EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000011169 (Gene tree)
Gene ID: 456142
Gene Symbol: SYMPK
Alias: -
Full Name: symplekin
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 48990 bases
Position: chr19:47933198-47982187
Accession: 2240
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000066573	Symplekin_C	PF12295.8	1.1e-74	1	1
ENSPTRP00000019175	Symplekin_C	PF12295.8	8.5e-74	1	1
ENSPTRP00000064431	Symplekin_C	PF12295.8	8.8e-74	1	1
ENSPTRP00000089000	Symplekin_C	PF12295.8	5.5e-20	1	1
ENSPTRP00000073812	Symplekin_C	PF12295.8	2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000020762	-	4110	XM_009435848	ENSPTRP00000019175	1274 (aa)	XP_009434123	H2QGM1
ENSPTRT00000098779	-	3933	-	ENSPTRP00000064431	1310 (aa)	-	A0A2I3RIF7
ENSPTRT00000078004	-	2322	-	ENSPTRP00000089000	773 (aa)	-	A0A2I3TJD6
ENSPTRT00000096064	-	1866	-	ENSPTRP00000066573	621 (aa)	-	A0A2I3RQH4
ENSPTRT00000104710	-	3165	-	ENSPTRP00000073812	1054 (aa)	-	A0A2I3S9U2

Gene Model

Click here to download ENSPTRG00000011169's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03015	mRNA surveillance pathway	KEGG
ptr04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000011169's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000011169	SYMPK	100	99.843	ENSG00000125755	SYMPK	100	100.000	Homo_sapiens
ENSPTRG00000011169	SYMPK	94	73.735	ENSAPOG00000015934	sympk	97	73.870	Acanthochromis_polyacanthus
ENSPTRG00000011169	SYMPK	100	98.400	ENSAMEG00000000680	SYMPK	100	97.017	Ailuropoda_melanoleuca
ENSPTRG00000011169	SYMPK	94	74.038	ENSACIG00000006357	sympk	92	74.840	Amphilophus_citrinellus
ENSPTRG00000011169	SYMPK	94	73.379	ENSAOCG00000024124	sympk	92	74.656	Amphiprion_ocellaris
ENSPTRG00000011169	SYMPK	94	73.288	ENSAPEG00000003465	sympk	90	74.301	Amphiprion_percula
ENSPTRG00000011169	SYMPK	94	73.931	ENSATEG00000008472	sympk	91	74.350	Anabas_testudineus
ENSPTRG00000011169	SYMPK	94	85.103	ENSACAG00000004126	SYMPK	99	78.956	Anolis_carolinensis
ENSPTRG00000011169	SYMPK	100	98.587	ENSANAG00000021087	SYMPK	100	99.200	Aotus_nancymaae
ENSPTRG00000011169	SYMPK	94	73.562	ENSACLG00000001813	sympk	91	74.506	Astatotilapia_calliptera
ENSPTRG00000011169	SYMPK	94	72.715	ENSAMXG00000013677	sympk	92	73.810	Astyanax_mexicanus
ENSPTRG00000011169	SYMPK	100	96.546	ENSBTAG00000012101	SYMPK	100	96.546	Bos_taurus
ENSPTRG00000011169	SYMPK	86	31.948	WBGene00017797	symk-1	80	30.541	Caenorhabditis_elegans
ENSPTRG00000011169	SYMPK	100	99.200	ENSCJAG00000012172	SYMPK	99	97.460	Callithrix_jacchus
ENSPTRG00000011169	SYMPK	100	97.259	ENSCAFG00000004376	SYMPK	100	97.259	Canis_familiaris
ENSPTRG00000011169	SYMPK	100	97.259	ENSCAFG00020001815	SYMPK	100	97.259	Canis_lupus_dingo
ENSPTRG00000011169	SYMPK	100	96.860	ENSCHIG00000026784	SYMPK	100	96.860	Capra_hircus
ENSPTRG00000011169	SYMPK	100	98.400	ENSTSYG00000006268	SYMPK	100	96.890	Carlito_syrichta
ENSPTRG00000011169	SYMPK	91	96.454	ENSCAPG00000005112	SYMPK	96	95.403	Cavia_aperea
ENSPTRG00000011169	SYMPK	100	99.200	ENSCPOG00000010434	SYMPK	100	91.738	Cavia_porcellus
ENSPTRG00000011169	SYMPK	100	98.901	ENSCCAG00000036309	SYMPK	100	99.200	Cebus_capucinus
ENSPTRG00000011169	SYMPK	100	99.372	ENSCATG00000045107	SYMPK	100	100.000	Cercocebus_atys
ENSPTRG00000011169	SYMPK	100	100.000	ENSCLAG00000001206	SYMPK	100	96.627	Chinchilla_lanigera
ENSPTRG00000011169	SYMPK	100	99.451	ENSCSAG00000003115	SYMPK	100	99.451	Chlorocebus_sabaeus
ENSPTRG00000011169	SYMPK	72	100.000	ENSCHOG00000012456	SYMPK	81	100.000	Choloepus_hoffmanni
ENSPTRG00000011169	SYMPK	100	88.095	ENSCPBG00000007170	SYMPK	98	84.455	Chrysemys_picta_bellii
ENSPTRG00000011169	SYMPK	94	46.531	ENSCING00000021232	-	96	49.153	Ciona_intestinalis
ENSPTRG00000011169	SYMPK	94	44.933	ENSCSAVG00000005154	-	100	48.071	Ciona_savignyi
ENSPTRG00000011169	SYMPK	100	98.873	ENSCANG00000040907	SYMPK	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000011169	SYMPK	100	99.200	ENSCGRG00001010086	Sympk	100	91.713	Cricetulus_griseus_chok1gshd
ENSPTRG00000011169	SYMPK	94	74.074	ENSCSEG00000016802	sympk	91	74.170	Cynoglossus_semilaevis
ENSPTRG00000011169	SYMPK	73	82.262	ENSCVAG00000015093	sympk	81	82.080	Cyprinodon_variegatus
ENSPTRG00000011169	SYMPK	94	72.428	ENSDARG00000059553	sympk	88	74.091	Danio_rerio
ENSPTRG00000011169	SYMPK	99	95.659	ENSDNOG00000016149	SYMPK	99	95.031	Dasypus_novemcinctus
ENSPTRG00000011169	SYMPK	93	34.450	FBgn0037371	Sym	95	36.729	Drosophila_melanogaster
ENSPTRG00000011169	SYMPK	67	79.600	ENSETEG00000015995	-	54	95.541	Echinops_telfairi
ENSPTRG00000011169	SYMPK	90	60.000	ENSEBUG00000000387	sympk	89	62.558	Eptatretus_burgeri
ENSPTRG00000011169	SYMPK	100	97.255	ENSEASG00005014227	SYMPK	100	97.255	Equus_asinus_asinus
ENSPTRG00000011169	SYMPK	100	97.255	ENSECAG00000008163	SYMPK	100	97.255	Equus_caballus
ENSPTRG00000011169	SYMPK	69	93.333	ENSEEUG00000000270	-	81	93.333	Erinaceus_europaeus
ENSPTRG00000011169	SYMPK	94	73.425	ENSELUG00000000850	sympk	88	75.380	Esox_lucius
ENSPTRG00000011169	SYMPK	100	98.927	ENSFCAG00000007337	SYMPK	100	97.410	Felis_catus
ENSPTRG00000011169	SYMPK	100	99.200	ENSFDAG00000011272	SYMPK	100	96.392	Fukomys_damarensis
ENSPTRG00000011169	SYMPK	94	73.626	ENSFHEG00000010274	sympk	90	75.000	Fundulus_heteroclitus
ENSPTRG00000011169	SYMPK	94	71.389	ENSGMOG00000002357	sympk	99	72.970	Gadus_morhua
ENSPTRG00000011169	SYMPK	94	74.725	ENSGAFG00000010976	sympk	91	75.158	Gambusia_affinis
ENSPTRG00000011169	SYMPK	94	73.140	ENSGACG00000002735	sympk	98	74.319	Gasterosteus_aculeatus
ENSPTRG00000011169	SYMPK	90	65.352	ENSGAGG00000012538	-	88	84.885	Gopherus_agassizii
ENSPTRG00000011169	SYMPK	100	99.765	ENSGGOG00000003410	SYMPK	100	100.000	Gorilla_gorilla
ENSPTRG00000011169	SYMPK	94	73.699	ENSHBUG00000023564	sympk	91	74.596	Haplochromis_burtoni
ENSPTRG00000011169	SYMPK	100	99.200	ENSHGLG00000005228	SYMPK	100	91.922	Heterocephalus_glaber_female
ENSPTRG00000011169	SYMPK	100	99.200	ENSHGLG00100018571	SYMPK	100	91.471	Heterocephalus_glaber_male
ENSPTRG00000011169	SYMPK	94	67.764	ENSHCOG00000017400	sympk	91	70.394	Hippocampus_comes
ENSPTRG00000011169	SYMPK	94	73.598	ENSIPUG00000024020	SYMPK	90	73.925	Ictalurus_punctatus
ENSPTRG00000011169	SYMPK	100	99.200	ENSSTOG00000001534	SYMPK	100	97.096	Ictidomys_tridecemlineatus
ENSPTRG00000011169	SYMPK	100	98.400	ENSJJAG00000006633	Sympk	100	94.910	Jaculus_jaculus
ENSPTRG00000011169	SYMPK	94	73.800	ENSKMAG00000016292	sympk	98	70.515	Kryptolebias_marmoratus
ENSPTRG00000011169	SYMPK	97	71.900	ENSLBEG00000027913	sympk	99	69.980	Labrus_bergylta
ENSPTRG00000011169	SYMPK	90	77.344	ENSLACG00000016497	SYMPK	100	71.593	Latimeria_chalumnae
ENSPTRG00000011169	SYMPK	100	96.708	ENSLAFG00000008726	SYMPK	100	96.708	Loxodonta_africana
ENSPTRG00000011169	SYMPK	80	98.196	ENSMFAG00000030093	-	90	98.196	Macaca_fascicularis
ENSPTRG00000011169	SYMPK	100	99.372	ENSMMUG00000015428	SYMPK	100	100.000	Macaca_mulatta
ENSPTRG00000011169	SYMPK	100	99.215	ENSMNEG00000019439	SYMPK	100	100.000	Macaca_nemestrina
ENSPTRG00000011169	SYMPK	100	99.294	ENSMLEG00000040508	SYMPK	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000011169	SYMPK	94	73.288	ENSMAMG00000010486	sympk	90	74.345	Mastacembelus_armatus
ENSPTRG00000011169	SYMPK	94	73.562	ENSMZEG00005014146	sympk	91	74.506	Maylandia_zebra
ENSPTRG00000011169	SYMPK	100	92.572	ENSMAUG00000015657	Sympk	100	92.416	Mesocricetus_auratus
ENSPTRG00000011169	SYMPK	100	97.647	ENSMICG00000001871	SYMPK	100	97.647	Microcebus_murinus
ENSPTRG00000011169	SYMPK	100	93.920	ENSMOCG00000008388	Sympk	100	93.297	Microtus_ochrogaster
ENSPTRG00000011169	SYMPK	92	72.361	ENSMMOG00000019227	sympk	94	73.073	Mola_mola
ENSPTRG00000011169	SYMPK	97	89.862	ENSMODG00000021534	SYMPK	96	90.187	Monodelphis_domestica
ENSPTRG00000011169	SYMPK	94	73.124	ENSMALG00000008347	sympk	96	69.926	Monopterus_albus
ENSPTRG00000011169	SYMPK	100	98.400	MGP_CAROLIEiJ_G0029267	Sympk	100	93.375	Mus_caroli
ENSPTRG00000011169	SYMPK	100	98.400	ENSMUSG00000023118	Sympk	100	92.564	Mus_musculus
ENSPTRG00000011169	SYMPK	100	99.200	MGP_PahariEiJ_G0021127	Sympk	100	94.136	Mus_pahari
ENSPTRG00000011169	SYMPK	100	98.400	MGP_SPRETEiJ_G0030351	-	100	93.380	Mus_spretus
ENSPTRG00000011169	SYMPK	100	95.376	ENSMPUG00000005505	SYMPK	100	95.376	Mustela_putorius_furo
ENSPTRG00000011169	SYMPK	94	93.499	ENSMLUG00000001359	SYMPK	100	92.147	Myotis_lucifugus
ENSPTRG00000011169	SYMPK	100	98.400	ENSNGAG00000000820	Sympk	100	94.992	Nannospalax_galili
ENSPTRG00000011169	SYMPK	94	73.836	ENSNBRG00000018101	sympk	92	75.187	Neolamprologus_brichardi
ENSPTRG00000011169	SYMPK	100	100.000	ENSNLEG00000002369	SYMPK	100	86.083	Nomascus_leucogenys
ENSPTRG00000011169	SYMPK	80	92.982	ENSMEUG00000003866	SYMPK	81	92.982	Notamacropus_eugenii
ENSPTRG00000011169	SYMPK	100	94.366	ENSOPRG00000009967	SYMPK	100	94.366	Ochotona_princeps
ENSPTRG00000011169	SYMPK	99	99.200	ENSODEG00000007519	SYMPK	100	96.471	Octodon_degus
ENSPTRG00000011169	SYMPK	94	72.888	ENSONIG00000016802	sympk	96	74.234	Oreochromis_niloticus
ENSPTRG00000011169	SYMPK	94	97.790	ENSOCUG00000005511	SYMPK	93	97.273	Oryctolagus_cuniculus
ENSPTRG00000011169	SYMPK	94	74.588	ENSORLG00000015338	sympk	96	74.473	Oryzias_latipes
ENSPTRG00000011169	SYMPK	94	74.555	ENSORLG00020004402	sympk	91	75.091	Oryzias_latipes_hni
ENSPTRG00000011169	SYMPK	94	74.555	ENSORLG00015005712	sympk	91	75.181	Oryzias_latipes_hsok
ENSPTRG00000011169	SYMPK	94	73.973	ENSOMEG00000022561	sympk	90	75.276	Oryzias_melastigma
ENSPTRG00000011169	SYMPK	100	97.567	ENSOGAG00000013483	SYMPK	100	97.567	Otolemur_garnettii
ENSPTRG00000011169	SYMPK	100	91.420	ENSOARG00000010349	SYMPK	100	91.264	Ovis_aries
ENSPTRG00000011169	SYMPK	100	100.000	ENSPPAG00000043204	SYMPK	100	100.000	Pan_paniscus
ENSPTRG00000011169	SYMPK	100	97.410	ENSPPRG00000004282	SYMPK	100	97.410	Panthera_pardus
ENSPTRG00000011169	SYMPK	100	94.976	ENSPTIG00000015420	SYMPK	100	94.976	Panthera_tigris_altaica
ENSPTRG00000011169	SYMPK	100	99.294	ENSPANG00000019930	SYMPK	100	100.000	Papio_anubis
ENSPTRG00000011169	SYMPK	94	74.049	ENSPKIG00000017132	sympk	96	72.987	Paramormyrops_kingsleyae
ENSPTRG00000011169	SYMPK	100	94.072	ENSPEMG00000007564	Sympk	100	93.682	Peromyscus_maniculatus_bairdii
ENSPTRG00000011169	SYMPK	94	63.102	ENSPMAG00000004936	sympk	100	65.679	Petromyzon_marinus
ENSPTRG00000011169	SYMPK	98	88.775	ENSPCIG00000024476	SYMPK	99	88.337	Phascolarctos_cinereus
ENSPTRG00000011169	SYMPK	94	74.725	ENSPFOG00000001194	sympk	90	75.272	Poecilia_formosa
ENSPTRG00000011169	SYMPK	94	74.725	ENSPLAG00000012995	sympk	90	75.181	Poecilia_latipinna
ENSPTRG00000011169	SYMPK	94	74.588	ENSPMEG00000008099	sympk	90	75.181	Poecilia_mexicana
ENSPTRG00000011169	SYMPK	94	74.863	ENSPREG00000006176	sympk	90	75.431	Poecilia_reticulata
ENSPTRG00000011169	SYMPK	94	99.862	ENSPPYG00000010135	SYMPK	99	99.281	Pongo_abelii
ENSPTRG00000011169	SYMPK	100	96.970	ENSPCAG00000005182	SYMPK	94	90.738	Procavia_capensis
ENSPTRG00000011169	SYMPK	100	97.882	ENSPCOG00000023740	SYMPK	100	98.400	Propithecus_coquereli
ENSPTRG00000011169	SYMPK	97	96.045	ENSPVAG00000001355	SYMPK	100	96.045	Pteropus_vampyrus
ENSPTRG00000011169	SYMPK	94	73.562	ENSPNYG00000011455	sympk	90	74.686	Pundamilia_nyererei
ENSPTRG00000011169	SYMPK	94	74.419	ENSPNAG00000016505	sympk	89	75.560	Pygocentrus_nattereri
ENSPTRG00000011169	SYMPK	100	93.998	ENSRNOG00000014353	Sympk	100	93.765	Rattus_norvegicus
ENSPTRG00000011169	SYMPK	100	100.000	ENSRBIG00000040963	SYMPK	100	100.000	Rhinopithecus_bieti
ENSPTRG00000011169	SYMPK	100	99.294	ENSRROG00000024834	SYMPK	100	99.294	Rhinopithecus_roxellana
ENSPTRG00000011169	SYMPK	100	98.666	ENSSBOG00000034497	SYMPK	100	99.200	Saimiri_boliviensis_boliviensis
ENSPTRG00000011169	SYMPK	94	90.784	ENSSHAG00000003139	SYMPK	99	91.154	Sarcophilus_harrisii
ENSPTRG00000011169	SYMPK	94	74.049	ENSSFOG00015006974	sympk	90	76.004	Scleropages_formosus
ENSPTRG00000011169	SYMPK	94	73.288	ENSSMAG00000018130	sympk	72	74.615	Scophthalmus_maximus
ENSPTRG00000011169	SYMPK	94	73.525	ENSSDUG00000007092	sympk	91	74.619	Seriola_dumerili
ENSPTRG00000011169	SYMPK	94	73.525	ENSSLDG00000014774	sympk	96	72.374	Seriola_lalandi_dorsalis
ENSPTRG00000011169	SYMPK	72	92.735	ENSSARG00000004274	-	66	100.000	Sorex_araneus
ENSPTRG00000011169	SYMPK	94	86.226	ENSSPUG00000002789	SYMPK	96	82.688	Sphenodon_punctatus
ENSPTRG00000011169	SYMPK	94	73.525	ENSSPAG00000000854	sympk	90	74.729	Stegastes_partitus
ENSPTRG00000011169	SYMPK	100	97.253	ENSSSCG00000003093	SYMPK	100	97.253	Sus_scrofa
ENSPTRG00000011169	SYMPK	94	73.114	ENSTRUG00000010202	sympk	91	74.214	Takifugu_rubripes
ENSPTRG00000011169	SYMPK	94	73.425	ENSTNIG00000017855	sympk	99	73.590	Tetraodon_nigroviridis
ENSPTRG00000011169	SYMPK	88	94.805	ENSTBEG00000000454	SYMPK	88	94.805	Tupaia_belangeri
ENSPTRG00000011169	SYMPK	100	88.784	ENSTTRG00000014311	SYMPK	100	88.784	Tursiops_truncatus
ENSPTRG00000011169	SYMPK	100	98.400	ENSUAMG00000022272	SYMPK	100	94.353	Ursus_americanus
ENSPTRG00000011169	SYMPK	100	98.400	ENSUMAG00000023698	SYMPK	100	97.174	Ursus_maritimus
ENSPTRG00000011169	SYMPK	94	98.893	ENSVVUG00000003024	SYMPK	99	97.627	Vulpes_vulpes
ENSPTRG00000011169	SYMPK	94	73.699	ENSXETG00000024453	sympk	94	72.743	Xenopus_tropicalis
ENSPTRG00000011169	SYMPK	93	72.877	ENSXCOG00000015368	sympk	100	74.468	Xiphophorus_couchianus
ENSPTRG00000011169	SYMPK	94	74.588	ENSXMAG00000005737	sympk	90	75.272	Xiphophorus_maculatus