EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTRG00000011523 (Gene tree)
Gene ID
456312
Gene Symbol
U2AF2
Alias
-
Full Name
U2 small nuclear RNA auxiliary factor 2
Gene Type
protein_coding
Species
Pan_troglodytes
Status
putative
Strand
Plus strand
Length
19317 bases
Position
chr19:58095630-58114946
Accession
2208
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTRP00000019813RRM_1PF00076.221.4e-3413
ENSPTRP00000019813RRM_1PF00076.221.4e-3423
ENSPTRP00000019813RRM_1PF00076.221.4e-3433
ENSPTRP00000091126RRM_1PF00076.222e-3413
ENSPTRP00000091126RRM_1PF00076.222e-3423
ENSPTRP00000091126RRM_1PF00076.222e-3433
ENSPTRP00000065897RRM_1PF00076.221.6e-3112
ENSPTRP00000065897RRM_1PF00076.221.6e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTRT00000021471-1329-ENSPTRP00000019813442 (aa)-H2QH76
ENSPTRT00000110861-2011-ENSPTRP00000065897307 (aa)-A0A2I3RNI3
ENSPTRT00000085581-1428XM_016936912ENSPTRP00000091126475 (aa)XP_016792401K6ZG02
Gene Model
Click here to download ENSPTRG00000011523's gene model file
Pathways
Pathway IDPathway NameSource
ptr03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000011523's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTRG00000011523U2AF28337.255ENSPTRG00000043963-5136.000
ENSPTRG00000011523U2AF28337.255ENSPTRG00000020670PUF605136.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTRG00000011523U2AF2100100.000ENSG00000063244U2AF2100100.000Homo_sapiens
ENSPTRG00000011523U2AF210089.783ENSAPOG00000023155u2af2a10089.783Acanthochromis_polyacanthus
ENSPTRG00000011523U2AF29983.007ENSAPOG00000002208-10072.152Acanthochromis_polyacanthus
ENSPTRG00000011523U2AF28897.356ENSAMEG00000003864U2AF210097.356Ailuropoda_melanoleuca
ENSPTRG00000011523U2AF210095.114ENSACIG00000005749u2af2a9492.629Amphilophus_citrinellus
ENSPTRG00000011523U2AF29980.952ENSACIG00000014173-8977.938Amphilophus_citrinellus
ENSPTRG00000011523U2AF29994.771ENSAOCG00000015571u2af2a10089.053Amphiprion_ocellaris
ENSPTRG00000011523U2AF29983.660ENSAOCG00000003595-10072.574Amphiprion_ocellaris
ENSPTRG00000011523U2AF210094.788ENSAPEG00000009376u2af2a9592.629Amphiprion_percula
ENSPTRG00000011523U2AF29983.333ENSAPEG00000020062-8679.167Amphiprion_percula
ENSPTRG00000011523U2AF210094.788ENSATEG00000022332u2af2a10088.866Anabas_testudineus
ENSPTRG00000011523U2AF29983.987ENSATEG00000020577-8880.147Anabas_testudineus
ENSPTRG00000011523U2AF210098.710ENSACAG00000015489U2AF210096.421Anolis_carolinensis
ENSPTRG00000011523U2AF210097.949ENSANAG00000028042U2AF210097.796Aotus_nancymaae
ENSPTRG00000011523U2AF29983.660ENSACLG00000020793-10072.574Astatotilapia_calliptera
ENSPTRG00000011523U2AF210095.114ENSACLG00000022181u2af2a10089.076Astatotilapia_calliptera
ENSPTRG00000011523U2AF210090.190ENSAMXG00000033347u2af2a10084.504Astyanax_mexicanus
ENSPTRG00000011523U2AF29991.531ENSAMXG00000039454u2af2b9984.632Astyanax_mexicanus
ENSPTRG00000011523U2AF210099.674ENSBTAG00000002830U2AF210099.579Bos_taurus
ENSPTRG00000011523U2AF29962.745WBGene00006697uaf-110056.081Caenorhabditis_elegans
ENSPTRG00000011523U2AF2100100.000ENSCJAG00000017128U2AF2100100.000Callithrix_jacchus
ENSPTRG00000011523U2AF2100100.000ENSCAFG00000002551U2AF210099.158Canis_familiaris
ENSPTRG00000011523U2AF210098.714ENSCAFG00020015445U2AF29795.896Canis_lupus_dingo
ENSPTRG00000011523U2AF210079.299ENSCHIG00000023595U2AF28983.010Capra_hircus
ENSPTRG00000011523U2AF2100100.000ENSTSYG00000007432U2AF2100100.000Carlito_syrichta
ENSPTRG00000011523U2AF210098.714ENSCAPG00000008466U2AF210099.782Cavia_aperea
ENSPTRG00000011523U2AF210099.789ENSCPOG00000001582U2AF210099.789Cavia_porcellus
ENSPTRG00000011523U2AF2100100.000ENSCCAG00000023336U2AF2100100.000Cebus_capucinus
ENSPTRG00000011523U2AF2100100.000ENSCATG00000004637U2AF210099.158Cercocebus_atys
ENSPTRG00000011523U2AF2100100.000ENSCLAG00000000596U2AF210099.158Chinchilla_lanigera
ENSPTRG00000011523U2AF2100100.000ENSCSAG00000001722U2AF210099.158Chlorocebus_sabaeus
ENSPTRG00000011523U2AF210099.674ENSCPBG00000004485U2AF210099.674Chrysemys_picta_bellii
ENSPTRG00000011523U2AF29971.336ENSCING00000003455-9163.393Ciona_intestinalis
ENSPTRG00000011523U2AF29971.010ENSCSAVG00000006813-9960.129Ciona_savignyi
ENSPTRG00000011523U2AF29198.843ENSCANG00000031002-9698.843Colobus_angolensis_palliatus
ENSPTRG00000011523U2AF210091.290ENSCANG00000043845-10091.423Colobus_angolensis_palliatus
ENSPTRG00000011523U2AF29993.137ENSCGRG00001007486-9987.342Cricetulus_griseus_chok1gshd
ENSPTRG00000011523U2AF2100100.000ENSCGRG00001003185-10099.789Cricetulus_griseus_chok1gshd
ENSPTRG00000011523U2AF29993.137ENSCGRG00000018587-9987.342Cricetulus_griseus_crigri
ENSPTRG00000011523U2AF27599.130ENSCGRG00000004524-7994.672Cricetulus_griseus_crigri
ENSPTRG00000011523U2AF27588.820ENSCSEG00000018709u2af2a8288.820Cynoglossus_semilaevis
ENSPTRG00000011523U2AF29981.046ENSCSEG00000020504-8878.109Cynoglossus_semilaevis
ENSPTRG00000011523U2AF29983.333ENSCVAG00000023307-10072.785Cyprinodon_variegatus
ENSPTRG00000011523U2AF210094.788ENSCVAG00000001259u2af2a10088.655Cyprinodon_variegatus
ENSPTRG00000011523U2AF210093.506ENSDARG00000012505u2af2a10084.742Danio_rerio
ENSPTRG00000011523U2AF210091.234ENSDARG00000011740u2af2b10085.093Danio_rerio
ENSPTRG00000011523U2AF29198.843ENSDNOG00000047039U2AF29698.843Dasypus_novemcinctus
ENSPTRG00000011523U2AF2100100.000ENSDORG00000003250U2af2100100.000Dipodomys_ordii
ENSPTRG00000011523U2AF29854.321FBgn0034834LS28553.616Drosophila_melanogaster
ENSPTRG00000011523U2AF29973.548FBgn0005411U2af5010072.340Drosophila_melanogaster
ENSPTRG00000011523U2AF29978.176ENSEBUG00000010917U2AF28975.795Eptatretus_burgeri
ENSPTRG00000011523U2AF29962.866ENSEBUG00000001732U2AF29061.951Eptatretus_burgeri
ENSPTRG00000011523U2AF210098.714ENSEASG00005020708U2AF29097.168Equus_asinus_asinus
ENSPTRG00000011523U2AF2100100.000ENSECAG00000010110U2AF210096.000Equus_caballus
ENSPTRG00000011523U2AF210092.038ENSELUG00000015850u2af2a10087.397Esox_lucius
ENSPTRG00000011523U2AF29982.353ENSELUG00000018459-10070.886Esox_lucius
ENSPTRG00000011523U2AF210091.234ENSELUG00000022291u2af2b10082.600Esox_lucius
ENSPTRG00000011523U2AF2100100.000ENSFCAG00000011504U2AF2100100.000Felis_catus
ENSPTRG00000011523U2AF210098.714ENSFDAG00000011264U2AF29998.081Fukomys_damarensis
ENSPTRG00000011523U2AF210094.788ENSFHEG00000016025u2af2a10088.050Fundulus_heteroclitus
ENSPTRG00000011523U2AF210093.831ENSGMOG00000004535u2af2a10087.083Gadus_morhua
ENSPTRG00000011523U2AF29798.322ENSGALG00000052748U2AF26595.064Gallus_gallus
ENSPTRG00000011523U2AF29983.007ENSGAFG00000005628-10072.363Gambusia_affinis
ENSPTRG00000011523U2AF210094.788ENSGAFG00000013626u2af2a8888.655Gambusia_affinis
ENSPTRG00000011523U2AF210094.463ENSGACG00000010632U2AF210087.657Gasterosteus_aculeatus
ENSPTRG00000011523U2AF29981.877ENSGACG00000014500-10074.684Gasterosteus_aculeatus
ENSPTRG00000011523U2AF210099.674ENSGAGG00000011849U2AF210099.674Gopherus_agassizii
ENSPTRG00000011523U2AF28489.494ENSGGOG00000036399-9689.494Gorilla_gorilla
ENSPTRG00000011523U2AF29983.660ENSHBUG00000017424-10072.574Haplochromis_burtoni
ENSPTRG00000011523U2AF210095.114ENSHBUG00000013935u2af2a10089.076Haplochromis_burtoni
ENSPTRG00000011523U2AF2100100.000ENSHGLG00000005889U2AF2100100.000Heterocephalus_glaber_female
ENSPTRG00000011523U2AF210098.714ENSHGLG00100004757U2AF2100100.000Heterocephalus_glaber_male
ENSPTRG00000011523U2AF210091.693ENSHCOG00000019367u2af2a10086.749Hippocampus_comes
ENSPTRG00000011523U2AF29979.739ENSIPUG00000009844-10069.620Ictalurus_punctatus
ENSPTRG00000011523U2AF29992.182ENSIPUG00000009077u2af29984.025Ictalurus_punctatus
ENSPTRG00000011523U2AF210092.532ENSIPUG00000007717u2af2a10082.680Ictalurus_punctatus
ENSPTRG00000011523U2AF2100100.000ENSSTOG00000019595U2AF2100100.000Ictidomys_tridecemlineatus
ENSPTRG00000011523U2AF210099.789ENSJJAG00000017705U2af210099.789Jaculus_jaculus
ENSPTRG00000011523U2AF210094.463ENSKMAG00000005960u2af2a10088.445Kryptolebias_marmoratus
ENSPTRG00000011523U2AF29980.000ENSLBEG00000005001-8976.978Labrus_bergylta
ENSPTRG00000011523U2AF210094.137ENSLBEG00000016162u2af2a10088.866Labrus_bergylta
ENSPTRG00000011523U2AF210098.371ENSLACG00000001648U2AF210097.574Latimeria_chalumnae
ENSPTRG00000011523U2AF29983.987ENSLOCG00000010843-10072.785Lepisosteus_oculatus
ENSPTRG00000011523U2AF26295.288ENSLOCG00000008050u2af2b8095.035Lepisosteus_oculatus
ENSPTRG00000011523U2AF210090.228ENSLAFG00000028496-10085.474Loxodonta_africana
ENSPTRG00000011523U2AF2100100.000ENSLAFG00000018056-10099.368Loxodonta_africana
ENSPTRG00000011523U2AF2100100.000ENSMFAG00000038383U2AF2100100.000Macaca_fascicularis
ENSPTRG00000011523U2AF210099.789ENSMMUG00000004810U2AF210099.789Macaca_mulatta
ENSPTRG00000011523U2AF2100100.000ENSMNEG00000042096U2AF210099.158Macaca_nemestrina
ENSPTRG00000011523U2AF2100100.000ENSMLEG00000032219U2AF28999.129Mandrillus_leucophaeus
ENSPTRG00000011523U2AF210092.652ENSMAMG00000019817u2af2a10087.552Mastacembelus_armatus
ENSPTRG00000011523U2AF29981.699ENSMAMG00000020158-10071.519Mastacembelus_armatus
ENSPTRG00000011523U2AF210095.114ENSMZEG00005016563u2af2a10089.076Maylandia_zebra
ENSPTRG00000011523U2AF29983.660ENSMZEG00005023318-10072.574Maylandia_zebra
ENSPTRG00000011523U2AF210098.714ENSMAUG00000008180U2af29998.925Mesocricetus_auratus
ENSPTRG00000011523U2AF2100100.000ENSMICG00000027681U2AF210099.158Microcebus_murinus
ENSPTRG00000011523U2AF210096.743ENSMOCG00000001018-10096.743Microtus_ochrogaster
ENSPTRG00000011523U2AF210099.789ENSMOCG00000013214-10099.789Microtus_ochrogaster
ENSPTRG00000011523U2AF210091.857ENSMOCG00000007227-10086.526Microtus_ochrogaster
ENSPTRG00000011523U2AF29976.250ENSMMOG00000000531-10067.076Mola_mola
ENSPTRG00000011523U2AF210094.463ENSMMOG00000016600u2af2a9392.138Mola_mola
ENSPTRG00000011523U2AF210094.463ENSMALG00000009985u2af2a10088.470Monopterus_albus
ENSPTRG00000011523U2AF2100100.000MGP_CAROLIEiJ_G0029150U2af210099.789Mus_caroli
ENSPTRG00000011523U2AF2100100.000ENSMUSG00000030435U2af2100100.000Mus_musculus
ENSPTRG00000011523U2AF2100100.000MGP_PahariEiJ_G0021017U2af210099.789Mus_pahari
ENSPTRG00000011523U2AF2100100.000MGP_SPRETEiJ_G0030203U2af210099.789Mus_spretus
ENSPTRG00000011523U2AF2100100.000ENSMPUG00000007135U2AF210099.158Mustela_putorius_furo
ENSPTRG00000011523U2AF27794.606ENSMLUG00000011051-10095.851Myotis_lucifugus
ENSPTRG00000011523U2AF210099.579ENSNGAG00000020369U2af210099.579Nannospalax_galili
ENSPTRG00000011523U2AF29981.270ENSNBRG00000011100-8978.177Neolamprologus_brichardi
ENSPTRG00000011523U2AF210095.114ENSNBRG00000002568u2af2a10089.076Neolamprologus_brichardi
ENSPTRG00000011523U2AF2100100.000ENSNLEG00000010562U2AF2100100.000Nomascus_leucogenys
ENSPTRG00000011523U2AF210082.736ENSMEUG00000002346U2AF29082.809Notamacropus_eugenii
ENSPTRG00000011523U2AF210094.737ENSODEG00000012729-10094.737Octodon_degus
ENSPTRG00000011523U2AF29682.712ENSODEG00000009254-10069.492Octodon_degus
ENSPTRG00000011523U2AF29983.660ENSONIG00000009682-10072.574Oreochromis_niloticus
ENSPTRG00000011523U2AF210095.114ENSONIG00000012793u2af2a10088.889Oreochromis_niloticus
ENSPTRG00000011523U2AF210094.137ENSORLG00000011545u2af2a10086.737Oryzias_latipes
ENSPTRG00000011523U2AF210094.137ENSORLG00020006941u2af2a10086.737Oryzias_latipes_hni
ENSPTRG00000011523U2AF210094.137ENSORLG00015012843u2af2a10086.737Oryzias_latipes_hsok
ENSPTRG00000011523U2AF210094.137ENSOMEG00000011386u2af2a10088.421Oryzias_melastigma
ENSPTRG00000011523U2AF2100100.000ENSOGAG00000007206-100100.000Otolemur_garnettii
ENSPTRG00000011523U2AF29473.540ENSOGAG00000034729-8063.298Otolemur_garnettii
ENSPTRG00000011523U2AF210089.274ENSOARG00000001091U2AF210088.470Ovis_aries
ENSPTRG00000011523U2AF2100100.000ENSPPAG00000039782U2AF2100100.000Pan_paniscus
ENSPTRG00000011523U2AF2100100.000ENSPPRG00000013843U2AF2100100.000Panthera_pardus
ENSPTRG00000011523U2AF210091.346ENSPTIG00000005489U2AF29093.720Panthera_tigris_altaica
ENSPTRG00000011523U2AF2100100.000ENSPANG00000008459U2AF210099.158Papio_anubis
ENSPTRG00000011523U2AF210094.805ENSPKIG00000024346u2af2b9194.236Paramormyrops_kingsleyae
ENSPTRG00000011523U2AF29982.353ENSPKIG00000014878-10073.207Paramormyrops_kingsleyae
ENSPTRG00000011523U2AF29775.745ENSPSIG00000008014U2AF210075.745Pelodiscus_sinensis
ENSPTRG00000011523U2AF210084.858ENSPMGG00000022980u2af2a9284.173Periophthalmus_magnuspinnatus
ENSPTRG00000011523U2AF2100100.000ENSPEMG00000007378U2af2100100.000Peromyscus_maniculatus_bairdii
ENSPTRG00000011523U2AF29978.502ENSPMAG00000004097u2af2a8778.358Petromyzon_marinus
ENSPTRG00000011523U2AF210098.947ENSPCIG00000018013U2AF210098.947Phascolarctos_cinereus
ENSPTRG00000011523U2AF29994.771ENSPFOG00000010799u2af2a10088.632Poecilia_formosa
ENSPTRG00000011523U2AF29983.333ENSPFOG00000006433-10072.785Poecilia_formosa
ENSPTRG00000011523U2AF29983.333ENSPLAG00000003275-8979.902Poecilia_latipinna
ENSPTRG00000011523U2AF210094.788ENSPLAG00000014365u2af2a10088.655Poecilia_latipinna
ENSPTRG00000011523U2AF210094.788ENSPMEG00000002969u2af2a10088.655Poecilia_mexicana
ENSPTRG00000011523U2AF29983.333ENSPMEG00000003734-8979.657Poecilia_mexicana
ENSPTRG00000011523U2AF29983.007ENSPREG00000013036-10075.676Poecilia_reticulata
ENSPTRG00000011523U2AF210094.788ENSPREG00000008739u2af2a10088.655Poecilia_reticulata
ENSPTRG00000011523U2AF29298.195ENSPPYG00000010429-7898.195Pongo_abelii
ENSPTRG00000011523U2AF210083.654ENSPCAG00000014399-10083.193Procavia_capensis
ENSPTRG00000011523U2AF29984.314ENSPCAG00000003709-9981.463Procavia_capensis
ENSPTRG00000011523U2AF2100100.000ENSPCOG00000025870U2AF2100100.000Propithecus_coquereli
ENSPTRG00000011523U2AF210099.579ENSPVAG00000004540U2AF210099.579Pteropus_vampyrus
ENSPTRG00000011523U2AF210095.114ENSPNYG00000001438u2af2a10089.076Pundamilia_nyererei
ENSPTRG00000011523U2AF29983.660ENSPNYG00000011605-10072.574Pundamilia_nyererei
ENSPTRG00000011523U2AF29993.160ENSPNAG00000027289u2af2b9985.895Pygocentrus_nattereri
ENSPTRG00000011523U2AF29983.333ENSPNAG00000007182-10072.574Pygocentrus_nattereri
ENSPTRG00000011523U2AF210093.831ENSPNAG00000017620u2af2a10084.948Pygocentrus_nattereri
ENSPTRG00000011523U2AF2100100.000ENSRNOG00000015914U2af210099.158Rattus_norvegicus
ENSPTRG00000011523U2AF210099.789ENSRBIG00000041018U2AF210099.789Rhinopithecus_bieti
ENSPTRG00000011523U2AF28799.758ENSRROG00000031103-10099.758Rhinopithecus_roxellana
ENSPTRG00000011523U2AF210093.811ENSRROG00000031238-10093.684Rhinopithecus_roxellana
ENSPTRG00000011523U2AF2100100.000ENSSBOG00000023891U2AF210099.158Saimiri_boliviensis_boliviensis
ENSPTRG00000011523U2AF25189.270ENSSHAG00000001167U2AF28577.898Sarcophilus_harrisii
ENSPTRG00000011523U2AF210094.481ENSSFOG00015019182u2af2b8993.484Scleropages_formosus
ENSPTRG00000011523U2AF29982.026ENSSFOG00015003884-9481.061Scleropages_formosus
ENSPTRG00000011523U2AF29983.987ENSSMAG00000013779-10072.363Scophthalmus_maximus
ENSPTRG00000011523U2AF210093.811ENSSMAG00000012582u2af2a10087.815Scophthalmus_maximus
ENSPTRG00000011523U2AF29980.757ENSSDUG00000021434-8477.804Seriola_dumerili
ENSPTRG00000011523U2AF29994.444ENSSDUG00000009457u2af2a10088.842Seriola_dumerili
ENSPTRG00000011523U2AF210094.463ENSSLDG00000022742u2af2a10088.866Seriola_lalandi_dorsalis
ENSPTRG00000011523U2AF29980.757ENSSLDG00000016151-8977.804Seriola_lalandi_dorsalis
ENSPTRG00000011523U2AF210096.825ENSSPUG00000010229U2AF210094.203Sphenodon_punctatus
ENSPTRG00000011523U2AF29983.333ENSSPAG00000005241-10072.363Stegastes_partitus
ENSPTRG00000011523U2AF210094.788ENSSPAG00000022519u2af2a10089.076Stegastes_partitus
ENSPTRG00000011523U2AF2100100.000ENSSSCG00000034815U2AF210099.158Sus_scrofa
ENSPTRG00000011523U2AF210091.531ENSTRUG00000005514u2af2a9089.926Takifugu_rubripes
ENSPTRG00000011523U2AF210094.463ENSTNIG00000008106U2AF210088.445Tetraodon_nigroviridis
ENSPTRG00000011523U2AF29982.085ENSTNIG00000011257-10072.842Tetraodon_nigroviridis
ENSPTRG00000011523U2AF28694.403ENSTBEG00000009104U2AF210095.135Tupaia_belangeri
ENSPTRG00000011523U2AF2100100.000ENSTTRG00000000987U2AF2100100.000Tursiops_truncatus
ENSPTRG00000011523U2AF210098.714ENSUAMG00000019883U2AF210096.937Ursus_americanus
ENSPTRG00000011523U2AF2100100.000ENSUMAG00000024586U2AF2100100.000Ursus_maritimus
ENSPTRG00000011523U2AF2100100.000ENSVVUG00000006956U2AF26799.129Vulpes_vulpes
ENSPTRG00000011523U2AF210095.886ENSXETG00000019128u2af210092.562Xenopus_tropicalis
ENSPTRG00000011523U2AF210094.788ENSXCOG00000019406u2af2a9292.383Xiphophorus_couchianus
ENSPTRG00000011523U2AF210094.788ENSXMAG00000011979u2af2a10088.655Xiphophorus_maculatus
ENSPTRG00000011523U2AF29982.680ENSXMAG00000000768-9672.152Xiphophorus_maculatus

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