EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000011889 (Gene tree)
Gene ID: 738521
Gene Symbol: SRBD1
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 224400 bases
Position: chr2A:46405228-46629627
Accession: 383
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000020409	S1	PF00575.23	7.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000022120	-	3618	XM_009442416	ENSPTRP00000020409	995 (aa)	XP_009440691	H2QHU9
ENSPTRT00000095467	-	2889	-	ENSPTRP00000074605	962 (aa)	-	A0A2I3SC31

Gene Model

Click here to download ENSPTRG00000011889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000011889's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000011889	SRBD1	100	98.995	ENSG00000068784	SRBD1	100	98.995	Homo_sapiens
ENSPTRG00000011889	SRBD1	100	51.613	ENSAPOG00000005103	si:ch211-117n7.8	83	57.851	Acanthochromis_polyacanthus
ENSPTRG00000011889	SRBD1	100	90.754	ENSAMEG00000005993	SRBD1	100	90.754	Ailuropoda_melanoleuca
ENSPTRG00000011889	SRBD1	94	53.002	ENSACIG00000009875	si:ch211-117n7.8	97	52.615	Amphilophus_citrinellus
ENSPTRG00000011889	SRBD1	98	52.083	ENSAOCG00000024718	si:ch211-117n7.8	84	57.733	Amphiprion_ocellaris
ENSPTRG00000011889	SRBD1	83	57.733	ENSAPEG00000002645	si:ch211-117n7.8	87	57.733	Amphiprion_percula
ENSPTRG00000011889	SRBD1	84	57.444	ENSATEG00000010844	si:ch211-117n7.8	84	57.444	Anabas_testudineus
ENSPTRG00000011889	SRBD1	100	70.189	ENSAPLG00000006313	SRBD1	100	69.760	Anas_platyrhynchos
ENSPTRG00000011889	SRBD1	100	94.271	ENSANAG00000025573	SRBD1	100	94.271	Aotus_nancymaae
ENSPTRG00000011889	SRBD1	99	50.532	ENSACLG00000024219	si:ch211-117n7.8	94	52.508	Astatotilapia_calliptera
ENSPTRG00000011889	SRBD1	86	59.631	ENSAMXG00000004294	SRBD1	93	55.975	Astyanax_mexicanus
ENSPTRG00000011889	SRBD1	100	88.554	ENSBTAG00000007508	SRBD1	97	89.257	Bos_taurus
ENSPTRG00000011889	SRBD1	73	30.106	WBGene00022830	ZK973.1	91	30.504	Caenorhabditis_elegans
ENSPTRG00000011889	SRBD1	100	93.367	ENSCJAG00000000727	SRBD1	100	93.367	Callithrix_jacchus
ENSPTRG00000011889	SRBD1	100	90.271	ENSCAFG00000002554	SRBD1	100	90.271	Canis_familiaris
ENSPTRG00000011889	SRBD1	100	87.349	ENSCAFG00020026284	SRBD1	99	90.360	Canis_lupus_dingo
ENSPTRG00000011889	SRBD1	100	88.755	ENSCHIG00000016535	SRBD1	98	89.458	Capra_hircus
ENSPTRG00000011889	SRBD1	100	91.082	ENSTSYG00000012797	SRBD1	100	91.082	Carlito_syrichta
ENSPTRG00000011889	SRBD1	100	87.550	ENSCPOG00000004773	SRBD1	100	87.048	Cavia_porcellus
ENSPTRG00000011889	SRBD1	100	94.472	ENSCCAG00000025589	SRBD1	100	94.472	Cebus_capucinus
ENSPTRG00000011889	SRBD1	100	96.985	ENSCATG00000039530	SRBD1	100	96.985	Cercocebus_atys
ENSPTRG00000011889	SRBD1	100	88.778	ENSCLAG00000008623	SRBD1	100	88.277	Chinchilla_lanigera
ENSPTRG00000011889	SRBD1	100	97.085	ENSCSAG00000013350	SRBD1	100	97.085	Chlorocebus_sabaeus
ENSPTRG00000011889	SRBD1	93	76.336	ENSCHOG00000003805	SRBD1	93	76.336	Choloepus_hoffmanni
ENSPTRG00000011889	SRBD1	100	73.500	ENSCPBG00000005677	SRBD1	100	72.846	Chrysemys_picta_bellii
ENSPTRG00000011889	SRBD1	79	42.025	ENSCING00000005950	-	99	42.025	Ciona_intestinalis
ENSPTRG00000011889	SRBD1	79	42.821	ENSCSAVG00000000861	-	99	42.695	Ciona_savignyi
ENSPTRG00000011889	SRBD1	99	96.475	ENSCANG00000016307	SRBD1	99	96.475	Colobus_angolensis_palliatus
ENSPTRG00000011889	SRBD1	100	84.770	ENSCGRG00001000513	Srbd1	100	84.770	Cricetulus_griseus_chok1gshd
ENSPTRG00000011889	SRBD1	100	84.770	ENSCGRG00000002283	Srbd1	100	84.770	Cricetulus_griseus_crigri
ENSPTRG00000011889	SRBD1	97	51.411	ENSCSEG00000000856	si:ch211-117n7.8	84	56.776	Cynoglossus_semilaevis
ENSPTRG00000011889	SRBD1	83	56.368	ENSCVAG00000020212	si:ch211-117n7.8	89	56.368	Cyprinodon_variegatus
ENSPTRG00000011889	SRBD1	100	89.790	ENSDNOG00000018686	SRBD1	100	89.790	Dasypus_novemcinctus
ENSPTRG00000011889	SRBD1	100	86.432	ENSDORG00000010468	Srbd1	100	86.432	Dipodomys_ordii
ENSPTRG00000011889	SRBD1	94	34.245	FBgn0051156	CG31156	79	36.679	Drosophila_melanogaster
ENSPTRG00000011889	SRBD1	89	82.321	ENSETEG00000000739	SRBD1	91	82.321	Echinops_telfairi
ENSPTRG00000011889	SRBD1	73	48.844	ENSEBUG00000008902	si:ch211-117n7.8	96	48.844	Eptatretus_burgeri
ENSPTRG00000011889	SRBD1	100	88.554	ENSEASG00005003132	SRBD1	97	94.904	Equus_asinus_asinus
ENSPTRG00000011889	SRBD1	100	91.667	ENSECAG00000013865	SRBD1	98	91.667	Equus_caballus
ENSPTRG00000011889	SRBD1	97	54.582	ENSELUG00000012592	si:ch211-117n7.8	80	59.501	Esox_lucius
ENSPTRG00000011889	SRBD1	100	91.365	ENSFCAG00000005101	SRBD1	100	91.365	Felis_catus
ENSPTRG00000011889	SRBD1	100	67.723	ENSFALG00000012966	SRBD1	100	67.700	Ficedula_albicollis
ENSPTRG00000011889	SRBD1	99	86.179	ENSFDAG00000016670	SRBD1	98	87.214	Fukomys_damarensis
ENSPTRG00000011889	SRBD1	95	53.148	ENSFHEG00000019480	si:ch211-117n7.8	82	57.783	Fundulus_heteroclitus
ENSPTRG00000011889	SRBD1	50	52.477	ENSGMOG00000018010	-	100	52.477	Gadus_morhua
ENSPTRG00000011889	SRBD1	100	70.060	ENSGALG00000009990	SRBD1	100	68.955	Gallus_gallus
ENSPTRG00000011889	SRBD1	98	50.849	ENSGAFG00000019664	si:ch211-117n7.8	97	51.160	Gambusia_affinis
ENSPTRG00000011889	SRBD1	62	60.320	ENSGACG00000010794	si:ch211-117n7.8	100	60.480	Gasterosteus_aculeatus
ENSPTRG00000011889	SRBD1	83	81.325	ENSGAGG00000006166	SRBD1	99	81.325	Gopherus_agassizii
ENSPTRG00000011889	SRBD1	97	99.174	ENSGGOG00000005910	SRBD1	100	99.174	Gorilla_gorilla
ENSPTRG00000011889	SRBD1	90	47.826	ENSHBUG00000013207	si:ch211-117n7.8	86	50.179	Haplochromis_burtoni
ENSPTRG00000011889	SRBD1	99	88.318	ENSHGLG00000018153	-	99	88.318	Heterocephalus_glaber_female
ENSPTRG00000011889	SRBD1	99	88.117	ENSHGLG00100015183	-	99	88.117	Heterocephalus_glaber_male
ENSPTRG00000011889	SRBD1	85	60.915	ENSIPUG00000009661	srbd1	95	55.876	Ictalurus_punctatus
ENSPTRG00000011889	SRBD1	100	90.854	ENSSTOG00000005898	SRBD1	100	90.854	Ictidomys_tridecemlineatus
ENSPTRG00000011889	SRBD1	100	80.742	ENSJJAG00000022244	Srbd1	100	80.742	Jaculus_jaculus
ENSPTRG00000011889	SRBD1	98	51.597	ENSKMAG00000003473	si:ch211-117n7.8	83	56.840	Kryptolebias_marmoratus
ENSPTRG00000011889	SRBD1	98	51.933	ENSLBEG00000027518	si:ch211-117n7.8	83	57.008	Labrus_bergylta
ENSPTRG00000011889	SRBD1	85	70.567	ENSLACG00000009790	SRBD1	99	71.018	Latimeria_chalumnae
ENSPTRG00000011889	SRBD1	100	57.582	ENSLOCG00000016360	si:ch211-117n7.8	99	56.585	Lepisosteus_oculatus
ENSPTRG00000011889	SRBD1	100	97.286	ENSMFAG00000042026	SRBD1	100	97.286	Macaca_fascicularis
ENSPTRG00000011889	SRBD1	100	96.985	ENSMMUG00000003490	SRBD1	100	96.985	Macaca_mulatta
ENSPTRG00000011889	SRBD1	100	94.774	ENSMNEG00000034701	SRBD1	100	94.774	Macaca_nemestrina
ENSPTRG00000011889	SRBD1	100	96.884	ENSMLEG00000000745	SRBD1	100	96.884	Mandrillus_leucophaeus
ENSPTRG00000011889	SRBD1	82	56.250	ENSMAMG00000021921	si:ch211-117n7.8	84	56.169	Mastacembelus_armatus
ENSPTRG00000011889	SRBD1	99	50.532	ENSMZEG00005027369	si:ch211-117n7.8	94	52.508	Maylandia_zebra
ENSPTRG00000011889	SRBD1	80	75.063	ENSMGAG00000010273	SRBD1	100	75.063	Meleagris_gallopavo
ENSPTRG00000011889	SRBD1	79	86.224	ENSMAUG00000013916	Srbd1	99	83.768	Mesocricetus_auratus
ENSPTRG00000011889	SRBD1	100	92.369	ENSMICG00000007835	SRBD1	100	92.369	Microcebus_murinus
ENSPTRG00000011889	SRBD1	100	83.936	ENSMOCG00000018716	Srbd1	100	83.936	Microtus_ochrogaster
ENSPTRG00000011889	SRBD1	84	56.052	ENSMMOG00000007507	si:ch211-117n7.8	87	56.052	Mola_mola
ENSPTRG00000011889	SRBD1	99	50.484	ENSMALG00000001562	si:ch211-117n7.8	86	55.455	Monopterus_albus
ENSPTRG00000011889	SRBD1	100	82.111	MGP_CAROLIEiJ_G0021934	Srbd1	99	84.026	Mus_caroli
ENSPTRG00000011889	SRBD1	100	82.312	ENSMUSG00000024135	Srbd1	100	82.312	Mus_musculus
ENSPTRG00000011889	SRBD1	100	81.407	MGP_PahariEiJ_G0020924	Srbd1	100	81.407	Mus_pahari
ENSPTRG00000011889	SRBD1	100	82.412	MGP_SPRETEiJ_G0022850	Srbd1	100	82.412	Mus_spretus
ENSPTRG00000011889	SRBD1	100	87.450	ENSMLUG00000007039	SRBD1	100	87.450	Myotis_lucifugus
ENSPTRG00000011889	SRBD1	100	83.284	ENSNGAG00000011893	Srbd1	100	82.893	Nannospalax_galili
ENSPTRG00000011889	SRBD1	98	50.100	ENSNBRG00000012873	si:ch211-117n7.8	85	55.872	Neolamprologus_brichardi
ENSPTRG00000011889	SRBD1	100	98.492	ENSNLEG00000016877	SRBD1	100	98.492	Nomascus_leucogenys
ENSPTRG00000011889	SRBD1	100	84.925	ENSODEG00000012095	SRBD1	100	84.523	Octodon_degus
ENSPTRG00000011889	SRBD1	99	50.914	ENSONIG00000000945	si:ch211-117n7.8	100	58.103	Oreochromis_niloticus
ENSPTRG00000011889	SRBD1	100	91.365	ENSOCUG00000015385	SRBD1	100	91.365	Oryctolagus_cuniculus
ENSPTRG00000011889	SRBD1	85	53.502	ENSORLG00000004427	si:ch211-117n7.8	81	54.064	Oryzias_latipes
ENSPTRG00000011889	SRBD1	99	50.476	ENSORLG00020012792	si:ch211-117n7.8	82	57.294	Oryzias_latipes_hni
ENSPTRG00000011889	SRBD1	86	56.128	ENSORLG00015018598	si:ch211-117n7.8	82	56.890	Oryzias_latipes_hsok
ENSPTRG00000011889	SRBD1	98	49.559	ENSOMEG00000012229	si:ch211-117n7.8	82	56.095	Oryzias_melastigma
ENSPTRG00000011889	SRBD1	100	84.739	ENSOGAG00000001076	SRBD1	100	84.739	Otolemur_garnettii
ENSPTRG00000011889	SRBD1	100	84.190	ENSOARG00000005958	SRBD1	100	84.869	Ovis_aries
ENSPTRG00000011889	SRBD1	100	99.799	ENSPPAG00000038442	SRBD1	100	99.799	Pan_paniscus
ENSPTRG00000011889	SRBD1	100	91.357	ENSPPRG00000003449	SRBD1	100	91.357	Panthera_pardus
ENSPTRG00000011889	SRBD1	100	91.457	ENSPTIG00000012495	SRBD1	100	91.457	Panthera_tigris_altaica
ENSPTRG00000011889	SRBD1	100	96.884	ENSPANG00000008063	SRBD1	100	96.884	Papio_anubis
ENSPTRG00000011889	SRBD1	96	54.745	ENSPKIG00000021973	si:ch211-117n7.8	97	54.461	Paramormyrops_kingsleyae
ENSPTRG00000011889	SRBD1	100	72.545	ENSPSIG00000008992	SRBD1	100	72.627	Pelodiscus_sinensis
ENSPTRG00000011889	SRBD1	89	53.122	ENSPMGG00000013348	si:ch211-117n7.8	98	50.301	Periophthalmus_magnuspinnatus
ENSPTRG00000011889	SRBD1	100	82.728	ENSPEMG00000020684	Srbd1	100	82.728	Peromyscus_maniculatus_bairdii
ENSPTRG00000011889	SRBD1	98	51.142	ENSPFOG00000010650	si:ch211-117n7.8	83	56.389	Poecilia_formosa
ENSPTRG00000011889	SRBD1	98	51.539	ENSPLAG00000002141	si:ch211-117n7.8	83	57.075	Poecilia_latipinna
ENSPTRG00000011889	SRBD1	98	51.241	ENSPMEG00000018537	si:ch211-117n7.8	83	56.958	Poecilia_mexicana
ENSPTRG00000011889	SRBD1	97	51.457	ENSPREG00000003258	si:ch211-117n7.8	86	56.792	Poecilia_reticulata
ENSPTRG00000011889	SRBD1	100	90.332	ENSPPYG00000012444	SRBD1	99	90.332	Pongo_abelii
ENSPTRG00000011889	SRBD1	82	81.830	ENSPCAG00000005629	SRBD1	85	81.830	Procavia_capensis
ENSPTRG00000011889	SRBD1	100	79.980	ENSPCOG00000017669	SRBD1	100	79.980	Propithecus_coquereli
ENSPTRG00000011889	SRBD1	100	80.905	ENSPVAG00000001782	SRBD1	100	80.905	Pteropus_vampyrus
ENSPTRG00000011889	SRBD1	90	51.659	ENSPNYG00000000508	si:ch211-117n7.8	86	54.255	Pundamilia_nyererei
ENSPTRG00000011889	SRBD1	96	57.158	ENSPNAG00000013492	SRBD1	95	56.078	Pygocentrus_nattereri
ENSPTRG00000011889	SRBD1	100	81.024	ENSRNOG00000014720	Srbd1	99	81.727	Rattus_norvegicus
ENSPTRG00000011889	SRBD1	99	96.677	ENSRBIG00000033486	SRBD1	99	96.677	Rhinopithecus_bieti
ENSPTRG00000011889	SRBD1	99	96.677	ENSRROG00000041599	SRBD1	99	96.677	Rhinopithecus_roxellana
ENSPTRG00000011889	SRBD1	100	94.372	ENSSBOG00000024982	SRBD1	100	94.372	Saimiri_boliviensis_boliviensis
ENSPTRG00000011889	SRBD1	87	58.200	ENSSFOG00015001128	si:ch211-117n7.8	90	59.882	Scleropages_formosus
ENSPTRG00000011889	SRBD1	98	51.378	ENSSMAG00000018256	si:ch211-117n7.8	82	57.227	Scophthalmus_maximus
ENSPTRG00000011889	SRBD1	85	56.617	ENSSLDG00000023189	si:ch211-117n7.8	83	57.193	Seriola_lalandi_dorsalis
ENSPTRG00000011889	SRBD1	100	78.593	ENSSARG00000009740	SRBD1	100	78.593	Sorex_araneus
ENSPTRG00000011889	SRBD1	85	77.541	ENSSPUG00000010475	SRBD1	92	78.356	Sphenodon_punctatus
ENSPTRG00000011889	SRBD1	84	54.642	ENSSPAG00000008092	-	95	50.615	Stegastes_partitus
ENSPTRG00000011889	SRBD1	100	89.759	ENSSSCG00000008445	SRBD1	98	90.361	Sus_scrofa
ENSPTRG00000011889	SRBD1	83	76.988	ENSTGUG00000003878	SRBD1	100	76.988	Taeniopygia_guttata
ENSPTRG00000011889	SRBD1	99	50.772	ENSTRUG00000007080	si:ch211-117n7.8	93	56.909	Takifugu_rubripes
ENSPTRG00000011889	SRBD1	99	50.245	ENSTNIG00000007464	si:ch211-117n7.8	99	50.000	Tetraodon_nigroviridis
ENSPTRG00000011889	SRBD1	83	98.936	ENSTBEG00000004556	SRBD1	82	98.936	Tupaia_belangeri
ENSPTRG00000011889	SRBD1	94	92.166	ENSTTRG00000011871	SRBD1	94	92.166	Tursiops_truncatus
ENSPTRG00000011889	SRBD1	100	90.562	ENSUAMG00000008126	SRBD1	97	95.290	Ursus_americanus
ENSPTRG00000011889	SRBD1	100	90.562	ENSUMAG00000012902	SRBD1	98	90.562	Ursus_maritimus
ENSPTRG00000011889	SRBD1	91	91.621	ENSVPAG00000006825	SRBD1	100	91.621	Vicugna_pacos
ENSPTRG00000011889	SRBD1	100	89.759	ENSVVUG00000005389	SRBD1	100	90.361	Vulpes_vulpes
ENSPTRG00000011889	SRBD1	100	52.802	ENSXETG00000002760	srbd1	100	52.733	Xenopus_tropicalis
ENSPTRG00000011889	SRBD1	98	50.844	ENSXMAG00000016861	si:ch211-117n7.8	83	56.722	Xiphophorus_maculatus