EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000012025 (Gene tree)
Gene ID: 459300
Gene Symbol: PCBP1
Alias: -
Full Name: poly(rC) binding protein 1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 1071 bases
Position: chr2A:71512586-71513656
Accession: 373
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000020647	KH_1	PF00013.29	2.6e-51	1	3
ENSPTRP00000020647	KH_1	PF00013.29	2.6e-51	2	3
ENSPTRP00000020647	KH_1	PF00013.29	2.6e-51	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000022376	-	1071	XM_515530	ENSPTRP00000020647	356 (aa)	XP_515530	H2QI21

Gene Model

Click here to download ENSPTRG00000012025's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03040	Spliceosome	KEGG
ptr04216	Ferroptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000012025's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000012025	PCBP1	59	31.466	ENSPTRG00000044650	-	87	30.830
ENSPTRG00000012025	PCBP1	69	34.667	ENSPTRG00000010364	KHSRP	58	34.667
ENSPTRG00000012025	PCBP1	100	82.834	ENSPTRG00000005018	PCBP2	100	82.834
ENSPTRG00000012025	PCBP1	56	32.143	ENSPTRG00000015705	IGF2BP2	81	33.696
ENSPTRG00000012025	PCBP1	70	40.541	ENSPTRG00000006229	NOVA1	57	40.541
ENSPTRG00000012025	PCBP1	66	41.558	ENSPTRG00000011173	NOVA2	51	41.558
ENSPTRG00000012025	PCBP1	82	38.776	ENSPTRG00000021061	-	71	38.776
ENSPTRG00000012025	PCBP1	98	52.691	ENSPTRG00000014983	PCBP4	82	50.142
ENSPTRG00000012025	PCBP1	65	38.028	ENSPTRG00000021474	FUBP3	75	30.830
ENSPTRG00000012025	PCBP1	99	48.767	ENSPTRG00000014010	PCBP3	99	48.767

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000012025	PCBP1	100	100.000	ENSG00000169564	PCBP1	100	100.000	Homo_sapiens
ENSPTRG00000012025	PCBP1	100	97.191	ENSAMEG00000016094	PCBP1	100	97.191	Ailuropoda_melanoleuca
ENSPTRG00000012025	PCBP1	79	91.873	ENSANAG00000022494	-	100	91.873	Aotus_nancymaae
ENSPTRG00000012025	PCBP1	79	95.053	ENSANAG00000019364	-	100	95.053	Aotus_nancymaae
ENSPTRG00000012025	PCBP1	100	85.674	ENSANAG00000033377	-	100	85.674	Aotus_nancymaae
ENSPTRG00000012025	PCBP1	97	96.243	ENSANAG00000026989	-	99	96.243	Aotus_nancymaae
ENSPTRG00000012025	PCBP1	79	95.053	ENSANAG00000031745	-	100	95.053	Aotus_nancymaae
ENSPTRG00000012025	PCBP1	100	88.202	ENSANAG00000026077	-	100	88.202	Aotus_nancymaae
ENSPTRG00000012025	PCBP1	100	89.045	ENSANAG00000023938	-	100	89.045	Aotus_nancymaae
ENSPTRG00000012025	PCBP1	89	87.658	ENSANAG00000027108	-	100	87.658	Aotus_nancymaae
ENSPTRG00000012025	PCBP1	91	100.000	ENSBTAG00000008985	PCBP1	99	100.000	Bos_taurus
ENSPTRG00000012025	PCBP1	100	94.382	ENSCJAG00000038388	-	95	94.382	Callithrix_jacchus
ENSPTRG00000012025	PCBP1	100	99.719	ENSCAFG00000003326	PCBP1	100	99.719	Canis_familiaris
ENSPTRG00000012025	PCBP1	100	100.000	ENSCHIG00000007923	PCBP1	100	100.000	Capra_hircus
ENSPTRG00000012025	PCBP1	100	99.438	ENSTSYG00000027848	PCBP1	100	99.438	Carlito_syrichta
ENSPTRG00000012025	PCBP1	100	100.000	ENSCPOG00000013511	PCBP1	100	100.000	Cavia_porcellus
ENSPTRG00000012025	PCBP1	100	100.000	ENSCCAG00000019842	-	100	100.000	Cebus_capucinus
ENSPTRG00000012025	PCBP1	100	91.292	ENSCCAG00000029186	-	98	91.292	Cebus_capucinus
ENSPTRG00000012025	PCBP1	100	100.000	ENSCATG00000015029	PCBP1	100	100.000	Cercocebus_atys
ENSPTRG00000012025	PCBP1	100	99.438	ENSCLAG00000017909	PCBP1	100	99.438	Chinchilla_lanigera
ENSPTRG00000012025	PCBP1	100	100.000	ENSCSAG00000019441	PCBP1	100	100.000	Chlorocebus_sabaeus
ENSPTRG00000012025	PCBP1	100	100.000	ENSCANG00000018039	-	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000012025	PCBP1	100	89.888	ENSCANG00000032470	-	94	89.888	Colobus_angolensis_palliatus
ENSPTRG00000012025	PCBP1	72	84.706	ENSCANG00000033810	-	87	84.706	Colobus_angolensis_palliatus
ENSPTRG00000012025	PCBP1	100	100.000	ENSCGRG00001015078	Pcbp1	100	100.000	Cricetulus_griseus_chok1gshd
ENSPTRG00000012025	PCBP1	100	100.000	ENSCGRG00000018899	Pcbp1	100	100.000	Cricetulus_griseus_crigri
ENSPTRG00000012025	PCBP1	80	99.298	ENSDNOG00000036372	PCBP1	99	99.298	Dasypus_novemcinctus
ENSPTRG00000012025	PCBP1	100	100.000	ENSDORG00000008216	Pcbp1	100	100.000	Dipodomys_ordii
ENSPTRG00000012025	PCBP1	100	100.000	ENSFCAG00000022238	PCBP1	100	100.000	Felis_catus
ENSPTRG00000012025	PCBP1	100	99.719	ENSFDAG00000019637	PCBP1	100	99.719	Fukomys_damarensis
ENSPTRG00000012025	PCBP1	100	100.000	ENSGGOG00000028130	PCBP1	100	100.000	Gorilla_gorilla
ENSPTRG00000012025	PCBP1	100	97.753	ENSHGLG00000020243	-	100	97.753	Heterocephalus_glaber_female
ENSPTRG00000012025	PCBP1	100	99.719	ENSHGLG00000020345	Pcbp1	100	99.719	Heterocephalus_glaber_female
ENSPTRG00000012025	PCBP1	100	99.719	ENSHGLG00100019761	Pcbp1	100	99.719	Heterocephalus_glaber_male
ENSPTRG00000012025	PCBP1	100	99.438	ENSHGLG00100019620	-	100	99.438	Heterocephalus_glaber_male
ENSPTRG00000012025	PCBP1	100	100.000	ENSSTOG00000026002	PCBP1	100	100.000	Ictidomys_tridecemlineatus
ENSPTRG00000012025	PCBP1	100	100.000	ENSJJAG00000000737	Pcbp1	100	100.000	Jaculus_jaculus
ENSPTRG00000012025	PCBP1	95	88.427	ENSMFAG00000003400	PCBP1	100	88.427	Macaca_fascicularis
ENSPTRG00000012025	PCBP1	100	100.000	ENSMMUG00000038295	PCBP1	100	100.000	Macaca_mulatta
ENSPTRG00000012025	PCBP1	100	100.000	ENSMNEG00000002934	PCBP1	100	100.000	Macaca_nemestrina
ENSPTRG00000012025	PCBP1	100	100.000	ENSMLEG00000027389	PCBP1	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000012025	PCBP1	100	99.719	ENSMAUG00000009843	Pcbp1	100	99.719	Mesocricetus_auratus
ENSPTRG00000012025	PCBP1	100	100.000	ENSMICG00000038221	PCBP1	100	100.000	Microcebus_murinus
ENSPTRG00000012025	PCBP1	100	100.000	ENSMOCG00000008102	Pcbp1	100	100.000	Microtus_ochrogaster
ENSPTRG00000012025	PCBP1	100	100.000	MGP_CAROLIEiJ_G0028598	Pcbp1	100	100.000	Mus_caroli
ENSPTRG00000012025	PCBP1	100	100.000	ENSMUSG00000051695	Pcbp1	100	100.000	Mus_musculus
ENSPTRG00000012025	PCBP1	100	100.000	MGP_PahariEiJ_G0022335	Pcbp1	100	100.000	Mus_pahari
ENSPTRG00000012025	PCBP1	100	100.000	MGP_SPRETEiJ_G0029609	Pcbp1	100	100.000	Mus_spretus
ENSPTRG00000012025	PCBP1	100	97.191	ENSMPUG00000007175	PCBP1	100	97.191	Mustela_putorius_furo
ENSPTRG00000012025	PCBP1	100	100.000	ENSMLUG00000014173	PCBP1	100	100.000	Myotis_lucifugus
ENSPTRG00000012025	PCBP1	100	100.000	ENSNGAG00000011957	-	100	100.000	Nannospalax_galili
ENSPTRG00000012025	PCBP1	100	100.000	ENSNGAG00000014909	-	100	100.000	Nannospalax_galili
ENSPTRG00000012025	PCBP1	100	100.000	ENSNLEG00000018722	PCBP1	100	100.000	Nomascus_leucogenys
ENSPTRG00000012025	PCBP1	100	83.427	ENSODEG00000000263	PCBP1	100	83.427	Octodon_degus
ENSPTRG00000012025	PCBP1	100	100.000	ENSOCUG00000003634	PCBP1	100	100.000	Oryctolagus_cuniculus
ENSPTRG00000012025	PCBP1	100	97.191	ENSOGAG00000028946	PCBP1	100	97.191	Otolemur_garnettii
ENSPTRG00000012025	PCBP1	100	100.000	ENSOARG00000019516	PCBP1	100	100.000	Ovis_aries
ENSPTRG00000012025	PCBP1	100	98.034	ENSPPAG00000036116	PCBP1	99	98.599	Pan_paniscus
ENSPTRG00000012025	PCBP1	100	100.000	ENSPPRG00000020533	PCBP1	100	100.000	Panthera_pardus
ENSPTRG00000012025	PCBP1	100	100.000	ENSPTIG00000007318	PCBP1	100	100.000	Panthera_tigris_altaica
ENSPTRG00000012025	PCBP1	100	100.000	ENSPANG00000011314	PCBP1	100	100.000	Papio_anubis
ENSPTRG00000012025	PCBP1	100	100.000	ENSPPYG00000012328	PCBP1	100	100.000	Pongo_abelii
ENSPTRG00000012025	PCBP1	100	100.000	ENSPCOG00000026934	PCBP1	100	100.000	Propithecus_coquereli
ENSPTRG00000012025	PCBP1	100	99.157	ENSRROG00000009684	-	95	99.157	Rhinopithecus_roxellana
ENSPTRG00000012025	PCBP1	93	98.795	ENSRROG00000012514	-	100	98.795	Rhinopithecus_roxellana
ENSPTRG00000012025	PCBP1	100	83.427	ENSSBOG00000035309	-	94	83.427	Saimiri_boliviensis_boliviensis
ENSPTRG00000012025	PCBP1	100	99.719	ENSSSCG00000027224	PCBP1	100	99.719	Sus_scrofa
ENSPTRG00000012025	PCBP1	51	100.000	ENSTBEG00000015706	-	51	100.000	Tupaia_belangeri
ENSPTRG00000012025	PCBP1	91	99.690	ENSVVUG00000028033	PCBP1	99	99.690	Vulpes_vulpes