EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000011277 (Gene tree)
Gene ID: 747202
Gene Symbol: SNRNP70
Alias: -
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 26331 bases
Position: chr19:51304837-51331167
Accession: 8612
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000067679	RRM_1	PF00076.22	3.6e-18	1	1
ENSPTRP00000048558	RRM_1	PF00076.22	9.9e-18	1	1
ENSPTRP00000086419	RRM_1	PF00076.22	2.2e-13	1	1
ENSPTRP00000062390	RRM_1	PF00076.22	1.5e-11	1	1
ENSPTRP00000086419	U1snRNP70_N	PF12220.8	1.3e-28	1	1
ENSPTRP00000067679	U1snRNP70_N	PF12220.8	6.2e-28	1	1
ENSPTRP00000062390	U1snRNP70_N	PF12220.8	1.2e-27	1	1
ENSPTRP00000048558	U1snRNP70_N	PF12220.8	1.8e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000088793	-	1041	-	ENSPTRP00000062390	346 (aa)	-	A0A2I3RCM6
ENSPTRT00000084919	-	756	-	ENSPTRP00000067679	251 (aa)	-	A0A2I3RSR2
ENSPTRT00000100977	-	501	-	ENSPTRP00000086419	166 (aa)	-	A0A2J8K2G3
ENSPTRT00000055948	-	1976	XM_001156213	ENSPTRP00000048558	437 (aa)	XP_001156213	H2R5X1

Gene Model

Click here to download ENSPTRG00000011277's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000011277's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000011277	SNRNP70	100	100.000	ENSG00000104852	SNRNP70	100	100.000	Homo_sapiens
ENSPTRG00000011277	SNRNP70	86	88.028	ENSAPOG00000009322	snrnp70	89	88.028	Acanthochromis_polyacanthus
ENSPTRG00000011277	SNRNP70	99	97.561	ENSAMEG00000014468	SNRNP70	100	92.744	Ailuropoda_melanoleuca
ENSPTRG00000011277	SNRNP70	99	87.805	ENSACIG00000017909	snrnp70	52	86.420	Amphilophus_citrinellus
ENSPTRG00000011277	SNRNP70	99	89.634	ENSAOCG00000011672	snrnp70	50	83.482	Amphiprion_ocellaris
ENSPTRG00000011277	SNRNP70	99	89.634	ENSAPEG00000006219	snrnp70	55	69.636	Amphiprion_percula
ENSPTRG00000011277	SNRNP70	99	93.902	ENSACAG00000013276	SNRNP70	51	97.297	Anolis_carolinensis
ENSPTRG00000011277	SNRNP70	100	100.000	ENSANAG00000036787	SNRNP70	100	100.000	Aotus_nancymaae
ENSPTRG00000011277	SNRNP70	100	100.000	ENSBTAG00000048800	-	100	100.000	Bos_taurus
ENSPTRG00000011277	SNRNP70	99	50.303	WBGene00004390	rnp-7	56	53.723	Caenorhabditis_elegans
ENSPTRG00000011277	SNRNP70	100	100.000	ENSCJAG00000000193	SNRNP70	100	100.000	Callithrix_jacchus
ENSPTRG00000011277	SNRNP70	100	100.000	ENSCAFG00000003711	SNRNP70	100	100.000	Canis_familiaris
ENSPTRG00000011277	SNRNP70	100	96.838	ENSCAFG00020025470	SNRNP70	100	96.388	Canis_lupus_dingo
ENSPTRG00000011277	SNRNP70	100	100.000	ENSCHIG00000018534	-	100	100.000	Capra_hircus
ENSPTRG00000011277	SNRNP70	63	88.571	ENSTSYG00000032350	-	85	88.571	Carlito_syrichta
ENSPTRG00000011277	SNRNP70	100	99.602	ENSCPOG00000019589	SNRNP70	100	97.059	Cavia_porcellus
ENSPTRG00000011277	SNRNP70	89	99.486	ENSCCAG00000036551	SNRNP70	100	99.486	Cebus_capucinus
ENSPTRG00000011277	SNRNP70	100	100.000	ENSCATG00000016149	SNRNP70	100	100.000	Cercocebus_atys
ENSPTRG00000011277	SNRNP70	100	99.602	ENSCLAG00000007991	SNRNP70	100	98.178	Chinchilla_lanigera
ENSPTRG00000011277	SNRNP70	100	98.974	ENSCSAG00000002759	SNRNP70	100	97.941	Chlorocebus_sabaeus
ENSPTRG00000011277	SNRNP70	99	96.341	ENSCPBG00000014841	SNRNP70	51	99.099	Chrysemys_picta_bellii
ENSPTRG00000011277	SNRNP70	96	66.875	ENSCSAVG00000010109	-	50	70.681	Ciona_savignyi
ENSPTRG00000011277	SNRNP70	100	99.772	ENSCANG00000036607	SNRNP70	100	99.772	Colobus_angolensis_palliatus
ENSPTRG00000011277	SNRNP70	100	99.602	ENSCGRG00001020676	Snrnp70	100	95.973	Cricetulus_griseus_chok1gshd
ENSPTRG00000011277	SNRNP70	100	99.602	ENSCGRG00000018048	Snrnp70	100	95.973	Cricetulus_griseus_crigri
ENSPTRG00000011277	SNRNP70	99	88.415	ENSCSEG00000011978	snrnp70	99	91.480	Cynoglossus_semilaevis
ENSPTRG00000011277	SNRNP70	96	89.937	ENSCVAG00000003912	snrnp70	99	89.937	Cyprinodon_variegatus
ENSPTRG00000011277	SNRNP70	99	86.585	ENSDARG00000077126	snrnp70	99	88.820	Danio_rerio
ENSPTRG00000011277	SNRNP70	100	100.000	ENSDNOG00000035849	-	100	100.000	Dasypus_novemcinctus
ENSPTRG00000011277	SNRNP70	100	99.602	ENSDORG00000010228	Snrnp70	100	95.946	Dipodomys_ordii
ENSPTRG00000011277	SNRNP70	99	60.366	FBgn0016978	snRNP-U1-70K	59	60.377	Drosophila_melanogaster
ENSPTRG00000011277	SNRNP70	74	100.000	ENSETEG00000005009	SNRNP70	74	100.000	Echinops_telfairi
ENSPTRG00000011277	SNRNP70	100	99.602	ENSEASG00005004917	SNRNP70	100	97.955	Equus_asinus_asinus
ENSPTRG00000011277	SNRNP70	100	100.000	ENSECAG00000013936	-	100	100.000	Equus_caballus
ENSPTRG00000011277	SNRNP70	100	83.144	ENSEEUG00000005666	SNRNP70	100	82.232	Erinaceus_europaeus
ENSPTRG00000011277	SNRNP70	100	99.602	ENSFCAG00000042603	SNRNP70	100	91.591	Felis_catus
ENSPTRG00000011277	SNRNP70	100	99.602	ENSFDAG00000013830	SNRNP70	96	99.682	Fukomys_damarensis
ENSPTRG00000011277	SNRNP70	99	87.805	ENSGMOG00000011492	snrnp70	97	91.403	Gadus_morhua
ENSPTRG00000011277	SNRNP70	99	88.415	ENSGACG00000000448	snrnp70	70	91.928	Gasterosteus_aculeatus
ENSPTRG00000011277	SNRNP70	96	80.000	ENSGAGG00000012628	SNRNP70	99	80.000	Gopherus_agassizii
ENSPTRG00000011277	SNRNP70	100	100.000	ENSGGOG00000008245	SNRNP70	100	100.000	Gorilla_gorilla
ENSPTRG00000011277	SNRNP70	100	100.000	ENSHGLG00100001651	-	100	100.000	Heterocephalus_glaber_male
ENSPTRG00000011277	SNRNP70	100	100.000	ENSSTOG00000013988	-	100	100.000	Ictidomys_tridecemlineatus
ENSPTRG00000011277	SNRNP70	100	99.602	ENSJJAG00000002614	Snrnp70	100	95.291	Jaculus_jaculus
ENSPTRG00000011277	SNRNP70	99	97.561	ENSLAFG00000028536	SNRNP70	100	100.000	Loxodonta_africana
ENSPTRG00000011277	SNRNP70	100	100.000	ENSMFAG00000039824	SNRNP70	100	100.000	Macaca_fascicularis
ENSPTRG00000011277	SNRNP70	100	100.000	ENSMMUG00000004928	SNRNP70	100	100.000	Macaca_mulatta
ENSPTRG00000011277	SNRNP70	100	100.000	ENSMNEG00000038057	SNRNP70	100	100.000	Macaca_nemestrina
ENSPTRG00000011277	SNRNP70	100	100.000	ENSMLEG00000030967	SNRNP70	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000011277	SNRNP70	100	99.602	ENSMAUG00000020970	Snrnp70	100	96.188	Mesocricetus_auratus
ENSPTRG00000011277	SNRNP70	100	100.000	ENSMICG00000038437	SNRNP70	100	100.000	Microcebus_murinus
ENSPTRG00000011277	SNRNP70	100	99.602	ENSMOCG00000012825	Snrnp70	100	95.323	Microtus_ochrogaster
ENSPTRG00000011277	SNRNP70	75	76.716	ENSMODG00000023381	SNRNP70	100	80.000	Monodelphis_domestica
ENSPTRG00000011277	SNRNP70	100	99.602	MGP_CAROLIEiJ_G0029714	Snrnp70	100	100.000	Mus_caroli
ENSPTRG00000011277	SNRNP70	100	99.602	ENSMUSG00000063511	Snrnp70	100	100.000	Mus_musculus
ENSPTRG00000011277	SNRNP70	100	99.602	MGP_PahariEiJ_G0012939	Snrnp70	100	100.000	Mus_pahari
ENSPTRG00000011277	SNRNP70	100	99.602	MGP_SPRETEiJ_G0030812	Snrnp70	100	100.000	Mus_spretus
ENSPTRG00000011277	SNRNP70	100	99.602	ENSMPUG00000003258	SNRNP70	100	98.182	Mustela_putorius_furo
ENSPTRG00000011277	SNRNP70	100	99.602	ENSMLUG00000011766	SNRNP70	100	98.182	Myotis_lucifugus
ENSPTRG00000011277	SNRNP70	100	99.203	ENSNGAG00000021191	Snrnp70	95	97.531	Nannospalax_galili
ENSPTRG00000011277	SNRNP70	99	89.024	ENSNBRG00000003126	snrnp70	96	92.377	Neolamprologus_brichardi
ENSPTRG00000011277	SNRNP70	99	100.000	ENSNLEG00000004899	SNRNP70	100	100.000	Nomascus_leucogenys
ENSPTRG00000011277	SNRNP70	80	84.483	ENSMEUG00000015650	SNRNP70	55	98.438	Notamacropus_eugenii
ENSPTRG00000011277	SNRNP70	100	99.602	ENSODEG00000017499	SNRNP70	100	93.290	Octodon_degus
ENSPTRG00000011277	SNRNP70	99	88.415	ENSONIG00000007822	snrnp70	52	91.928	Oreochromis_niloticus
ENSPTRG00000011277	SNRNP70	99	96.951	ENSOANG00000005213	SNRNP70	97	99.550	Ornithorhynchus_anatinus
ENSPTRG00000011277	SNRNP70	100	99.602	ENSOCUG00000015081	SNRNP70	85	92.268	Oryctolagus_cuniculus
ENSPTRG00000011277	SNRNP70	99	90.244	ENSOMEG00000013002	snrnp70	52	87.654	Oryzias_melastigma
ENSPTRG00000011277	SNRNP70	100	99.206	ENSOGAG00000029310	SNRNP70	100	97.511	Otolemur_garnettii
ENSPTRG00000011277	SNRNP70	99	97.561	ENSOARG00000012608	SNRNP70	93	100.000	Ovis_aries
ENSPTRG00000011277	SNRNP70	100	100.000	ENSPPAG00000035067	SNRNP70	100	100.000	Pan_paniscus
ENSPTRG00000011277	SNRNP70	100	99.602	ENSPPRG00000005579	SNRNP70	100	98.182	Panthera_pardus
ENSPTRG00000011277	SNRNP70	100	100.000	ENSPANG00000004068	SNRNP70	100	100.000	Papio_anubis
ENSPTRG00000011277	SNRNP70	96	80.503	ENSPKIG00000019992	snrnp70	86	79.012	Paramormyrops_kingsleyae
ENSPTRG00000011277	SNRNP70	98	96.296	ENSPSIG00000015251	SNRNP70	90	86.087	Pelodiscus_sinensis
ENSPTRG00000011277	SNRNP70	96	90.566	ENSPMGG00000010153	snrnp70	77	90.062	Periophthalmus_magnuspinnatus
ENSPTRG00000011277	SNRNP70	100	99.602	ENSPEMG00000019011	Snrnp70	100	95.333	Peromyscus_maniculatus_bairdii
ENSPTRG00000011277	SNRNP70	99	79.878	ENSPMAG00000008502	snrnp70	97	83.422	Petromyzon_marinus
ENSPTRG00000011277	SNRNP70	99	97.561	ENSPCIG00000007296	SNRNP70	65	100.000	Phascolarctos_cinereus
ENSPTRG00000011277	SNRNP70	100	99.542	ENSPPYG00000010234	SNRNP70	100	99.542	Pongo_abelii
ENSPTRG00000011277	SNRNP70	100	93.103	ENSPCOG00000023103	SNRNP70	100	90.787	Propithecus_coquereli
ENSPTRG00000011277	SNRNP70	100	94.545	ENSPVAG00000009578	SNRNP70	100	92.727	Pteropus_vampyrus
ENSPTRG00000011277	SNRNP70	99	75.000	ENSPNAG00000017453	snrnp70	52	67.886	Pygocentrus_nattereri
ENSPTRG00000011277	SNRNP70	100	99.771	ENSRBIG00000042387	SNRNP70	100	99.771	Rhinopithecus_bieti
ENSPTRG00000011277	SNRNP70	100	100.000	ENSRROG00000033636	SNRNP70	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000011277	SNRNP70	100	100.000	ENSSBOG00000020026	SNRNP70	100	100.000	Saimiri_boliviensis_boliviensis
ENSPTRG00000011277	SNRNP70	99	97.561	ENSSHAG00000002194	SNRNP70	65	100.000	Sarcophilus_harrisii
ENSPTRG00000011277	SNRNP70	99	89.634	ENSSDUG00000017591	snrnp70	50	87.243	Seriola_dumerili
ENSPTRG00000011277	SNRNP70	100	94.578	ENSSPUG00000016621	SNRNP70	59	92.430	Sphenodon_punctatus
ENSPTRG00000011277	SNRNP70	99	89.634	ENSSPAG00000009563	snrnp70	50	87.654	Stegastes_partitus
ENSPTRG00000011277	SNRNP70	100	100.000	ENSSSCG00000023792	-	100	100.000	Sus_scrofa
ENSPTRG00000011277	SNRNP70	66	90.000	ENSTNIG00000014186	-	99	90.000	Tetraodon_nigroviridis
ENSPTRG00000011277	SNRNP70	100	99.602	ENSTTRG00000017099	SNRNP70	100	97.506	Tursiops_truncatus
ENSPTRG00000011277	SNRNP70	100	99.602	ENSUAMG00000016147	SNRNP70	100	98.182	Ursus_americanus
ENSPTRG00000011277	SNRNP70	100	100.000	ENSUMAG00000001467	SNRNP70	100	100.000	Ursus_maritimus
ENSPTRG00000011277	SNRNP70	79	99.237	ENSVPAG00000005959	-	100	80.995	Vicugna_pacos
ENSPTRG00000011277	SNRNP70	100	100.000	ENSVVUG00000022976	SNRNP70	100	100.000	Vulpes_vulpes
ENSPTRG00000011277	SNRNP70	99	93.293	ENSXETG00000022919	snrnp70	57	95.595	Xenopus_tropicalis