EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000011149 (Gene tree)
Gene ID: 456124
Gene Symbol: ERCC2
Alias: -
Full Name: ERCC excision repair 2%2C TFIIH core complex helicase subunit
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 18970 bases
Position: chr19:47466900-47485869
Accession: 7479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000092255	ResIII	PF04851.15	9.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000094760	-	2049	-	ENSPTRP00000092255	682 (aa)	-	A0A2I3TSP5
ENSPTRT00000101743	-	2220	-	ENSPTRP00000085902	739 (aa)	-	A0A2I3T9J7
ENSPTRT00000100344	-	2332	XM_016934073	ENSPTRP00000079029	760 (aa)	XP_016789562	G2HHJ3
ENSPTRT00000084400	-	1218	-	ENSPTRP00000067858	405 (aa)	-	A0A2I3RT21
ENSPTRT00000020720	-	2283	XM_009435754	ENSPTRP00000019135	760 (aa)	XP_009434029	H2QGL4

Gene Model

Click here to download ENSPTRG00000011149's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03022	Basal transcription factors	KEGG
ptr03420	Nucleotide excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000011149's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000011149	ERCC2	100	99.853	ENSG00000104884	ERCC2	100	99.853	Homo_sapiens
ENSPTRG00000011149	ERCC2	97	84.314	ENSAPOG00000000375	ercc2	99	84.314	Acanthochromis_polyacanthus
ENSPTRG00000011149	ERCC2	99	84.536	ENSACIG00000008002	ercc2	99	84.536	Amphilophus_citrinellus
ENSPTRG00000011149	ERCC2	97	82.883	ENSAOCG00000016153	ercc2	99	82.883	Amphiprion_ocellaris
ENSPTRG00000011149	ERCC2	97	82.883	ENSAPEG00000016712	ercc2	99	82.883	Amphiprion_percula
ENSPTRG00000011149	ERCC2	99	84.288	ENSATEG00000005268	ercc2	99	84.288	Anabas_testudineus
ENSPTRG00000011149	ERCC2	100	99.560	ENSANAG00000022694	ERCC2	100	99.560	Aotus_nancymaae
ENSPTRG00000011149	ERCC2	97	84.917	ENSACLG00000017573	ercc2	99	84.917	Astatotilapia_calliptera
ENSPTRG00000011149	ERCC2	97	84.639	ENSAMXG00000009052	ercc2	99	84.639	Astyanax_mexicanus
ENSPTRG00000011149	ERCC2	100	99.560	ENSCJAG00000012716	ERCC2	100	99.560	Callithrix_jacchus
ENSPTRG00000011149	ERCC2	81	37.931	ENSCJAG00000001292	BRIP1	65	37.931	Callithrix_jacchus
ENSPTRG00000011149	ERCC2	99	98.971	ENSCAFG00020011390	ERCC2	99	98.971	Canis_lupus_dingo
ENSPTRG00000011149	ERCC2	97	81.212	ENSTSYG00000026723	ERCC2	99	81.212	Carlito_syrichta
ENSPTRG00000011149	ERCC2	99	97.080	ENSCCAG00000019831	ERCC2	99	97.080	Cebus_capucinus
ENSPTRG00000011149	ERCC2	100	100.000	ENSCANG00000040683	ERCC2	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000011149	ERCC2	97	79.819	ENSCSEG00000006041	ercc2	99	79.819	Cynoglossus_semilaevis
ENSPTRG00000011149	ERCC2	99	95.735	ENSEASG00005013856	ERCC2	99	95.735	Equus_asinus_asinus
ENSPTRG00000011149	ERCC2	98	83.759	ENSELUG00000018055	ercc2	100	83.759	Esox_lucius
ENSPTRG00000011149	ERCC2	100	98.827	ENSFCAG00000002679	ERCC2	100	98.827	Felis_catus
ENSPTRG00000011149	ERCC2	99	84.265	ENSFHEG00000000072	ercc2	99	84.265	Fundulus_heteroclitus
ENSPTRG00000011149	ERCC2	100	84.050	ENSGAGG00000009493	ERCC2	100	84.050	Gopherus_agassizii
ENSPTRG00000011149	ERCC2	100	100.000	ENSGGOG00000015842	ERCC2	100	100.000	Gorilla_gorilla
ENSPTRG00000011149	ERCC2	97	84.108	ENSHBUG00000002187	ercc2	99	84.108	Haplochromis_burtoni
ENSPTRG00000011149	ERCC2	99	83.260	ENSLBEG00000010573	ercc2	92	83.382	Labrus_bergylta
ENSPTRG00000011149	ERCC2	100	100.000	ENSMFAG00000037898	ERCC2	100	100.000	Macaca_fascicularis
ENSPTRG00000011149	ERCC2	100	100.000	ENSMMUG00000014419	ERCC2	100	100.000	Macaca_mulatta
ENSPTRG00000011149	ERCC2	100	100.000	ENSMNEG00000042641	ERCC2	100	100.000	Macaca_nemestrina
ENSPTRG00000011149	ERCC2	82	39.655	ENSMNEG00000040728	BRIP1	57	39.655	Macaca_nemestrina
ENSPTRG00000011149	ERCC2	99	100.000	ENSMLEG00000043492	ERCC2	99	100.000	Mandrillus_leucophaeus
ENSPTRG00000011149	ERCC2	99	84.389	ENSMAMG00000016724	ercc2	99	84.389	Mastacembelus_armatus
ENSPTRG00000011149	ERCC2	97	84.940	ENSMZEG00005024441	ercc2	99	84.940	Maylandia_zebra
ENSPTRG00000011149	ERCC2	100	98.827	ENSMICG00000000635	ERCC2	100	98.827	Microcebus_murinus
ENSPTRG00000011149	ERCC2	99	81.443	ENSMMOG00000005162	ercc2	99	81.443	Mola_mola
ENSPTRG00000011149	ERCC2	99	83.358	ENSMALG00000005990	ercc2	99	83.358	Monopterus_albus
ENSPTRG00000011149	ERCC2	99	98.091	MGP_CAROLIEiJ_G0029287	Ercc2	99	98.091	Mus_caroli
ENSPTRG00000011149	ERCC2	99	98.091	ENSMUSG00000030400	Ercc2	99	98.091	Mus_musculus
ENSPTRG00000011149	ERCC2	99	98.091	MGP_PahariEiJ_G0021147	Ercc2	99	98.091	Mus_pahari
ENSPTRG00000011149	ERCC2	99	97.944	MGP_SPRETEiJ_G0030371	Ercc2	99	97.944	Mus_spretus
ENSPTRG00000011149	ERCC2	100	100.000	ENSPPAG00000044005	ERCC2	100	100.000	Pan_paniscus
ENSPTRG00000011149	ERCC2	99	93.235	ENSPPRG00000000507	ERCC2	99	93.676	Panthera_pardus
ENSPTRG00000011149	ERCC2	99	100.000	ENSPANG00000032195	ERCC2	99	100.000	Papio_anubis
ENSPTRG00000011149	ERCC2	99	79.736	ENSPKIG00000006883	ercc2	98	79.736	Paramormyrops_kingsleyae
ENSPTRG00000011149	ERCC2	97	83.735	ENSPMGG00000000223	ercc2	99	83.735	Periophthalmus_magnuspinnatus
ENSPTRG00000011149	ERCC2	99	84.288	ENSPLAG00000002626	ercc2	99	84.412	Poecilia_latipinna
ENSPTRG00000011149	ERCC2	99	84.288	ENSPMEG00000002858	ercc2	99	84.412	Poecilia_mexicana
ENSPTRG00000011149	ERCC2	99	79.736	ENSPREG00000019280	ercc2	99	79.853	Poecilia_reticulata
ENSPTRG00000011149	ERCC2	97	84.234	ENSPNYG00000022007	ercc2	99	84.234	Pundamilia_nyererei
ENSPTRG00000011149	ERCC2	98	84.060	ENSPNAG00000010434	ercc2	100	84.060	Pygocentrus_nattereri
ENSPTRG00000011149	ERCC2	100	100.000	ENSRROG00000040423	ERCC2	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000011149	ERCC2	82	37.931	ENSSBOG00000035665	BRIP1	57	37.931	Saimiri_boliviensis_boliviensis
ENSPTRG00000011149	ERCC2	99	99.559	ENSSBOG00000030257	ERCC2	99	99.559	Saimiri_boliviensis_boliviensis
ENSPTRG00000011149	ERCC2	97	78.261	ENSSMAG00000019720	ercc2	99	78.261	Scophthalmus_maximus
ENSPTRG00000011149	ERCC2	97	83.735	ENSSDUG00000002397	ercc2	99	83.735	Seriola_dumerili
ENSPTRG00000011149	ERCC2	97	83.584	ENSSLDG00000020353	ercc2	99	83.584	Seriola_lalandi_dorsalis
ENSPTRG00000011149	ERCC2	99	84.536	ENSSPAG00000002074	ercc2	99	84.536	Stegastes_partitus
ENSPTRG00000011149	ERCC2	99	84.094	ENSTRUG00000007303	ercc2	99	84.094	Takifugu_rubripes
ENSPTRG00000011149	ERCC2	99	98.382	ENSUAMG00000019562	ERCC2	99	98.382	Ursus_americanus
ENSPTRG00000011149	ERCC2	99	80.029	ENSXMAG00000003922	ercc2	99	80.147	Xiphophorus_maculatus