_G0029600	Pop4	100	82.805	Mus_caroli
ENSPTRG00000010779	POP4	100	83.258	ENSMUSG00000030423	Pop4	100	82.805	Mus_musculus
ENSPTRG00000010779	POP4	100	82.727	MGP_SPRETEiJ_G0030699	Pop4	100	82.727	Mus_spretus
ENSPTRG00000010779	POP4	100	88.636	ENSMPUG00000008041	-	100	88.636	Mustela_putorius_furo
ENSPTRG00000010779	POP4	100	75.566	ENSMPUG00000008063	-	100	75.566	Mustela_putorius_furo
ENSPTRG00000010779	POP4	99	71.233	ENSMLUG00000010774	POP4	99	71.233	Myotis_lucifugus
ENSPTRG00000010779	POP4	57	85.600	ENSMEUG00000003636	-	100	85.600	Notamacropus_eugenii
ENSPTRG00000010779	POP4	90	92.929	ENSOPRG00000004736	POP4	99	92.929	Ochotona_princeps
ENSPTRG00000010779	POP4	99	87.097	ENSODEG00000013025	POP4	100	87.264	Octodon_degus
ENSPTRG00000010779	POP4	92	60.891	ENSONIG00000003458	pop4	90	60.891	Oreochromis_niloticus
ENSPTRG00000010779	POP4	100	91.364	ENSOCUG00000015974	POP4	100	91.364	Oryctolagus_cuniculus
ENSPTRG00000010779	POP4	91	60.396	ENSORLG00000020317	pop4	91	59.901	Oryzias_latipes
ENSPTRG00000010779	POP4	92	60.294	ENSORLG00015011624	pop4	91	59.804	Oryzias_latipes_hsok
ENSPTRG00000010779	POP4	92	61.951	ENSOMEG00000002538	pop4	91	60.784	Oryzias_melastigma
ENSPTRG00000010779	POP4	99	88.073	ENSOGAG00000011168	POP4	99	88.073	Otolemur_garnettii
ENSPTRG00000010779	POP4	100	89.140	ENSOARG00000004041	POP4	100	89.140	Ovis_aries
ENSPTRG00000010779	POP4	100	100.000	ENSPPAG00000040372	POP4	100	100.000	Pan_paniscus
ENSPTRG00000010779	POP4	100	89.091	ENSPPRG00000010502	POP4	100	89.091	Panthera_pardus
ENSPTRG00000010779	POP4	100	88.636	ENSPTIG00000016598	POP4	100	88.636	Panthera_tigris_altaica
ENSPTRG00000010779	POP4	100	97.727	ENSPANG00000008546	POP4	100	97.727	Papio_anubis
ENSPTRG00000010779	POP4	89	72.000	ENSPKIG00000004468	pop4	87	70.707	Paramormyrops_kingsleyae
ENSPTRG00000010779	POP4	100	75.909	ENSPSIG00000015690	POP4	100	79.208	Pelodiscus_sinensis
ENSPTRG00000010779	POP4	91	57.561	ENSPMGG00000008608	pop4	98	58.049	Periophthalmus_magnuspinnatus
ENSPTRG00000010779	POP4	99	69.266	ENSPEMG00000019982	-	100	69.266	Peromyscus_maniculatus_bairdii
ENSPTRG00000010779	POP4	100	83.182	ENSPEMG00000014034	-	96	83.182	Peromyscus_maniculatus_bairdii
ENSPTRG00000010779	POP4	82	58.376	ENSPMAG00000006265	pop4	99	58.376	Petromyzon_marinus
ENSPTRG00000010779	POP4	100	78.182	ENSPCIG00000024738	POP4	95	78.182	Phascolarctos_cinereus
ENSPTRG00000010779	POP4	92	60.784	ENSPFOG00000000925	pop4	91	60.099	Poecilia_formosa
ENSPTRG00000010779	POP4	92	60.784	ENSPLAG00000003161	pop4	91	60.099	Poecilia_latipinna
ENSPTRG00000010779	POP4	92	60.784	ENSPMEG00000002475	pop4	91	60.099	Poecilia_mexicana
ENSPTRG00000010779	POP4	90	60.500	ENSPREG00000022403	pop4	86	59.296	Poecilia_reticulata
ENSPTRG00000010779	POP4	100	99.545	ENSPPYG00000009805	POP4	100	99.545	Pongo_abelii
ENSPTRG00000010779	POP4	99	82.648	ENSPCAG00000007737	POP4	99	82.648	Procavia_capensis
ENSPTRG00000010779	POP4	100	90.000	ENSPCOG00000018055	POP4	100	90.000	Propithecus_coquereli
ENSPTRG00000010779	POP4	100	87.727	ENSPVAG00000006069	POP4	100	87.727	Pteropus_vampyrus
ENSPTRG00000010779	POP4	92	61.881	ENSPNYG00000020038	pop4	91	61.881	Pundamilia_nyererei
ENSPTRG00000010779	POP4	100	62.273	ENSPNAG00000005591	pop4	100	62.273	Pygocentrus_nattereri
ENSPTRG00000010779	POP4	100	84.163	ENSRNOG00000027646	Pop4	100	84.163	Rattus_norvegicus
ENSPTRG00000010779	POP4	80	94.857	ENSRBIG00000044769	POP4	90	97.122	Rhinopithecus_bieti
ENSPTRG00000010779	POP4	100	97.273	ENSRROG00000028903	POP4	100	97.273	Rhinopithecus_roxellana
ENSPTRG00000010779	POP4	57	34.532	YBR257W	-	50	34.532	Saccharomyces_cerevisiae
ENSPTRG00000010779	POP4	100	95.909	ENSSBOG00000032445	POP4	100	95.909	Saimiri_boliviensis_boliviensis
ENSPTRG00000010779	POP4	99	79.358	ENSSHAG00000016888	POP4	99	79.358	Sarcophilus_harrisii
ENSPTRG00000010779	POP4	92	67.327	ENSSFOG00015014556	pop4	90	66.832	Scleropages_formosus
ENSPTRG00000010779	POP4	92	64.390	ENSSMAG00000016611	pop4	95	63.902	Scophthalmus_maximus
ENSPTRG00000010779	POP4	92	62.255	ENSSDUG00000019865	pop4	82	61.765	Seriola_dumerili
ENSPTRG00000010779	POP4	92	62.255	ENSSLDG00000001763	pop4	91	61.765	Seriola_lalandi_dorsalis
ENSPTRG00000010779	POP4	99	86.636	ENSSARG00000004748	POP4	100	86.636	Sorex_araneus
ENSPTRG00000010779	POP4	92	63.902	ENSSPAG00000014364	pop4	91	63.235	Stegastes_partitus
ENSPTRG00000010779	POP4	100	90.000	ENSSSCG00000002854	POP4	100	90.000	Sus_scrofa
ENSPTRG00000010779	POP4	91	75.000	ENSTGUG00000008953	POP4	100	75.000	Taeniopygia_guttata
ENSPTRG00000010779	POP4	92	60.591	ENSTNIG00000006401	pop4	100	59.113	Tetraodon_nigroviridis
ENSPTRG00000010779	POP4	100	86.878	ENSTBEG00000002194	POP4	100	88.688	Tupaia_belangeri
ENSPTRG00000010779	POP4	100	90.000	ENSTTRG00000005882	POP4	100	90.000	Tursiops_truncatus
ENSPTRG00000010779	POP4	100	88.636	ENSUAMG00000003049	-	100	88.636	Ursus_americanus
ENSPTRG00000010779	POP4	100	88.636	ENSUMAG00000007522	-	100	88.636	Ursus_maritimus
ENSPTRG00000010779	POP4	92	89.604	ENSVVUG00000016876	-	71	89.604	Vulpes_vulpes
ENSPTRG00000010779	POP4	98	65.741	ENSXETG00000017598	pop4	98	64.815	Xenopus_tropicalis
ENSPTRG00000010779	POP4	90	61.386	ENSXCOG00000017695	pop4	86	59.701	Xiphophorus_couchianus
ENSPTRG00000010779	POP4	90	61.386	ENSXMAG00000013862	pop4	86	59.701	Xiphophorus_maculatus