EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000010852 (Gene tree)
Gene ID: 468839
Gene Symbol: RBM42
Alias: -
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 8960 bases
Position: chr19:37563714-37572673
Accession: 2271
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000069244	RRM_1	PF00076.22	9.8e-18	1	1
ENSPTRP00000083609	RRM_1	PF00076.22	1.1e-17	1	1
ENSPTRP00000080649	RRM_1	PF00076.22	1.2e-17	1	1
ENSPTRP00000018580	RRM_1	PF00076.22	1.2e-17	1	1
ENSPTRP00000085185	RRM_1	PF00076.22	1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000093830	-	1625	XM_001160516	ENSPTRP00000083609	451 (aa)	XP_001160516	A0A2I3T321
ENSPTRT00000089314	-	1281	-	ENSPTRP00000069244	426 (aa)	-	A0A2I3RXA0
ENSPTRT00000100246	-	1425	-	ENSPTRP00000080649	474 (aa)	-	A0A2I3SUL5
ENSPTRT00000087252	-	555	-	ENSPTRP00000085185	184 (aa)	-	A0A2I3T7G0
ENSPTRT00000020093	-	1707	XM_001160564	ENSPTRP00000018580	480 (aa)	XP_001160564	H2QG34
ENSPTRT00000085539	-	1161	-	ENSPTRP00000086060	386 (aa)	-	A0A2I3T9Y2

Gene Model

Click here to download ENSPTRG00000010852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000010852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000010852	RBM42	100	100.000	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSPTRG00000010852	RBM42	100	97.718	ENSAMEG00000000524	RBM42	100	97.718	Ailuropoda_melanoleuca
ENSPTRG00000010852	RBM42	100	100.000	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSPTRG00000010852	RBM42	100	100.000	ENSBTAG00000013440	RBM42	100	98.125	Bos_taurus
ENSPTRG00000010852	RBM42	100	100.000	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSPTRG00000010852	RBM42	100	100.000	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSPTRG00000010852	RBM42	100	100.000	ENSCHIG00000009518	RBM42	100	98.226	Capra_hircus
ENSPTRG00000010852	RBM42	100	100.000	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSPTRG00000010852	RBM42	81	98.446	ENSCAPG00000009566	RBM42	99	98.446	Cavia_aperea
ENSPTRG00000010852	RBM42	100	100.000	ENSCPOG00000012365	RBM42	99	98.004	Cavia_porcellus
ENSPTRG00000010852	RBM42	100	100.000	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSPTRG00000010852	RBM42	100	100.000	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSPTRG00000010852	RBM42	100	100.000	ENSCLAG00000012865	RBM42	99	97.339	Chinchilla_lanigera
ENSPTRG00000010852	RBM42	100	100.000	ENSCSAG00000004422	RBM42	100	99.778	Chlorocebus_sabaeus
ENSPTRG00000010852	RBM42	99	90.042	ENSCANG00000030272	RBM42	100	88.542	Colobus_angolensis_palliatus
ENSPTRG00000010852	RBM42	100	100.000	ENSCGRG00001018540	Rbm42	99	97.053	Cricetulus_griseus_chok1gshd
ENSPTRG00000010852	RBM42	100	100.000	ENSDNOG00000037397	RBM42	100	96.894	Dasypus_novemcinctus
ENSPTRG00000010852	RBM42	97	100.000	ENSDORG00000013001	Rbm42	99	96.849	Dipodomys_ordii
ENSPTRG00000010852	RBM42	91	92.754	ENSETEG00000007878	RBM42	71	92.857	Echinops_telfairi
ENSPTRG00000010852	RBM42	100	98.004	ENSEASG00005001074	RBM42	100	98.004	Equus_asinus_asinus
ENSPTRG00000010852	RBM42	100	98.004	ENSECAG00000018215	RBM42	100	98.004	Equus_caballus
ENSPTRG00000010852	RBM42	100	100.000	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSPTRG00000010852	RBM42	100	100.000	ENSFDAG00000007440	RBM42	99	96.468	Fukomys_damarensis
ENSPTRG00000010852	RBM42	73	97.183	ENSGAGG00000014805	RBM42	50	92.086	Gopherus_agassizii
ENSPTRG00000010852	RBM42	100	100.000	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSPTRG00000010852	RBM42	100	96.008	ENSHGLG00000008418	RBM42	99	96.008	Heterocephalus_glaber_female
ENSPTRG00000010852	RBM42	100	96.008	ENSHGLG00100018667	RBM42	99	96.008	Heterocephalus_glaber_male
ENSPTRG00000010852	RBM42	100	100.000	ENSSTOG00000013050	RBM42	99	98.226	Ictidomys_tridecemlineatus
ENSPTRG00000010852	RBM42	100	100.000	ENSJJAG00000010421	Rbm42	99	96.617	Jaculus_jaculus
ENSPTRG00000010852	RBM42	98	94.904	ENSLAFG00000014993	RBM42	99	91.667	Loxodonta_africana
ENSPTRG00000010852	RBM42	100	100.000	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSPTRG00000010852	RBM42	100	100.000	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSPTRG00000010852	RBM42	100	100.000	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSPTRG00000010852	RBM42	100	100.000	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000010852	RBM42	100	100.000	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSPTRG00000010852	RBM42	100	100.000	ENSMOCG00000000405	Rbm42	99	96.639	Microtus_ochrogaster
ENSPTRG00000010852	RBM42	84	100.000	ENSMODG00000013957	RBM42	82	82.590	Monodelphis_domestica
ENSPTRG00000010852	RBM42	100	100.000	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.269	Mus_caroli
ENSPTRG00000010852	RBM42	100	100.000	ENSMUSG00000036733	Rbm42	99	97.269	Mus_musculus
ENSPTRG00000010852	RBM42	100	100.000	MGP_PahariEiJ_G0012770	Rbm42	99	97.269	Mus_pahari
ENSPTRG00000010852	RBM42	100	100.000	MGP_SPRETEiJ_G0030632	Rbm42	99	97.269	Mus_spretus
ENSPTRG00000010852	RBM42	100	98.226	ENSMPUG00000006288	RBM42	100	98.226	Mustela_putorius_furo
ENSPTRG00000010852	RBM42	100	100.000	ENSMLUG00000011334	RBM42	100	96.667	Myotis_lucifugus
ENSPTRG00000010852	RBM42	100	100.000	ENSNGAG00000019698	Rbm42	99	96.849	Nannospalax_galili
ENSPTRG00000010852	RBM42	85	86.066	ENSNLEG00000011272	-	94	92.458	Nomascus_leucogenys
ENSPTRG00000010852	RBM42	96	83.406	ENSMEUG00000016300	RBM42	100	81.224	Notamacropus_eugenii
ENSPTRG00000010852	RBM42	100	100.000	ENSOPRG00000001229	RBM42	100	91.875	Ochotona_princeps
ENSPTRG00000010852	RBM42	100	100.000	ENSODEG00000013705	RBM42	99	97.561	Octodon_degus
ENSPTRG00000010852	RBM42	100	100.000	ENSOCUG00000003337	RBM42	100	98.448	Oryctolagus_cuniculus
ENSPTRG00000010852	RBM42	100	100.000	ENSOGAG00000004144	RBM42	100	97.292	Otolemur_garnettii
ENSPTRG00000010852	RBM42	99	100.000	ENSOARG00000004926	RBM42	98	92.693	Ovis_aries
ENSPTRG00000010852	RBM42	100	100.000	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSPTRG00000010852	RBM42	100	100.000	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSPTRG00000010852	RBM42	100	100.000	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSPTRG00000010852	RBM42	100	100.000	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSPTRG00000010852	RBM42	100	100.000	ENSPEMG00000012065	Rbm42	99	97.689	Peromyscus_maniculatus_bairdii
ENSPTRG00000010852	RBM42	100	100.000	ENSPCIG00000015737	RBM42	100	81.602	Phascolarctos_cinereus
ENSPTRG00000010852	RBM42	100	100.000	ENSPPYG00000009871	RBM42	100	98.969	Pongo_abelii
ENSPTRG00000010852	RBM42	90	100.000	ENSPCAG00000013053	RBM42	100	84.583	Procavia_capensis
ENSPTRG00000010852	RBM42	97	75.870	ENSPCOG00000020672	RBM42	81	99.099	Propithecus_coquereli
ENSPTRG00000010852	RBM42	100	100.000	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSPTRG00000010852	RBM42	100	100.000	ENSPVAG00000012815	RBM42	100	97.708	Pteropus_vampyrus
ENSPTRG00000010852	RBM42	100	100.000	ENSRNOG00000024278	Rbm42	99	97.479	Rattus_norvegicus
ENSPTRG00000010852	RBM42	100	100.000	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSPTRG00000010852	RBM42	100	100.000	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000010852	RBM42	90	98.956	ENSSBOG00000030666	RBM42	100	99.754	Saimiri_boliviensis_boliviensis
ENSPTRG00000010852	RBM42	100	87.708	ENSSARG00000010724	RBM42	100	87.708	Sorex_araneus
ENSPTRG00000010852	RBM42	100	100.000	ENSSSCG00000002905	RBM42	100	97.561	Sus_scrofa
ENSPTRG00000010852	RBM42	100	100.000	ENSUAMG00000020711	RBM42	100	97.917	Ursus_americanus
ENSPTRG00000010852	RBM42	100	100.000	ENSUMAG00000020223	RBM42	100	97.917	Ursus_maritimus
ENSPTRG00000010852	RBM42	100	100.000	ENSVVUG00000015117	RBM42	100	98.004	Vulpes_vulpes