EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000011215 (Gene tree)
Gene ID: -
Gene Symbol: NOP53
Alias: -
Full Name: NOP53 ribosome biogenesis factor
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 11730 bases
Position: chr19:49884977-49896706
Accession: 6629
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000019247	Nop53	PF07767.11	2.2e-104	1	1
ENSPTRP00000087836	Nop53	PF07767.11	2e-90	1	2
ENSPTRP00000087836	Nop53	PF07767.11	2e-90	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000020842	-	1541	XM_016936351	ENSPTRP00000019247	478 (aa)	XP_016791840	H2QGQ0
ENSPTRT00000087095	-	1410	-	ENSPTRP00000087836	469 (aa)	-	A0A2I3RVX9

Gene Model

Click here to download ENSPTRG00000011215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000011215's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000011215	NOP53	99	83.473	ENSPTRG00000052493	-	100	83.264
ENSPTRG00000011215	NOP53	100	100.000	ENSPTRG00000043520	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000011215	NOP53	100	98.954	ENSG00000105373	NOP53	100	98.954	Homo_sapiens
ENSPTRG00000011215	NOP53	87	48.000	ENSAPOG00000006446	nop53	97	46.220	Acanthochromis_polyacanthus
ENSPTRG00000011215	NOP53	99	80.684	ENSAMEG00000015214	NOP53	100	80.325	Ailuropoda_melanoleuca
ENSPTRG00000011215	NOP53	73	45.225	ENSACIG00000002467	nop53	98	46.348	Amphilophus_citrinellus
ENSPTRG00000011215	NOP53	87	47.406	ENSAOCG00000007002	nop53	97	45.633	Amphiprion_ocellaris
ENSPTRG00000011215	NOP53	87	48.000	ENSAPEG00000024564	nop53	97	46.220	Amphiprion_percula
ENSPTRG00000011215	NOP53	92	46.980	ENSATEG00000021860	nop53	97	46.476	Anabas_testudineus
ENSPTRG00000011215	NOP53	60	58.305	ENSACAG00000011362	-	100	58.983	Anolis_carolinensis
ENSPTRG00000011215	NOP53	96	86.710	ENSANAG00000007933	NOP53	100	86.710	Aotus_nancymaae
ENSPTRG00000011215	NOP53	87	47.518	ENSACLG00000011832	nop53	97	46.652	Astatotilapia_calliptera
ENSPTRG00000011215	NOP53	88	49.409	ENSAMXG00000014883	nop53	89	48.815	Astyanax_mexicanus
ENSPTRG00000011215	NOP53	100	84.917	ENSBTAG00000021192	NOP53	91	84.711	Bos_taurus
ENSPTRG00000011215	NOP53	100	92.531	ENSCJAG00000011385	NOP53	100	92.946	Callithrix_jacchus
ENSPTRG00000011215	NOP53	97	85.169	ENSCAFG00000004080	NOP53	100	84.265	Canis_familiaris
ENSPTRG00000011215	NOP53	99	86.013	ENSCHIG00000009393	NOP53	100	85.804	Capra_hircus
ENSPTRG00000011215	NOP53	97	78.664	ENSTSYG00000036631	NOP53	99	77.895	Carlito_syrichta
ENSPTRG00000011215	NOP53	83	83.333	ENSCAPG00000013148	NOP53	100	82.828	Cavia_aperea
ENSPTRG00000011215	NOP53	99	83.473	ENSCPOG00000015665	NOP53	100	83.054	Cavia_porcellus
ENSPTRG00000011215	NOP53	100	94.351	ENSCCAG00000025477	NOP53	100	94.351	Cebus_capucinus
ENSPTRG00000011215	NOP53	100	97.280	ENSCATG00000032842	NOP53	100	97.280	Cercocebus_atys
ENSPTRG00000011215	NOP53	100	81.743	ENSCLAG00000001860	NOP53	100	81.743	Chinchilla_lanigera
ENSPTRG00000011215	NOP53	100	97.490	ENSCSAG00000002928	NOP53	100	97.490	Chlorocebus_sabaeus
ENSPTRG00000011215	NOP53	84	60.732	ENSCPBG00000009047	NOP53	95	60.584	Chrysemys_picta_bellii
ENSPTRG00000011215	NOP53	88	33.333	ENSCING00000021395	-	96	33.565	Ciona_intestinalis
ENSPTRG00000011215	NOP53	88	36.279	ENSCSAVG00000006009	-	95	35.349	Ciona_savignyi
ENSPTRG00000011215	NOP53	100	89.331	ENSCANG00000039648	NOP53	100	89.331	Colobus_angolensis_palliatus
ENSPTRG00000011215	NOP53	100	80.290	ENSCGRG00001019033	Nop53	100	80.290	Cricetulus_griseus_chok1gshd
ENSPTRG00000011215	NOP53	87	43.981	ENSCSEG00000014834	nop53	89	43.908	Cynoglossus_semilaevis
ENSPTRG00000011215	NOP53	87	49.533	ENSCVAG00000005940	nop53	97	48.401	Cyprinodon_variegatus
ENSPTRG00000011215	NOP53	88	52.358	ENSDARG00000100452	nop53	100	55.080	Danio_rerio
ENSPTRG00000011215	NOP53	97	86.422	ENSDNOG00000005165	NOP53	91	86.402	Dasypus_novemcinctus
ENSPTRG00000011215	NOP53	61	83.793	ENSDORG00000016339	-	100	83.793	Dipodomys_ordii
ENSPTRG00000011215	NOP53	97	42.521	ENSEBUG00000012747	nop53	91	43.119	Eptatretus_burgeri
ENSPTRG00000011215	NOP53	100	84.167	ENSEASG00005004345	NOP53	96	85.417	Equus_asinus_asinus
ENSPTRG00000011215	NOP53	100	84.536	ENSECAG00000026850	NOP53	96	85.155	Equus_caballus
ENSPTRG00000011215	NOP53	100	74.167	ENSEEUG00000005287	NOP53	87	98.485	Erinaceus_europaeus
ENSPTRG00000011215	NOP53	87	50.236	ENSELUG00000001525	nop53	89	49.650	Esox_lucius
ENSPTRG00000011215	NOP53	100	85.773	ENSFCAG00000010861	NOP53	100	84.742	Felis_catus
ENSPTRG00000011215	NOP53	99	70.711	ENSFDAG00000010478	NOP53	100	68.894	Fukomys_damarensis
ENSPTRG00000011215	NOP53	87	49.882	ENSFHEG00000017763	nop53	94	47.246	Fundulus_heteroclitus
ENSPTRG00000011215	NOP53	87	45.694	ENSGMOG00000014299	nop53	88	44.976	Gadus_morhua
ENSPTRG00000011215	NOP53	96	53.895	ENSGALG00000039473	NOP53	77	53.684	Gallus_gallus
ENSPTRG00000011215	NOP53	87	47.775	ENSGAFG00000013301	nop53	95	45.975	Gambusia_affinis
ENSPTRG00000011215	NOP53	87	48.235	ENSGACG00000005766	nop53	88	47.765	Gasterosteus_aculeatus
ENSPTRG00000011215	NOP53	99	95.597	ENSGGOG00000005462	NOP53	100	95.597	Gorilla_gorilla
ENSPTRG00000011215	NOP53	97	83.547	ENSGGOG00000024728	-	100	85.565	Gorilla_gorilla
ENSPTRG00000011215	NOP53	87	47.518	ENSHBUG00000023625	nop53	97	46.652	Haplochromis_burtoni
ENSPTRG00000011215	NOP53	99	80.208	ENSHGLG00000018240	NOP53	100	79.583	Heterocephalus_glaber_female
ENSPTRG00000011215	NOP53	81	87.302	ENSHGLG00100015613	NOP53	100	87.402	Heterocephalus_glaber_male
ENSPTRG00000011215	NOP53	87	45.995	ENSHCOG00000017133	nop53	89	45.872	Hippocampus_comes
ENSPTRG00000011215	NOP53	88	52.029	ENSIPUG00000008154	nop53	78	51.790	Ictalurus_punctatus
ENSPTRG00000011215	NOP53	100	84.519	ENSSTOG00000022092	NOP53	100	84.100	Ictidomys_tridecemlineatus
ENSPTRG00000011215	NOP53	98	82.128	ENSJJAG00000007854	Nop53	100	81.875	Jaculus_jaculus
ENSPTRG00000011215	NOP53	84	47.304	ENSKMAG00000020756	nop53	97	45.638	Kryptolebias_marmoratus
ENSPTRG00000011215	NOP53	87	47.344	ENSLBEG00000011432	nop53	89	47.344	Labrus_bergylta
ENSPTRG00000011215	NOP53	85	50.369	ENSLACG00000018320	NOP53	100	50.868	Latimeria_chalumnae
ENSPTRG00000011215	NOP53	87	50.358	ENSLOCG00000014178	nop53	88	51.790	Lepisosteus_oculatus
ENSPTRG00000011215	NOP53	100	97.280	ENSMFAG00000045103	NOP53	100	97.280	Macaca_fascicularis
ENSPTRG00000011215	NOP53	100	97.280	ENSMMUG00000013348	NOP53	97	100.000	Macaca_mulatta
ENSPTRG00000011215	NOP53	100	97.490	ENSMNEG00000042540	NOP53	96	97.490	Macaca_nemestrina
ENSPTRG00000011215	NOP53	100	84.728	ENSMLEG00000032475	NOP53	100	84.407	Mandrillus_leucophaeus
ENSPTRG00000011215	NOP53	87	49.302	ENSMAMG00000012652	nop53	97	48.298	Mastacembelus_armatus
ENSPTRG00000011215	NOP53	87	45.238	ENSMZEG00005005033	nop53	96	44.348	Maylandia_zebra
ENSPTRG00000011215	NOP53	100	81.042	ENSMAUG00000012617	Nop53	100	81.042	Mesocricetus_auratus
ENSPTRG00000011215	NOP53	91	89.041	ENSMICG00000005580	NOP53	95	88.249	Microcebus_murinus
ENSPTRG00000011215	NOP53	99	82.809	ENSMOCG00000008367	Nop53	100	82.600	Microtus_ochrogaster
ENSPTRG00000011215	NOP53	87	47.255	ENSMMOG00000006515	nop53	96	45.077	Mola_mola
ENSPTRG00000011215	NOP53	99	69.492	ENSMODG00000008721	NOP53	92	68.856	Monodelphis_domestica
ENSPTRG00000011215	NOP53	95	46.421	ENSMALG00000020350	nop53	92	47.289	Monopterus_albus
ENSPTRG00000011215	NOP53	100	82.025	MGP_CAROLIEiJ_G0029218	Nop53	100	81.612	Mus_caroli
ENSPTRG00000011215	NOP53	100	82.231	ENSMUSG00000041560	Nop53	100	81.818	Mus_musculus
ENSPTRG00000011215	NOP53	85	80.340	MGP_PahariEiJ_G0021074	-	100	79.255	Mus_pahari
ENSPTRG00000011215	NOP53	100	81.405	MGP_SPRETEiJ_G0030298	Nop53	100	80.992	Mus_spretus
ENSPTRG00000011215	NOP53	100	86.008	ENSMPUG00000004456	NOP53	100	84.156	Mustela_putorius_furo
ENSPTRG00000011215	NOP53	54	92.913	ENSMLUG00000027066	-	100	82.156	Myotis_lucifugus
ENSPTRG00000011215	NOP53	100	81.159	ENSNGAG00000019894	Nop53	100	81.159	Nannospalax_galili
ENSPTRG00000011215	NOP53	87	41.766	ENSNBRG00000002057	nop53	93	40.741	Neolamprologus_brichardi
ENSPTRG00000011215	NOP53	97	72.294	ENSNLEG00000028326	-	100	72.294	Nomascus_leucogenys
ENSPTRG00000011215	NOP53	100	97.908	ENSNLEG00000003143	NOP53	100	97.908	Nomascus_leucogenys
ENSPTRG00000011215	NOP53	76	60.109	ENSMEUG00000002525	-	96	60.623	Notamacropus_eugenii
ENSPTRG00000011215	NOP53	99	81.289	ENSODEG00000006707	NOP53	100	80.873	Octodon_degus
ENSPTRG00000011215	NOP53	87	47.991	ENSONIG00000016624	nop53	97	46.652	Oreochromis_niloticus
ENSPTRG00000011215	NOP53	87	47.608	ENSORLG00000008659	nop53	96	46.304	Oryzias_latipes
ENSPTRG00000011215	NOP53	87	44.498	ENSORLG00020019916	nop53	93	43.913	Oryzias_latipes_hni
ENSPTRG00000011215	NOP53	87	47.630	ENSORLG00015001315	nop53	97	47.403	Oryzias_latipes_hsok
ENSPTRG00000011215	NOP53	95	48.164	ENSOMEG00000018244	nop53	97	47.198	Oryzias_melastigma
ENSPTRG00000011215	NOP53	100	95.588	ENSOGAG00000024300	NOP53	89	95.588	Otolemur_garnettii
ENSPTRG00000011215	NOP53	99	64.870	ENSOARG00000011414	NOP53	100	65.182	Ovis_aries
ENSPTRG00000011215	NOP53	99	83.473	ENSPPAG00000029337	-	100	83.264	Pan_paniscus
ENSPTRG00000011215	NOP53	100	97.908	ENSPPAG00000002927	-	100	97.908	Pan_paniscus
ENSPTRG00000011215	NOP53	100	87.846	ENSPPAG00000032995	-	100	86.141	Pan_paniscus
ENSPTRG00000011215	NOP53	100	84.948	ENSPPRG00000008954	NOP53	100	83.918	Panthera_pardus
ENSPTRG00000011215	NOP53	100	96.653	ENSPANG00000002964	NOP53	100	96.653	Papio_anubis
ENSPTRG00000011215	NOP53	87	51.074	ENSPKIG00000000127	nop53	88	50.827	Paramormyrops_kingsleyae
ENSPTRG00000011215	NOP53	87	48.009	ENSPMGG00000021579	nop53	88	47.877	Periophthalmus_magnuspinnatus
ENSPTRG00000011215	NOP53	100	83.195	ENSPEMG00000006856	Nop53	100	83.195	Peromyscus_maniculatus_bairdii
ENSPTRG00000011215	NOP53	99	66.320	ENSPCIG00000016718	NOP53	100	67.152	Phascolarctos_cinereus
ENSPTRG00000011215	NOP53	87	49.415	ENSPFOG00000002839	nop53	89	49.415	Poecilia_formosa
ENSPTRG00000011215	NOP53	87	49.415	ENSPLAG00000006675	nop53	89	49.415	Poecilia_latipinna
ENSPTRG00000011215	NOP53	87	48.946	ENSPMEG00000009589	nop53	89	48.946	Poecilia_mexicana
ENSPTRG00000011215	NOP53	87	45.863	ENSPREG00000008711	nop53	88	45.735	Poecilia_reticulata
ENSPTRG00000011215	NOP53	100	90.586	ENSPPYG00000010181	NOP53	100	90.586	Pongo_abelii
ENSPTRG00000011215	NOP53	98	81.277	ENSPCAG00000007692	NOP53	100	81.277	Procavia_capensis
ENSPTRG00000011215	NOP53	81	95.690	ENSPCOG00000016124	NOP53	100	94.488	Propithecus_coquereli
ENSPTRG00000011215	NOP53	83	82.955	ENSPVAG00000014671	NOP53	84	80.303	Pteropus_vampyrus
ENSPTRG00000011215	NOP53	87	47.518	ENSPNYG00000001341	nop53	97	46.652	Pundamilia_nyererei
ENSPTRG00000011215	NOP53	88	51.054	ENSPNAG00000012520	nop53	89	51.054	Pygocentrus_nattereri
ENSPTRG00000011215	NOP53	100	81.743	ENSRNOG00000013023	Nop53	100	81.743	Rattus_norvegicus
ENSPTRG00000011215	NOP53	100	96.653	ENSRBIG00000036427	NOP53	100	96.653	Rhinopithecus_bieti
ENSPTRG00000011215	NOP53	100	96.862	ENSRROG00000042298	NOP53	100	96.862	Rhinopithecus_roxellana
ENSPTRG00000011215	NOP53	97	95.671	ENSSBOG00000033115	NOP53	100	94.792	Saimiri_boliviensis_boliviensis
ENSPTRG00000011215	NOP53	84	69.059	ENSSHAG00000002239	NOP53	100	68.305	Sarcophilus_harrisii
ENSPTRG00000011215	NOP53	87	52.029	ENSSFOG00015007062	gltscr2	96	49.891	Scleropages_formosus
ENSPTRG00000011215	NOP53	87	47.031	ENSSMAG00000000212	nop53	89	46.793	Scophthalmus_maximus
ENSPTRG00000011215	NOP53	87	47.630	ENSSDUG00000010575	nop53	97	46.253	Seriola_dumerili
ENSPTRG00000011215	NOP53	87	47.393	ENSSLDG00000000140	nop53	94	46.320	Seriola_lalandi_dorsalis
ENSPTRG00000011215	NOP53	83	80.769	ENSSARG00000014109	NOP53	83	80.769	Sorex_araneus
ENSPTRG00000011215	NOP53	97	49.247	ENSSPUG00000004420	NOP53	98	49.247	Sphenodon_punctatus
ENSPTRG00000011215	NOP53	87	47.183	ENSSPAG00000000318	nop53	97	45.474	Stegastes_partitus
ENSPTRG00000011215	NOP53	97	85.043	ENSSSCG00000022774	NOP53	100	84.134	Sus_scrofa
ENSPTRG00000011215	NOP53	87	47.294	ENSTRUG00000004944	nop53	89	47.564	Takifugu_rubripes
ENSPTRG00000011215	NOP53	81	91.270	ENSTBEG00000008708	NOP53	80	91.339	Tupaia_belangeri
ENSPTRG00000011215	NOP53	100	83.711	ENSTTRG00000011831	NOP53	100	82.474	Tursiops_truncatus
ENSPTRG00000011215	NOP53	97	82.875	ENSUAMG00000028254	NOP53	100	81.612	Ursus_americanus
ENSPTRG00000011215	NOP53	77	83.820	ENSVVUG00000023365	NOP53	77	82.857	Vulpes_vulpes
ENSPTRG00000011215	NOP53	96	67.257	ENSXETG00000002782	nop53	99	50.535	Xenopus_tropicalis
ENSPTRG00000011215	NOP53	87	49.409	ENSXCOG00000004436	nop53	97	46.444	Xiphophorus_couchianus
ENSPTRG00000011215	NOP53	87	49.415	ENSXMAG00000002589	nop53	89	48.387	Xiphophorus_maculatus