EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000013176 (Gene tree)
Gene ID: 470014
Gene Symbol: SNRPB
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptides B and B1
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 9334 bases
Position: chr20:2322220-2331553
Accession: 9994
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000059297	LSM	PF01423.22	1.2e-19	1	1
ENSPTRP00000063658	LSM	PF01423.22	2.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000067711	-	1153	XM_009436637	ENSPTRP00000059297	231 (aa)	XP_009434912	H2RDT2
ENSPTRT00000084121	-	870	-	ENSPTRP00000063658	289 (aa)	-	A0A2I3RH05

Gene Model

Click here to download ENSPTRG00000013176's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptr03040	Spliceosome	KEGG
ptr05322	Systemic lupus erythematosus	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000013176's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000013176	SNRPB	99	92.140	ENSPTRG00000006826	SNRPN	92	92.760
ENSPTRG00000013176	SNRPB	96	68.919	ENSPTRG00000052400	-	65	77.622

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000013176	SNRPB	100	100.000	ENSG00000125835	SNRPB	100	100.000	Homo_sapiens
ENSPTRG00000013176	SNRPB	78	92.818	ENSAPOG00000019606	snrpb	56	94.643	Acanthochromis_polyacanthus
ENSPTRG00000013176	SNRPB	99	100.000	ENSAMEG00000011353	SNRPB	94	100.000	Ailuropoda_melanoleuca
ENSPTRG00000013176	SNRPB	76	92.571	ENSACIG00000014480	snrpb	71	94.444	Amphilophus_citrinellus
ENSPTRG00000013176	SNRPB	78	92.818	ENSAOCG00000006876	snrpb	69	94.643	Amphiprion_ocellaris
ENSPTRG00000013176	SNRPB	78	92.818	ENSAPEG00000021585	snrpb	71	94.643	Amphiprion_percula
ENSPTRG00000013176	SNRPB	78	92.265	ENSATEG00000009836	snrpb	69	94.048	Anabas_testudineus
ENSPTRG00000013176	SNRPB	92	95.305	ENSACAG00000002053	SNRPB	92	95.305	Anolis_carolinensis
ENSPTRG00000013176	SNRPB	100	100.000	ENSANAG00000024443	-	100	100.000	Aotus_nancymaae
ENSPTRG00000013176	SNRPB	99	93.043	ENSANAG00000036271	-	76	93.122	Aotus_nancymaae
ENSPTRG00000013176	SNRPB	78	92.818	ENSACLG00000014707	snrpb	69	94.643	Astatotilapia_calliptera
ENSPTRG00000013176	SNRPB	73	92.857	ENSAMXG00000029434	snrpb	70	94.048	Astyanax_mexicanus
ENSPTRG00000013176	SNRPB	100	99.567	ENSBTAG00000001038	SNRPB	100	99.567	Bos_taurus
ENSPTRG00000013176	SNRPB	93	92.056	ENSCJAG00000023097	-	79	92.063	Callithrix_jacchus
ENSPTRG00000013176	SNRPB	100	100.000	ENSCJAG00000020971	-	100	100.000	Callithrix_jacchus
ENSPTRG00000013176	SNRPB	100	100.000	ENSCAFG00000006693	-	100	100.000	Canis_familiaris
ENSPTRG00000013176	SNRPB	81	88.421	ENSCAFG00000031109	-	79	84.737	Canis_familiaris
ENSPTRG00000013176	SNRPB	99	100.000	ENSCAFG00020016981	-	95	100.000	Canis_lupus_dingo
ENSPTRG00000013176	SNRPB	100	99.567	ENSCHIG00000025449	-	100	99.567	Capra_hircus
ENSPTRG00000013176	SNRPB	97	76.889	ENSTSYG00000032303	-	85	55.022	Carlito_syrichta
ENSPTRG00000013176	SNRPB	100	100.000	ENSTSYG00000014498	-	100	100.000	Carlito_syrichta
ENSPTRG00000013176	SNRPB	99	100.000	ENSCAPG00000012669	SNRPB	100	100.000	Cavia_aperea
ENSPTRG00000013176	SNRPB	100	100.000	ENSCPOG00000039408	SNRPB	100	100.000	Cavia_porcellus
ENSPTRG00000013176	SNRPB	100	100.000	ENSCCAG00000026002	SNRPB	100	100.000	Cebus_capucinus
ENSPTRG00000013176	SNRPB	55	88.189	ENSCCAG00000035140	-	89	86.275	Cebus_capucinus
ENSPTRG00000013176	SNRPB	100	100.000	ENSCATG00000030230	SNRPB	100	100.000	Cercocebus_atys
ENSPTRG00000013176	SNRPB	98	100.000	ENSCLAG00000012442	SNRPB	95	100.000	Chinchilla_lanigera
ENSPTRG00000013176	SNRPB	100	100.000	ENSCSAG00000010840	SNRPB	100	100.000	Chlorocebus_sabaeus
ENSPTRG00000013176	SNRPB	99	96.507	ENSCPBG00000026801	SNRPB	99	96.507	Chrysemys_picta_bellii
ENSPTRG00000013176	SNRPB	100	100.000	ENSCANG00000019461	SNRPB	100	100.000	Colobus_angolensis_palliatus
ENSPTRG00000013176	SNRPB	100	100.000	ENSCGRG00001023046	Snrpb	100	100.000	Cricetulus_griseus_chok1gshd
ENSPTRG00000013176	SNRPB	96	100.000	ENSCGRG00000010423	Snrpb	98	100.000	Cricetulus_griseus_crigri
ENSPTRG00000013176	SNRPB	79	92.896	ENSCSEG00000020328	snrpb	70	94.643	Cynoglossus_semilaevis
ENSPTRG00000013176	SNRPB	73	92.857	ENSDARG00000011125	snrpb	69	94.643	Danio_rerio
ENSPTRG00000013176	SNRPB	75	94.220	ENSDNOG00000007896	-	71	94.220	Dasypus_novemcinctus
ENSPTRG00000013176	SNRPB	99	100.000	ENSDNOG00000015545	-	95	100.000	Dasypus_novemcinctus
ENSPTRG00000013176	SNRPB	97	99.552	ENSDORG00000029558	Snrpb	97	99.552	Dipodomys_ordii
ENSPTRG00000013176	SNRPB	65	70.470	FBgn0262601	SmB	74	70.470	Drosophila_melanogaster
ENSPTRG00000013176	SNRPB	79	78.689	ENSETEG00000006830	SNRPB	74	77.381	Echinops_telfairi
ENSPTRG00000013176	SNRPB	78	80.108	ENSEBUG00000007467	SNRPB	62	88.591	Eptatretus_burgeri
ENSPTRG00000013176	SNRPB	100	99.567	ENSEASG00005012991	SNRPB	100	99.567	Equus_asinus_asinus
ENSPTRG00000013176	SNRPB	100	100.000	ENSECAG00000011944	SNRPB	100	100.000	Equus_caballus
ENSPTRG00000013176	SNRPB	98	100.000	ENSEEUG00000015568	SNRPB	80	100.000	Erinaceus_europaeus
ENSPTRG00000013176	SNRPB	63	95.862	ENSELUG00000014564	snrpb	71	93.210	Esox_lucius
ENSPTRG00000013176	SNRPB	100	100.000	ENSFCAG00000034090	-	100	100.000	Felis_catus
ENSPTRG00000013176	SNRPB	74	95.930	ENSFALG00000004866	SNRPB	92	95.775	Ficedula_albicollis
ENSPTRG00000013176	SNRPB	100	100.000	ENSFDAG00000009937	SNRPB	100	100.000	Fukomys_damarensis
ENSPTRG00000013176	SNRPB	99	96.070	ENSGALG00000035421	SNRPN	95	96.070	Gallus_gallus
ENSPTRG00000013176	SNRPB	74	93.023	ENSGAFG00000019558	snrpb	72	94.012	Gambusia_affinis
ENSPTRG00000013176	SNRPB	79	91.257	ENSGACG00000003262	snrpb	70	94.643	Gasterosteus_aculeatus
ENSPTRG00000013176	SNRPB	99	96.507	ENSGAGG00000001308	SNRPB	95	96.507	Gopherus_agassizii
ENSPTRG00000013176	SNRPB	100	100.000	ENSGGOG00000016138	SNRPB	100	100.000	Gorilla_gorilla
ENSPTRG00000013176	SNRPB	78	92.818	ENSHBUG00000008369	snrpb	69	94.643	Haplochromis_burtoni
ENSPTRG00000013176	SNRPB	100	100.000	ENSHGLG00000016241	-	100	100.000	Heterocephalus_glaber_female
ENSPTRG00000013176	SNRPB	65	90.000	ENSHGLG00000016505	-	72	90.000	Heterocephalus_glaber_female
ENSPTRG00000013176	SNRPB	65	90.000	ENSHGLG00100004178	-	72	90.000	Heterocephalus_glaber_male
ENSPTRG00000013176	SNRPB	100	100.000	ENSHGLG00100012877	-	100	100.000	Heterocephalus_glaber_male
ENSPTRG00000013176	SNRPB	79	92.350	ENSHCOG00000014888	snrpb	70	94.643	Hippocampus_comes
ENSPTRG00000013176	SNRPB	73	92.857	ENSIPUG00000024569	SNRPB	70	94.643	Ictalurus_punctatus
ENSPTRG00000013176	SNRPB	94	81.944	ENSSTOG00000027821	-	62	99.265	Ictidomys_tridecemlineatus
ENSPTRG00000013176	SNRPB	99	98.253	ENSSTOG00000033664	-	95	98.253	Ictidomys_tridecemlineatus
ENSPTRG00000013176	SNRPB	100	100.000	ENSJJAG00000024170	Snrpb	100	100.000	Jaculus_jaculus
ENSPTRG00000013176	SNRPB	75	94.220	ENSKMAG00000014494	snrpb	68	95.238	Kryptolebias_marmoratus
ENSPTRG00000013176	SNRPB	79	92.350	ENSLBEG00000005678	snrpb	70	94.643	Labrus_bergylta
ENSPTRG00000013176	SNRPB	96	93.213	ENSLACG00000011459	SNRPB	92	93.213	Latimeria_chalumnae
ENSPTRG00000013176	SNRPB	73	94.048	ENSLOCG00000002687	snrpb	70	95.238	Lepisosteus_oculatus
ENSPTRG00000013176	SNRPB	99	96.053	ENSLAFG00000017588	SNRPB	99	96.053	Loxodonta_africana
ENSPTRG00000013176	SNRPB	100	100.000	ENSMFAG00000038756	SNRPB	100	100.000	Macaca_fascicularis
ENSPTRG00000013176	SNRPB	100	100.000	ENSMMUG00000010050	SNRPB	100	100.000	Macaca_mulatta
ENSPTRG00000013176	SNRPB	100	100.000	ENSMNEG00000027954	SNRPB	100	100.000	Macaca_nemestrina
ENSPTRG00000013176	SNRPB	100	100.000	ENSMLEG00000022346	SNRPB	100	100.000	Mandrillus_leucophaeus
ENSPTRG00000013176	SNRPB	78	92.778	ENSMAMG00000009294	snrpb	67	94.611	Mastacembelus_armatus
ENSPTRG00000013176	SNRPB	78	92.818	ENSMZEG00005011856	snrpb	69	94.643	Maylandia_zebra
ENSPTRG00000013176	SNRPB	97	85.333	ENSMICG00000015983	-	87	89.947	Microcebus_murinus
ENSPTRG00000013176	SNRPB	100	99.567	ENSMICG00000016519	SNRPB	100	99.567	Microcebus_murinus
ENSPTRG00000013176	SNRPB	100	99.567	ENSMOCG00000002892	-	100	99.567	Microtus_ochrogaster
ENSPTRG00000013176	SNRPB	72	70.060	ENSMOCG00000021362	-	72	73.410	Microtus_ochrogaster
ENSPTRG00000013176	SNRPB	79	92.857	ENSMMOG00000013226	snrpb	71	94.611	Mola_mola
ENSPTRG00000013176	SNRPB	78	92.265	ENSMALG00000020839	snrpb	56	94.048	Monopterus_albus
ENSPTRG00000013176	SNRPB	100	99.567	MGP_CAROLIEiJ_G0024293	Snrpb	100	99.567	Mus_caroli
ENSPTRG00000013176	SNRPB	100	99.567	ENSMUSG00000027404	Snrpb	100	99.567	Mus_musculus
ENSPTRG00000013176	SNRPB	100	99.567	MGP_PahariEiJ_G0025738	Snrpb	100	99.567	Mus_pahari
ENSPTRG00000013176	SNRPB	100	99.567	MGP_SPRETEiJ_G0025213	Snrpb	100	99.567	Mus_spretus
ENSPTRG00000013176	SNRPB	100	100.000	ENSMPUG00000009283	SNRPB	100	100.000	Mustela_putorius_furo
ENSPTRG00000013176	SNRPB	99	96.943	ENSMLUG00000016951	SNRPB	95	96.943	Myotis_lucifugus
ENSPTRG00000013176	SNRPB	100	100.000	ENSNGAG00000012051	Snrpb	100	100.000	Nannospalax_galili
ENSPTRG00000013176	SNRPB	78	90.055	ENSNBRG00000006353	snrpb	62	93.293	Neolamprologus_brichardi
ENSPTRG00000013176	SNRPB	99	100.000	ENSNLEG00000029067	SNRPB	96	100.000	Nomascus_leucogenys
ENSPTRG00000013176	SNRPB	97	97.333	ENSMEUG00000015625	SNRPB	100	97.333	Notamacropus_eugenii
ENSPTRG00000013176	SNRPB	98	96.460	ENSODEG00000016060	-	95	96.460	Octodon_degus
ENSPTRG00000013176	SNRPB	100	100.000	ENSODEG00000004305	-	100	100.000	Octodon_degus
ENSPTRG00000013176	SNRPB	78	92.818	ENSONIG00000000248	snrpb	69	94.643	Oreochromis_niloticus
ENSPTRG00000013176	SNRPB	92	71.831	ENSOCUG00000026813	-	63	70.946	Oryctolagus_cuniculus
ENSPTRG00000013176	SNRPB	99	96.943	ENSOCUG00000028215	-	95	96.943	Oryctolagus_cuniculus
ENSPTRG00000013176	SNRPB	93	94.884	ENSOCUG00000021456	-	78	95.767	Oryctolagus_cuniculus
ENSPTRG00000013176	SNRPB	77	93.296	ENSOCUG00000022423	-	86	96.429	Oryctolagus_cuniculus
ENSPTRG00000013176	SNRPB	99	99.563	ENSOCUG00000014042	-	95	99.563	Oryctolagus_cuniculus
ENSPTRG00000013176	SNRPB	78	92.265	ENSORLG00000021862	snrpb	69	94.643	Oryzias_latipes
ENSPTRG00000013176	SNRPB	99	100.000	ENSOGAG00000016149	SNRPB	95	100.000	Otolemur_garnettii
ENSPTRG00000013176	SNRPB	100	99.567	ENSOARG00000006740	SNRPB	100	99.567	Ovis_aries
ENSPTRG00000013176	SNRPB	100	100.000	ENSPPAG00000036314	SNRPB	100	100.000	Pan_paniscus
ENSPTRG00000013176	SNRPB	100	100.000	ENSPPRG00000003233	-	100	100.000	Panthera_pardus
ENSPTRG00000013176	SNRPB	99	100.000	ENSPTIG00000007468	SNRPB	99	100.000	Panthera_tigris_altaica
ENSPTRG00000013176	SNRPB	99	100.000	ENSPANG00000020362	SNRPB	95	100.000	Papio_anubis
ENSPTRG00000013176	SNRPB	73	92.262	ENSPKIG00000002865	snrpb	70	94.048	Paramormyrops_kingsleyae
ENSPTRG00000013176	SNRPB	99	96.491	ENSPSIG00000014125	SNRPB	94	96.491	Pelodiscus_sinensis
ENSPTRG00000013176	SNRPB	77	90.449	ENSPMGG00000016349	snrpb	69	92.025	Periophthalmus_magnuspinnatus
ENSPTRG00000013176	SNRPB	100	100.000	ENSPEMG00000007948	Snrpb	100	100.000	Peromyscus_maniculatus_bairdii
ENSPTRG00000013176	SNRPB	99	97.807	ENSPCIG00000004694	SNRPB	95	97.807	Phascolarctos_cinereus
ENSPTRG00000013176	SNRPB	82	76.842	ENSPREG00000015515	snrpb	62	95.556	Poecilia_reticulata
ENSPTRG00000013176	SNRPB	100	100.000	ENSPPYG00000010841	SNRPB	100	100.000	Pongo_abelii
ENSPTRG00000013176	SNRPB	100	100.000	ENSPCOG00000013686	SNRPB	100	100.000	Propithecus_coquereli
ENSPTRG00000013176	SNRPB	98	98.678	ENSPVAG00000017013	SNRPB	80	98.678	Pteropus_vampyrus
ENSPTRG00000013176	SNRPB	78	92.818	ENSPNYG00000014788	snrpb	69	94.643	Pundamilia_nyererei
ENSPTRG00000013176	SNRPB	77	93.220	ENSPNAG00000016126	snrpb	70	94.643	Pygocentrus_nattereri
ENSPTRG00000013176	SNRPB	100	100.000	ENSRNOG00000006961	Snrpb	100	100.000	Rattus_norvegicus
ENSPTRG00000013176	SNRPB	100	99.567	ENSRBIG00000040505	SNRPB	100	99.567	Rhinopithecus_bieti
ENSPTRG00000013176	SNRPB	100	100.000	ENSRROG00000036094	SNRPB	100	100.000	Rhinopithecus_roxellana
ENSPTRG00000013176	SNRPB	100	100.000	ENSSBOG00000027310	SNRPB	100	100.000	Saimiri_boliviensis_boliviensis
ENSPTRG00000013176	SNRPB	99	98.253	ENSSHAG00000010394	SNRPB	95	98.253	Sarcophilus_harrisii
ENSPTRG00000013176	SNRPB	73	92.262	ENSSFOG00015002870	snrpb	70	93.452	Scleropages_formosus
ENSPTRG00000013176	SNRPB	79	91.803	ENSSMAG00000006766	snrpb	70	94.048	Scophthalmus_maximus
ENSPTRG00000013176	SNRPB	78	92.818	ENSSDUG00000018539	snrpb	69	94.643	Seriola_dumerili
ENSPTRG00000013176	SNRPB	78	92.818	ENSSLDG00000022391	snrpb	69	94.643	Seriola_lalandi_dorsalis
ENSPTRG00000013176	SNRPB	74	84.884	ENSSARG00000003084	SNRPB	74	84.884	Sorex_araneus
ENSPTRG00000013176	SNRPB	99	96.491	ENSSPUG00000015659	SNRPB	95	96.491	Sphenodon_punctatus
ENSPTRG00000013176	SNRPB	78	92.818	ENSSPAG00000021992	snrpb	69	94.643	Stegastes_partitus
ENSPTRG00000013176	SNRPB	100	99.567	ENSSSCG00000040857	-	100	99.567	Sus_scrofa
ENSPTRG00000013176	SNRPB	100	80.087	ENSSSCG00000011966	-	91	75.943	Sus_scrofa
ENSPTRG00000013176	SNRPB	77	79.661	ENSTGUG00000005684	SNRPB	59	96.429	Taeniopygia_guttata
ENSPTRG00000013176	SNRPB	79	91.803	ENSTRUG00000023094	snrpb	72	94.048	Takifugu_rubripes
ENSPTRG00000013176	SNRPB	79	91.803	ENSTNIG00000002991	snrpb	70	94.048	Tetraodon_nigroviridis
ENSPTRG00000013176	SNRPB	75	100.000	ENSUAMG00000005984	-	83	100.000	Ursus_americanus
ENSPTRG00000013176	SNRPB	59	99.270	ENSUMAG00000002123	-	64	99.275	Ursus_maritimus
ENSPTRG00000013176	SNRPB	97	79.736	ENSVVUG00000010086	-	85	81.122	Vulpes_vulpes
ENSPTRG00000013176	SNRPB	64	43.713	ENSVVUG00000018297	-	52	43.713	Vulpes_vulpes
ENSPTRG00000013176	SNRPB	99	99.563	ENSVVUG00000025654	-	95	99.563	Vulpes_vulpes
ENSPTRG00000013176	SNRPB	82	95.767	ENSXETG00000027266	snrpb	72	95.294	Xenopus_tropicalis
ENSPTRG00000013176	SNRPB	74	78.947	ENSXMAG00000028767	snrpb	58	95.556	Xiphophorus_maculatus