EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000011989 (Gene tree)
Gene ID: 459280
Gene Symbol: RAB1A
Alias: -
Full Name: RAB1A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 43074 bases
Position: chr2A:66458513-66501586
Accession: 10442
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000089317	MMR_HSR1	PF01926.23	2.5e-05	1	1
ENSPTRP00000020588	MMR_HSR1	PF01926.23	2.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000102412	-	2411	XM_016948642	ENSPTRP00000071716	129 (aa)	XP_016804131	A0A2I3S4G0
ENSPTRT00000093837	-	426	-	ENSPTRP00000089444	141 (aa)	-	A0A2I3TJL3
ENSPTRT00000102030	-	522	-	ENSPTRP00000072353	173 (aa)	-	A0A2I3S736
ENSPTRT00000077995	-	609	-	ENSPTRP00000089317	202 (aa)	-	A0A2I3TK83
ENSPTRT00000102135	-	2616	XM_016948641	ENSPTRP00000081402	158 (aa)	-	A0A2I3SXU3
ENSPTRT00000022309	-	2748	XM_016948640	ENSPTRP00000020588	205 (aa)	XP_016804129	H2QHZ8

Gene Model

Click here to download ENSPTRG00000011989's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000011989's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000011989	RAB1A	58	32.203	ENSPTRG00000014572	ARL8B	61	32.203
ENSPTRG00000011989	RAB1A	96	43.590	ENSPTRG00000009194	RAB5C	90	43.590
ENSPTRG00000011989	RAB1A	96	51.269	ENSPTRG00000001370	RAB13	97	51.269
ENSPTRG00000011989	RAB1A	86	43.820	ENSPTRG00000048400	-	84	43.820
ENSPTRG00000011989	RAB1A	79	39.264	ENSPTRG00000015359	RAB7A	79	39.264
ENSPTRG00000011989	RAB1A	99	53.960	ENSPTRG00000005524	RAB35	100	53.960
ENSPTRG00000011989	RAB1A	100	45.581	ENSPTRG00000010422	RAB11B	99	45.581
ENSPTRG00000011989	RAB1A	96	36.410	ENSPTRG00000048374	RAB6B	94	36.410
ENSPTRG00000011989	RAB1A	58	31.933	ENSPTRG00000048701	ARL4A	59	31.933
ENSPTRG00000011989	RAB1A	99	93.069	ENSPTRG00000003915	RAB1B	100	93.069
ENSPTRG00000011989	RAB1A	58	31.092	ENSPTRG00000013065	ARL4C	59	31.092
ENSPTRG00000011989	RAB1A	84	50.588	ENSPTRG00000006125	-	95	50.581
ENSPTRG00000011989	RAB1A	85	52.299	ENSPTRG00000044358	-	81	52.299
ENSPTRG00000011989	RAB1A	96	43.367	ENSPTRG00000005071	RAB5B	89	43.367
ENSPTRG00000011989	RAB1A	90	46.703	ENSPTRG00000002384	RAB18	93	45.876
ENSPTRG00000011989	RAB1A	89	32.973	ENSPTRG00000004731	RERG	90	32.973
ENSPTRG00000011989	RAB1A	58	31.933	ENSPTRG00000043505	-	59	31.933
ENSPTRG00000011989	RAB1A	85	35.632	ENSPTRG00000015445	MRAS	83	35.632
ENSPTRG00000011989	RAB1A	78	39.752	ENSPTRG00000008931	RAB34	62	39.752
ENSPTRG00000011989	RAB1A	77	39.623	ENSPTRG00000028227	RAB9B	79	39.623
ENSPTRG00000011989	RAB1A	52	57.944	ENSPTRG00000006446	-	90	57.944
ENSPTRG00000011989	RAB1A	91	48.087	ENSPTRG00000020284	RAB2A	99	45.238
ENSPTRG00000011989	RAB1A	58	34.746	ENSPTRG00000001846	ARL8A	61	34.746
ENSPTRG00000011989	RAB1A	83	32.544	ENSPTRG00000046866	RHEB	91	32.544
ENSPTRG00000011989	RAB1A	96	38.384	ENSPTRG00000044137	RAB6A	94	38.384
ENSPTRG00000011989	RAB1A	81	46.386	ENSPTRG00000001446	RAB25	78	46.386
ENSPTRG00000011989	RAB1A	84	43.678	ENSPTRG00000016455	RAB33B	76	43.678
ENSPTRG00000011989	RAB1A	96	39.086	ENSPTRG00000044969	RAB22A	97	39.086
ENSPTRG00000011989	RAB1A	81	30.233	ENSPTRG00000011719	DNAJC27	93	30.303
ENSPTRG00000011989	RAB1A	81	37.805	ENSPTRG00000004775	KRAS	95	35.912
ENSPTRG00000011989	RAB1A	85	49.711	ENSPTRG00000009853	RAB12	71	49.425
ENSPTRG00000011989	RAB1A	58	33.058	ENSPTRG00000034478	ARL2	61	33.058
ENSPTRG00000011989	RAB1A	84	33.526	ENSPTRG00000043341	RAB23	73	33.526
ENSPTRG00000011989	RAB1A	77	39.623	ENSPTRG00000021673	RAB9A	79	39.623
ENSPTRG00000011989	RAB1A	81	35.366	ENSPTRG00000014555	-	66	35.366
ENSPTRG00000011989	RAB1A	96	43.878	ENSPTRG00000014682	RAB5A	90	43.878
ENSPTRG00000011989	RAB1A	81	50.610	ENSPTRG00000004125	RAB30	82	50.602
ENSPTRG00000011989	RAB1A	99	44.554	ENSPTRG00000021312	RAB14	93	44.554
ENSPTRG00000011989	RAB1A	81	38.415	ENSPTRG00000001140	NRAS	91	38.650
ENSPTRG00000011989	RAB1A	85	35.028	ENSPTRG00000034469	HRAS	93	35.028
ENSPTRG00000011989	RAB1A	75	32.450	ENSPTRG00000048075	-	81	32.450
ENSPTRG00000011989	RAB1A	86	43.820	ENSPTRG00000042083	RAB39B	84	43.820

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000011989	RAB1A	100	100.000	ENSG00000138069	RAB1A	100	100.000	Homo_sapiens
ENSPTRG00000011989	RAB1A	99	95.545	ENSAPOG00000008143	-	100	95.545	Acanthochromis_polyacanthus
ENSPTRG00000011989	RAB1A	100	100.000	ENSAMEG00000001127	RAB1A	100	100.000	Ailuropoda_melanoleuca
ENSPTRG00000011989	RAB1A	99	95.545	ENSAOCG00000020606	-	100	95.545	Amphiprion_ocellaris
ENSPTRG00000011989	RAB1A	99	95.545	ENSAPEG00000022488	-	100	95.545	Amphiprion_percula
ENSPTRG00000011989	RAB1A	100	100.000	ENSANAG00000020929	RAB1A	100	100.000	Aotus_nancymaae
ENSPTRG00000011989	RAB1A	99	96.040	ENSACLG00000003326	-	100	96.040	Astatotilapia_calliptera
ENSPTRG00000011989	RAB1A	99	94.554	ENSAMXG00000034850	-	100	94.554	Astyanax_mexicanus
ENSPTRG00000011989	RAB1A	100	100.000	ENSBTAG00000016720	RAB1A	100	100.000	Bos_taurus
ENSPTRG00000011989	RAB1A	100	100.000	ENSCJAG00000046275	RAB1A	100	100.000	Callithrix_jacchus
ENSPTRG00000011989	RAB1A	100	100.000	ENSCAFG00000003187	RAB1A	100	100.000	Canis_familiaris
ENSPTRG00000011989	RAB1A	100	100.000	ENSCAFG00020026971	RAB1A	100	100.000	Canis_lupus_dingo
ENSPTRG00000011989	RAB1A	99	99.000	ENSCHIG00000014060	RAB1A	98	99.000	Capra_hircus
ENSPTRG00000011989	RAB1A	100	98.049	ENSTSYG00000005996	RAB1A	100	100.000	Carlito_syrichta
ENSPTRG00000011989	RAB1A	100	100.000	ENSCPOG00000015437	RAB1A	100	100.000	Cavia_porcellus
ENSPTRG00000011989	RAB1A	100	100.000	ENSCCAG00000021869	RAB1A	100	100.000	Cebus_capucinus
ENSPTRG00000011989	RAB1A	100	100.000	ENSCATG00000030853	RAB1A	100	100.000	Cercocebus_atys
ENSPTRG00000011989	RAB1A	100	100.000	ENSCLAG00000014766	RAB1A	100	100.000	Chinchilla_lanigera
ENSPTRG00000011989	RAB1A	100	99.512	ENSCPBG00000013243	RAB1A	100	99.512	Chrysemys_picta_bellii
ENSPTRG00000011989	RAB1A	100	97.561	ENSCANG00000035916	RAB1A	100	97.561	Colobus_angolensis_palliatus
ENSPTRG00000011989	RAB1A	100	100.000	ENSCGRG00001012691	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSPTRG00000011989	RAB1A	100	100.000	ENSCGRG00000008456	-	100	100.000	Cricetulus_griseus_crigri
ENSPTRG00000011989	RAB1A	100	100.000	ENSDNOG00000018236	RAB1A	100	100.000	Dasypus_novemcinctus
ENSPTRG00000011989	RAB1A	100	100.000	ENSDORG00000028628	-	100	100.000	Dipodomys_ordii
ENSPTRG00000011989	RAB1A	100	84.466	FBgn0285937	Rab1	100	84.466	Drosophila_melanogaster
ENSPTRG00000011989	RAB1A	99	100.000	ENSETEG00000002205	RAB1A	100	100.000	Echinops_telfairi
ENSPTRG00000011989	RAB1A	100	100.000	ENSEASG00005007298	RAB1A	100	100.000	Equus_asinus_asinus
ENSPTRG00000011989	RAB1A	100	100.000	ENSECAG00000009926	RAB1A	100	100.000	Equus_caballus
ENSPTRG00000011989	RAB1A	99	100.000	ENSEEUG00000011721	RAB1A	100	100.000	Erinaceus_europaeus
ENSPTRG00000011989	RAB1A	99	95.588	ENSELUG00000012166	RAB1A	96	95.588	Esox_lucius
ENSPTRG00000011989	RAB1A	100	100.000	ENSFCAG00000002536	RAB1A	100	100.000	Felis_catus
ENSPTRG00000011989	RAB1A	98	98.990	ENSFALG00000013624	RAB1A	99	97.537	Ficedula_albicollis
ENSPTRG00000011989	RAB1A	100	100.000	ENSFDAG00000019505	-	100	100.000	Fukomys_damarensis
ENSPTRG00000011989	RAB1A	99	94.554	ENSFHEG00000014414	-	100	94.554	Fundulus_heteroclitus
ENSPTRG00000011989	RAB1A	100	99.512	ENSGALG00000031582	RAB1A	100	99.512	Gallus_gallus
ENSPTRG00000011989	RAB1A	99	94.554	ENSGAFG00000000918	-	100	94.554	Gambusia_affinis
ENSPTRG00000011989	RAB1A	100	99.512	ENSGAGG00000006802	RAB1A	100	99.512	Gopherus_agassizii
ENSPTRG00000011989	RAB1A	100	100.000	ENSGGOG00000026603	RAB1A	100	100.000	Gorilla_gorilla
ENSPTRG00000011989	RAB1A	100	100.000	ENSHGLG00000013585	RAB1A	100	100.000	Heterocephalus_glaber_female
ENSPTRG00000011989	RAB1A	100	98.039	ENSHGLG00100007994	RAB1A	100	98.039	Heterocephalus_glaber_male
ENSPTRG00000011989	RAB1A	100	100.000	ENSSTOG00000020693	-	100	100.000	Ictidomys_tridecemlineatus
ENSPTRG00000011989	RAB1A	98	100.000	ENSJJAG00000014396	Rab1a	100	100.000	Jaculus_jaculus
ENSPTRG00000011989	RAB1A	98	95.431	ENSKMAG00000014038	-	93	95.431	Kryptolebias_marmoratus
ENSPTRG00000011989	RAB1A	99	95.050	ENSLBEG00000028426	RAB1A	100	95.050	Labrus_bergylta
ENSPTRG00000011989	RAB1A	100	98.537	ENSLACG00000012869	RAB1A	100	98.537	Latimeria_chalumnae
ENSPTRG00000011989	RAB1A	100	100.000	ENSLAFG00000016666	RAB1A	100	100.000	Loxodonta_africana
ENSPTRG00000011989	RAB1A	100	100.000	ENSMFAG00000046246	RAB1A	100	100.000	Macaca_fascicularis
ENSPTRG00000011989	RAB1A	98	99.495	ENSMMUG00000021721	RAB1A	92	99.495	Macaca_mulatta
ENSPTRG00000011989	RAB1A	95	99.485	ENSMNEG00000028414	-	97	99.485	Macaca_nemestrina
ENSPTRG00000011989	RAB1A	100	100.000	ENSMLEG00000042535	RAB1A	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000011989	RAB1A	99	96.040	ENSMZEG00005013959	-	100	96.040	Maylandia_zebra
ENSPTRG00000011989	RAB1A	98	98.990	ENSMGAG00000004611	RAB1A	98	99.492	Meleagris_gallopavo
ENSPTRG00000011989	RAB1A	100	99.512	ENSMAUG00000012156	Rab1a	100	99.512	Mesocricetus_auratus
ENSPTRG00000011989	RAB1A	100	100.000	ENSMICG00000012587	RAB1A	100	100.000	Microcebus_murinus
ENSPTRG00000011989	RAB1A	100	99.512	ENSMOCG00000017022	Rab1a	100	99.512	Microtus_ochrogaster
ENSPTRG00000011989	RAB1A	99	93.564	ENSMMOG00000018709	RAB1A	100	93.564	Mola_mola
ENSPTRG00000011989	RAB1A	100	99.512	ENSMODG00000003340	RAB1A	100	99.512	Monodelphis_domestica
ENSPTRG00000011989	RAB1A	100	100.000	MGP_CAROLIEiJ_G0016115	Rab1a	100	100.000	Mus_caroli
ENSPTRG00000011989	RAB1A	100	100.000	ENSMUSG00000020149	Rab1a	100	100.000	Mus_musculus
ENSPTRG00000011989	RAB1A	100	100.000	MGP_PahariEiJ_G0016776	Rab1a	100	100.000	Mus_pahari
ENSPTRG00000011989	RAB1A	100	100.000	MGP_SPRETEiJ_G0016958	Rab1a	100	100.000	Mus_spretus
ENSPTRG00000011989	RAB1A	100	100.000	ENSMPUG00000006139	RAB1A	82	100.000	Mustela_putorius_furo
ENSPTRG00000011989	RAB1A	100	100.000	ENSMLUG00000009489	RAB1A	100	100.000	Myotis_lucifugus
ENSPTRG00000011989	RAB1A	100	100.000	ENSNGAG00000005838	Rab1a	100	100.000	Nannospalax_galili
ENSPTRG00000011989	RAB1A	99	96.040	ENSNBRG00000020492	-	100	96.040	Neolamprologus_brichardi
ENSPTRG00000011989	RAB1A	98	100.000	ENSOPRG00000006595	RAB1A	100	100.000	Ochotona_princeps
ENSPTRG00000011989	RAB1A	95	100.000	ENSODEG00000011248	-	96	100.000	Octodon_degus
ENSPTRG00000011989	RAB1A	99	93.627	ENSONIG00000006819	-	100	93.627	Oreochromis_niloticus
ENSPTRG00000011989	RAB1A	100	99.512	ENSOANG00000012438	RAB1A	100	99.512	Ornithorhynchus_anatinus
ENSPTRG00000011989	RAB1A	100	100.000	ENSOCUG00000017003	RAB1A	100	100.000	Oryctolagus_cuniculus
ENSPTRG00000011989	RAB1A	100	100.000	ENSOGAG00000026181	RAB1A	100	100.000	Otolemur_garnettii
ENSPTRG00000011989	RAB1A	98	99.495	ENSOARG00000019997	RAB1A	98	99.495	Ovis_aries
ENSPTRG00000011989	RAB1A	100	100.000	ENSPPAG00000030253	RAB1A	100	100.000	Pan_paniscus
ENSPTRG00000011989	RAB1A	100	100.000	ENSPPRG00000025077	RAB1A	100	100.000	Panthera_pardus
ENSPTRG00000011989	RAB1A	98	99.495	ENSPTIG00000013471	RAB1A	97	100.000	Panthera_tigris_altaica
ENSPTRG00000011989	RAB1A	100	100.000	ENSPANG00000010485	RAB1A	100	100.000	Papio_anubis
ENSPTRG00000011989	RAB1A	98	98.990	ENSPSIG00000008028	RAB1A	97	98.990	Pelodiscus_sinensis
ENSPTRG00000011989	RAB1A	99	95.588	ENSPMGG00000021015	-	99	95.588	Periophthalmus_magnuspinnatus
ENSPTRG00000011989	RAB1A	100	100.000	ENSPEMG00000009340	Rab1a	100	100.000	Peromyscus_maniculatus_bairdii
ENSPTRG00000011989	RAB1A	100	99.512	ENSPCIG00000023212	RAB1A	100	99.512	Phascolarctos_cinereus
ENSPTRG00000011989	RAB1A	99	93.137	ENSPFOG00000000498	-	99	93.137	Poecilia_formosa
ENSPTRG00000011989	RAB1A	99	94.059	ENSPLAG00000015592	-	100	94.059	Poecilia_latipinna
ENSPTRG00000011989	RAB1A	99	94.059	ENSPMEG00000005288	-	100	94.059	Poecilia_mexicana
ENSPTRG00000011989	RAB1A	100	100.000	ENSPPYG00000012360	RAB1A	100	100.000	Pongo_abelii
ENSPTRG00000011989	RAB1A	100	100.000	ENSPCOG00000017244	RAB1A	100	100.000	Propithecus_coquereli
ENSPTRG00000011989	RAB1A	99	96.040	ENSPNYG00000015841	-	100	96.040	Pundamilia_nyererei
ENSPTRG00000011989	RAB1A	100	100.000	ENSRNOG00000004992	Rab1a	100	100.000	Rattus_norvegicus
ENSPTRG00000011989	RAB1A	100	100.000	ENSSBOG00000023732	RAB1A	100	100.000	Saimiri_boliviensis_boliviensis
ENSPTRG00000011989	RAB1A	99	98.500	ENSSHAG00000003597	RAB1A	98	98.010	Sarcophilus_harrisii
ENSPTRG00000011989	RAB1A	99	95.545	ENSSMAG00000021049	-	100	95.545	Scophthalmus_maximus
ENSPTRG00000011989	RAB1A	99	96.040	ENSSDUG00000022535	RAB1A	100	96.040	Seriola_dumerili
ENSPTRG00000011989	RAB1A	100	99.512	ENSSPUG00000012822	RAB1A	100	99.512	Sphenodon_punctatus
ENSPTRG00000011989	RAB1A	99	95.545	ENSSPAG00000012564	-	100	95.545	Stegastes_partitus
ENSPTRG00000011989	RAB1A	100	100.000	ENSSSCG00000008359	RAB1A	100	100.000	Sus_scrofa
ENSPTRG00000011989	RAB1A	98	99.492	ENSTGUG00000002328	RAB1A	100	97.073	Taeniopygia_guttata
ENSPTRG00000011989	RAB1A	99	95.050	ENSTRUG00000024994	RAB1A	100	95.050	Takifugu_rubripes
ENSPTRG00000011989	RAB1A	99	99.497	ENSUMAG00000021038	RAB1A	99	100.000	Ursus_maritimus
ENSPTRG00000011989	RAB1A	98	100.000	ENSVPAG00000005640	RAB1A	99	99.495	Vicugna_pacos
ENSPTRG00000011989	RAB1A	100	100.000	ENSVVUG00000027588	RAB1A	100	100.000	Vulpes_vulpes
ENSPTRG00000011989	RAB1A	99	94.554	ENSXMAG00000015776	-	100	94.554	Xiphophorus_maculatus