EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000013446 (Gene tree)
Gene ID: -
Gene Symbol: RBM12
Alias: -
Full Name: RNA binding motif protein 12
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 38902 bases
Position: chrKV421324.1:19088-57989
Accession: 6254
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000066364	RRM_1	PF00076.22	2.3e-30	1	3
ENSPTRP00000066364	RRM_1	PF00076.22	2.3e-30	2	3
ENSPTRP00000066364	RRM_1	PF00076.22	2.3e-30	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000098359	-	1812	XM_016947102	ENSPTRP00000070238	537 (aa)	XP_016802591	K7AA11
ENSPTRT00000102966	-	4089	XM_016947098	ENSPTRP00000066364	954 (aa)	XP_016802587	H2QK97
ENSPTRT00000107794	-	1686	-	ENSPTRP00000071160	561 (aa)	-	A0A2I3S2E4
ENSPTRT00000103478	-	1782	-	ENSPTRP00000066874	593 (aa)	-	A0A2I3RQB4
ENSPTRT00000088808	-	4706	-	ENSPTRP00000069783	396 (aa)	-	A0A2I3RYI9
ENSPTRT00000079818	-	1722	-	ENSPTRP00000071853	573 (aa)	-	A0A2I3TTE2

Gene Model

Click here to download ENSPTRG00000013446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000013446's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000013446	RBM12	54	72.414	ENSPTRG00000020420	RBM12B	57	72.414
ENSPTRG00000013446	RBM12	100	100.000	ENSPTRG00000040708	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000013446	RBM12	98	100.000	ENSG00000244462	RBM12	100	100.000	Homo_sapiens
ENSPTRG00000013446	RBM12	98	95.815	ENSAMEG00000019189	RBM12	100	95.815	Ailuropoda_melanoleuca
ENSPTRG00000013446	RBM12	99	78.504	ENSACAG00000006330	RBM12	99	78.504	Anolis_carolinensis
ENSPTRG00000013446	RBM12	100	98.428	ENSANAG00000032596	RBM12	100	98.428	Aotus_nancymaae
ENSPTRG00000013446	RBM12	98	92.059	ENSBTAG00000044015	RBM12	100	91.432	Bos_taurus
ENSPTRG00000013446	RBM12	100	95.073	ENSCAFG00000008256	RBM12	100	94.340	Canis_familiaris
ENSPTRG00000013446	RBM12	98	94.421	ENSCAFG00020005650	RBM12	100	94.206	Canis_lupus_dingo
ENSPTRG00000013446	RBM12	98	94.313	ENSCHIG00000024592	RBM12	100	93.562	Capra_hircus
ENSPTRG00000013446	RBM12	100	94.654	ENSTSYG00000030563	RBM12	100	94.759	Carlito_syrichta
ENSPTRG00000013446	RBM12	82	87.116	ENSCAPG00000006176	RBM12	80	93.866	Cavia_aperea
ENSPTRG00000013446	RBM12	98	87.888	ENSCPOG00000035170	RBM12	100	93.909	Cavia_porcellus
ENSPTRG00000013446	RBM12	94	94.731	ENSCCAG00000036056	-	98	94.731	Cebus_capucinus
ENSPTRG00000013446	RBM12	91	89.418	ENSCCAG00000035899	-	100	76.288	Cebus_capucinus
ENSPTRG00000013446	RBM12	100	99.476	ENSCATG00000030934	RBM12	100	99.476	Cercocebus_atys
ENSPTRG00000013446	RBM12	98	93.240	ENSCLAG00000017230	RBM12	100	93.240	Chinchilla_lanigera
ENSPTRG00000013446	RBM12	100	99.371	ENSCANG00000030552	RBM12	100	99.371	Colobus_angolensis_palliatus
ENSPTRG00000013446	RBM12	98	81.100	ENSCGRG00001021144	Rbm12	100	86.231	Cricetulus_griseus_chok1gshd
ENSPTRG00000013446	RBM12	98	81.100	ENSCGRG00000012719	Rbm12	100	86.231	Cricetulus_griseus_crigri
ENSPTRG00000013446	RBM12	73	86.591	ENSDORG00000000606	-	100	81.571	Dipodomys_ordii
ENSPTRG00000013446	RBM12	98	93.910	ENSDORG00000028509	-	100	93.269	Dipodomys_ordii
ENSPTRG00000013446	RBM12	52	85.870	ENSEBUG00000016806	rbm12	89	65.649	Eptatretus_burgeri
ENSPTRG00000013446	RBM12	98	94.742	ENSECAG00000021997	RBM12	100	93.884	Equus_caballus
ENSPTRG00000013446	RBM12	98	93.991	ENSFDAG00000014663	RBM12	100	93.562	Fukomys_damarensis
ENSPTRG00000013446	RBM12	98	79.207	ENSGALG00000030253	RBM12	100	79.636	Gallus_gallus
ENSPTRG00000013446	RBM12	100	99.790	ENSGGOG00000028500	RBM12	100	99.790	Gorilla_gorilla
ENSPTRG00000013446	RBM12	98	94.099	ENSHGLG00000013208	RBM12	100	93.670	Heterocephalus_glaber_female
ENSPTRG00000013446	RBM12	88	97.022	ENSHGLG00100019158	RBM12	90	97.022	Heterocephalus_glaber_male
ENSPTRG00000013446	RBM12	98	90.336	ENSSTOG00000019739	RBM12	100	90.126	Ictidomys_tridecemlineatus
ENSPTRG00000013446	RBM12	98	93.670	ENSLAFG00000010341	RBM12	100	93.240	Loxodonta_africana
ENSPTRG00000013446	RBM12	100	99.476	ENSMFAG00000032583	RBM12	100	99.476	Macaca_fascicularis
ENSPTRG00000013446	RBM12	98	99.571	ENSMMUG00000020960	CPNE1	100	99.571	Macaca_mulatta
ENSPTRG00000013446	RBM12	100	99.581	ENSMNEG00000045365	RBM12	100	99.581	Macaca_nemestrina
ENSPTRG00000013446	RBM12	100	99.581	ENSMLEG00000032492	RBM12	100	99.581	Mandrillus_leucophaeus
ENSPTRG00000013446	RBM12	99	78.105	ENSMGAG00000001502	RBM12	100	79.479	Meleagris_gallopavo
ENSPTRG00000013446	RBM12	98	86.734	ENSMAUG00000012800	Rbm12	100	87.437	Mesocricetus_auratus
ENSPTRG00000013446	RBM12	100	93.291	ENSMICG00000032761	-	100	93.816	Microcebus_murinus
ENSPTRG00000013446	RBM12	98	85.300	ENSMICG00000029540	-	72	84.748	Microcebus_murinus
ENSPTRG00000013446	RBM12	98	80.321	ENSMOCG00000012950	Rbm12	100	92.776	Microtus_ochrogaster
ENSPTRG00000013446	RBM12	100	85.010	ENSMODG00000001591	RBM12	100	84.801	Monodelphis_domestica
ENSPTRG00000013446	RBM12	98	77.778	MGP_CAROLIEiJ_G0024551	Rbm12	98	93.295	Mus_caroli
ENSPTRG00000013446	RBM12	98	85.356	ENSMUSG00000089824	Rbm12	100	92.867	Mus_musculus
ENSPTRG00000013446	RBM12	98	78.373	MGP_PahariEiJ_G0025996	Rbm12	100	93.295	Mus_pahari
ENSPTRG00000013446	RBM12	71	94.412	MGP_SPRETEiJ_G0025473	Rbm12	99	93.010	Mus_spretus
ENSPTRG00000013446	RBM12	98	94.528	ENSMPUG00000017789	-	100	93.777	Mustela_putorius_furo
ENSPTRG00000013446	RBM12	100	94.025	ENSMLUG00000011217	RBM12	100	93.291	Myotis_lucifugus
ENSPTRG00000013446	RBM12	98	80.905	ENSNGAG00000015846	Rbm12	100	86.861	Nannospalax_galili
ENSPTRG00000013446	RBM12	100	99.686	ENSNLEG00000010268	RBM12	100	99.686	Nomascus_leucogenys
ENSPTRG00000013446	RBM12	98	84.871	ENSMEUG00000007621	RBM12	100	84.657	Notamacropus_eugenii
ENSPTRG00000013446	RBM12	98	92.144	ENSOPRG00000005687	RBM12	100	91.720	Ochotona_princeps
ENSPTRG00000013446	RBM12	84	89.157	ENSODEG00000013870	RBM12	100	86.442	Octodon_degus
ENSPTRG00000013446	RBM12	100	100.000	ENSPPAG00000040719	RBM12	100	100.000	Pan_paniscus
ENSPTRG00000013446	RBM12	100	99.581	ENSPANG00000020003	CPNE1	100	99.581	Papio_anubis
ENSPTRG00000013446	RBM12	88	85.821	ENSPSIG00000007369	RBM12	92	93.103	Pelodiscus_sinensis
ENSPTRG00000013446	RBM12	98	80.060	ENSPEMG00000017769	Rbm12	100	81.845	Peromyscus_maniculatus_bairdii
ENSPTRG00000013446	RBM12	58	82.609	ENSPFOG00000023551	rbm12	93	78.873	Poecilia_formosa
ENSPTRG00000013446	RBM12	98	99.679	ENSPPYG00000010960	RBM12	100	99.679	Pongo_abelii
ENSPTRG00000013446	RBM12	98	92.167	ENSPCAG00000008653	RBM12	100	91.416	Procavia_capensis
ENSPTRG00000013446	RBM12	100	96.226	ENSPCOG00000023724	RBM12	100	96.226	Propithecus_coquereli
ENSPTRG00000013446	RBM12	81	94.156	ENSPVAG00000014937	RBM12	100	93.670	Pteropus_vampyrus
ENSPTRG00000013446	RBM12	73	92.725	ENSRNOG00000019723	Rbm12	97	92.725	Rattus_norvegicus
ENSPTRG00000013446	RBM12	73	92.725	ENSRNOG00000049913	LOC100910990	97	92.725	Rattus_norvegicus
ENSPTRG00000013446	RBM12	100	99.581	ENSRBIG00000042965	RBM12	100	99.581	Rhinopithecus_bieti
ENSPTRG00000013446	RBM12	100	99.581	ENSRROG00000037485	RBM12	100	99.581	Rhinopithecus_roxellana
ENSPTRG00000013446	RBM12	100	98.323	ENSSBOG00000027633	RBM12	100	98.323	Saimiri_boliviensis_boliviensis
ENSPTRG00000013446	RBM12	98	85.408	ENSSHAG00000018585	RBM12	100	85.193	Sarcophilus_harrisii
ENSPTRG00000013446	RBM12	98	94.771	ENSSSCG00000036156	RBM12	100	94.023	Sus_scrofa
ENSPTRG00000013446	RBM12	98	79.614	ENSTGUG00000003002	RBM12	100	79.077	Taeniopygia_guttata
ENSPTRG00000013446	RBM12	98	94.313	ENSTTRG00000017035	RBM12	100	93.562	Tursiops_truncatus
ENSPTRG00000013446	RBM12	98	93.348	ENSUAMG00000010430	RBM12	100	94.099	Ursus_americanus
ENSPTRG00000013446	RBM12	86	100.000	ENSVPAG00000003812	RBM12	87	100.000	Vicugna_pacos
ENSPTRG00000013446	RBM12	98	60.443	ENSXETG00000033541	RBM12	74	65.919	Xenopus_tropicalis