EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPTRG00000013531 (Gene tree)
Gene ID
458273
Gene Symbol
PABPC1L
Alias
-
Full Name
poly(A) binding protein cytoplasmic 1 like
Gene Type
protein_coding
Species
Pan_troglodytes
Status
putative
Strand
Plus strand
Length
22183 bases
Position
chr20:46561340-46583522
Accession
9939
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTRP00000023243RRM_5PF13893.63.7e-0811
ENSPTRP00000023243RRM_1PF00076.222.2e-7614
ENSPTRP00000023243RRM_1PF00076.222.2e-7624
ENSPTRP00000023243RRM_1PF00076.222.2e-7634
ENSPTRP00000023243RRM_1PF00076.222.2e-7644
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTRT00000025184-2756XM_009437290ENSPTRP00000023243330 (aa)XP_009435565A0A2J8MKB1
Gene Model
Click here to download ENSPTRG00000013531's gene model file
Pathways
Pathway IDPathway NameSource
ptr03013RNA transportKEGG
ptr03015mRNA surveillance pathwayKEGG
ptr03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000013531's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPTRG00000013531PABPC1L9531.707ENSPTRG00000017273HNRNPA05232.692
ENSPTRG00000013531PABPC1L9878.395ENSPTRG00000047939PABPC16478.395
ENSPTRG00000013531PABPC1L6730.657ENSPTRG00000000136TARDBP5035.398
ENSPTRG00000013531PABPC1L9571.066ENSPTRG00000028252-9971.066
ENSPTRG00000013531PABPC1L9530.645ENSPTRG00000010413ELAVL18230.645
ENSPTRG00000013531PABPC1L9640.000ENSPTRG00000020830ELAVL29040.000
ENSPTRG00000013531PABPC1L9873.765ENSPTRG00000022593PABPC36173.765
ENSPTRG00000013531PABPC1L7330.128ENSPTRG00000049417HNRNPA16330.128
ENSPTRG00000013531PABPC1L9538.571ENSPTRG00000010506ELAVL39038.571
ENSPTRG00000013531PABPC1L6730.657ENSPTRG00000048576-5035.398
ENSPTRG00000013531PABPC1L6740.789ENSPTRG00000021864RBM37742.188
ENSPTRG00000013531PABPC1L9330.682ENSPTRG00000002996TIAL17630.682
ENSPTRG00000013531PABPC1L9557.556ENSPTRG00000022078PABPC59657.547
ENSPTRG00000013531PABPC1L6938.356ENSPTRG00000010259CELF56538.356
ENSPTRG00000013531PABPC1L7434.783ENSPTRG00000002284CELF26234.783
ENSPTRG00000013531PABPC1L9977.778ENSPTRG00000000573PABPC46177.778
ENSPTRG00000013531PABPC1L7435.450ENSPTRG00000049727-5835.450
ENSPTRG00000013531PABPC1L9861.846ENSPTRG00000045513-8061.846
ENSPTRG00000013531PABPC1L7330.435ENSPTRG00000052291-9030.065
ENSPTRG00000013531PABPC1L6436.232ENSPTRG00000052299CELF17036.232
ENSPTRG00000013531PABPC1L9738.095ENSPTRG00000001243SF3B45438.095
ENSPTRG00000013531PABPC1L9641.429ENSPTRG00000000723ELAVL47741.429
ENSPTRG00000013531PABPC1L5031.169ENSPTRG00000052587RBMX8234.375
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTRG00000013531PABPC1L10099.697ENSG00000101104PABPC1L10099.697Homo_sapiens
ENSPTRG00000013531PABPC1L9876.235ENSAPOG00000010842pabpc1l6376.235Acanthochromis_polyacanthus
ENSPTRG00000013531PABPC1L9993.827ENSAMEG00000004099PABPC1L6193.827Ailuropoda_melanoleuca
ENSPTRG00000013531PABPC1L9876.852ENSACIG00000021004-7275.920Amphilophus_citrinellus
ENSPTRG00000013531PABPC1L9875.926ENSAOCG00000006167-6175.926Amphiprion_ocellaris
ENSPTRG00000013531PABPC1L9880.693ENSAPEG00000010558-9780.693Amphiprion_percula
ENSPTRG00000013531PABPC1L9876.852ENSATEG00000007428pabpc1l6376.852Anabas_testudineus
ENSPTRG00000013531PABPC1L9580.952ENSAPLG00000008415PABPC1L6179.876Anas_platyrhynchos
ENSPTRG00000013531PABPC1L9883.025ENSACAG00000011841PABPC1L6183.025Anolis_carolinensis
ENSPTRG00000013531PABPC1L9997.222ENSANAG00000026826PABPC1L6397.222Aotus_nancymaae
ENSPTRG00000013531PABPC1L9876.543ENSACLG00000024791pabpc1l6276.543Astatotilapia_calliptera
ENSPTRG00000013531PABPC1L9879.012ENSAMXG00000013552pabpc1l6279.012Astyanax_mexicanus
ENSPTRG00000013531PABPC1L9896.429ENSBTAG00000055300-10096.429Bos_taurus
ENSPTRG00000013531PABPC1L8780.128ENSBTAG00000016849PABPC1L6580.128Bos_taurus
ENSPTRG00000013531PABPC1L8076.437ENSCJAG00000038506-10076.437Callithrix_jacchus
ENSPTRG00000013531PABPC1L9997.222ENSCJAG00000017628PABPC1L6397.222Callithrix_jacchus
ENSPTRG00000013531PABPC1L9993.210ENSCAFG00000009573PABPC1L6093.210Canis_familiaris
ENSPTRG00000013531PABPC1L9993.519ENSCAFG00020013828PABPC1L6393.519Canis_lupus_dingo
ENSPTRG00000013531PABPC1L9993.827ENSCHIG00000025759PABPC1L6093.827Capra_hircus
ENSPTRG00000013531PABPC1L9991.358ENSTSYG00000006645PABPC1L6391.358Carlito_syrichta
ENSPTRG00000013531PABPC1L9688.976ENSCAPG00000014519PABPC1L6288.976Cavia_aperea
ENSPTRG00000013531PABPC1L9989.506ENSCPOG00000013633PABPC1L6289.506Cavia_porcellus
ENSPTRG00000013531PABPC1L9997.222ENSCCAG00000023338PABPC1L6397.222Cebus_capucinus
ENSPTRG00000013531PABPC1L9999.383ENSCATG00000034065PABPC1L6399.383Cercocebus_atys
ENSPTRG00000013531PABPC1L9987.963ENSCLAG00000005298PABPC1L6287.963Chinchilla_lanigera
ENSPTRG00000013531PABPC1L9999.383ENSCSAG00000014242PABPC1L6399.383Chlorocebus_sabaeus
ENSPTRG00000013531PABPC1L9882.716ENSCPBG00000017755-8782.716Chrysemys_picta_bellii
ENSPTRG00000013531PABPC1L6878.788ENSCPBG00000007810-8178.788Chrysemys_picta_bellii
ENSPTRG00000013531PABPC1L9968.098ENSCSAVG00000004246-6768.489Ciona_savignyi
ENSPTRG00000013531PABPC1L9581.507ENSCSAVG00000003102-9881.507Ciona_savignyi
ENSPTRG00000013531PABPC1L9999.383ENSCANG00000037530PABPC1L6399.383Colobus_angolensis_palliatus
ENSPTRG00000013531PABPC1L9984.259ENSCGRG00001021938Pabpc1l6684.259Cricetulus_griseus_chok1gshd
ENSPTRG00000013531PABPC1L9984.259ENSCGRG00000007946Pabpc1l6684.259Cricetulus_griseus_crigri
ENSPTRG00000013531PABPC1L9776.636ENSCSEG00000021295pabpc1l6976.636Cynoglossus_semilaevis
ENSPTRG00000013531PABPC1L9885.496ENSCVAG00000015943-8685.496Cyprinodon_variegatus
ENSPTRG00000013531PABPC1L9886.154ENSDARG00000002597pabpc1l8886.154Danio_rerio
ENSPTRG00000013531PABPC1L9994.444ENSDNOG00000048450PABPC1L6394.444Dasypus_novemcinctus
ENSPTRG00000013531PABPC1L9989.506ENSDORG00000001067Pabpc1l6389.506Dipodomys_ordii
ENSPTRG00000013531PABPC1L7087.838ENSEASG00005023407-5587.838Equus_asinus_asinus
ENSPTRG00000013531PABPC1L9895.238ENSEASG00005023408-10095.238Equus_asinus_asinus
ENSPTRG00000013531PABPC1L8888.182ENSECAG00000040139-6288.182Equus_caballus
ENSPTRG00000013531PABPC1L9990.123ENSEEUG00000005978PABPC1L6390.123Erinaceus_europaeus
ENSPTRG00000013531PABPC1L9877.231ENSELUG00000001811pabpc1l7177.231Esox_lucius
ENSPTRG00000013531PABPC1L9994.136ENSFCAG00000011692PABPC1L6394.136Felis_catus
ENSPTRG00000013531PABPC1L9884.259ENSFALG00000005372PABPC1L6584.259Ficedula_albicollis
ENSPTRG00000013531PABPC1L9990.123ENSFDAG00000008291PABPC1L6590.123Fukomys_damarensis
ENSPTRG00000013531PABPC1L9877.160ENSFHEG00000003398pabpc1l6377.160Fundulus_heteroclitus
ENSPTRG00000013531PABPC1L9876.235ENSGMOG00000004437pabpc1l6676.235Gadus_morhua
ENSPTRG00000013531PABPC1L9883.025ENSGALG00000004123PABPC1L9283.025Gallus_gallus
ENSPTRG00000013531PABPC1L9869.944ENSGAFG00000021057pabpc1l6469.944Gambusia_affinis
ENSPTRG00000013531PABPC1L9876.543ENSGACG00000002792pabpc1l6276.543Gasterosteus_aculeatus
ENSPTRG00000013531PABPC1L9882.716ENSGAGG00000000589PABPC1L7082.716Gopherus_agassizii
ENSPTRG00000013531PABPC1L9999.691ENSGGOG00000004584PABPC1L6399.691Gorilla_gorilla
ENSPTRG00000013531PABPC1L9976.543ENSHBUG00000006134pabpc1l7776.543Haplochromis_burtoni
ENSPTRG00000013531PABPC1L9990.123ENSHGLG00000008434PABPC1L6390.123Heterocephalus_glaber_female
ENSPTRG00000013531PABPC1L9990.123ENSHGLG00100012151PABPC1L6390.123Heterocephalus_glaber_male
ENSPTRG00000013531PABPC1L9881.461ENSHGLG00100019506-10081.461Heterocephalus_glaber_male
ENSPTRG00000013531PABPC1L9877.469ENSHCOG00000009270pabpc1l6877.469Hippocampus_comes
ENSPTRG00000013531PABPC1L8164.615ENSIPUG00000005537-10064.615Ictalurus_punctatus
ENSPTRG00000013531PABPC1L9561.494ENSIPUG00000006760-8861.494Ictalurus_punctatus
ENSPTRG00000013531PABPC1L9879.321ENSIPUG00000012602pabpc1l6779.321Ictalurus_punctatus
ENSPTRG00000013531PABPC1L9562.069ENSIPUG00000006780-8562.069Ictalurus_punctatus
ENSPTRG00000013531PABPC1L9992.593ENSSTOG00000003739PABPC1L6392.593Ictidomys_tridecemlineatus
ENSPTRG00000013531PABPC1L9877.469ENSKMAG00000016847pabpc1l6877.469Kryptolebias_marmoratus
ENSPTRG00000013531PABPC1L9976.543ENSLBEG00000010084pabpc1l6476.543Labrus_bergylta
ENSPTRG00000013531PABPC1L9880.247ENSLACG00000005762PABPC1L7080.247Latimeria_chalumnae
ENSPTRG00000013531PABPC1L9878.704ENSLOCG00000007519pabpc1l6178.704Lepisosteus_oculatus
ENSPTRG00000013531PABPC1L9892.593ENSLAFG00000003553PABPC1L6292.593Loxodonta_africana
ENSPTRG00000013531PABPC1L9999.383ENSMFAG00000040365PABPC1L6399.383Macaca_fascicularis
ENSPTRG00000013531PABPC1L9999.383ENSMNEG00000032298PABPC1L6399.383Macaca_nemestrina
ENSPTRG00000013531PABPC1L9999.383ENSMLEG00000043139PABPC1L6399.383Mandrillus_leucophaeus
ENSPTRG00000013531PABPC1L9876.235ENSMAMG00000011854pabpc1l6376.235Mastacembelus_armatus
ENSPTRG00000013531PABPC1L9876.543ENSMZEG00005023713pabpc1l6276.543Maylandia_zebra
ENSPTRG00000013531PABPC1L9883.333ENSMGAG00000003674PABPC1L6283.333Meleagris_gallopavo
ENSPTRG00000013531PABPC1L9984.877ENSMOCG00000013186Pabpc1l6684.877Microtus_ochrogaster
ENSPTRG00000013531PABPC1L10086.154ENSMMOG00000020574-9386.154Mola_mola
ENSPTRG00000013531PABPC1L9888.272ENSMODG00000016198PABPC1L6788.272Monodelphis_domestica
ENSPTRG00000013531PABPC1L9875.926ENSMALG00000021622pabpc1l6475.926Monopterus_albus
ENSPTRG00000013531PABPC1L9984.259MGP_CAROLIEiJ_G0024627Pabpc1l6384.259Mus_caroli
ENSPTRG00000013531PABPC1L9984.259ENSMUSG00000054582Pabpc1l6384.259Mus_musculus
ENSPTRG00000013531PABPC1L9984.259MGP_PahariEiJ_G0026071Pabpc1l6384.259Mus_pahari
ENSPTRG00000013531PABPC1L9984.259MGP_SPRETEiJ_G0025549Pabpc1l6384.259Mus_spretus
ENSPTRG00000013531PABPC1L9893.519ENSMPUG00000017646PABPC1L6293.519Mustela_putorius_furo
ENSPTRG00000013531PABPC1L9987.156ENSMLUG00000006324PABPC1L6187.156Myotis_lucifugus
ENSPTRG00000013531PABPC1L9987.346ENSNGAG00000010458Pabpc1l6387.346Nannospalax_galili
ENSPTRG00000013531PABPC1L9976.543ENSNBRG00000016633pabpc1l7576.543Neolamprologus_brichardi
ENSPTRG00000013531PABPC1L9885.802ENSMEUG00000007905-6485.802Notamacropus_eugenii
ENSPTRG00000013531PABPC1L9991.975ENSOPRG00000011846PABPC1L6391.975Ochotona_princeps
ENSPTRG00000013531PABPC1L9989.198ENSODEG00000015482PABPC1L7189.198Octodon_degus
ENSPTRG00000013531PABPC1L9874.375ENSODEG00000002920-9774.375Octodon_degus
ENSPTRG00000013531PABPC1L9876.543ENSONIG00000017314pabpc1l6276.543Oreochromis_niloticus
ENSPTRG00000013531PABPC1L9871.254ENSOANG00000015793-6971.254Ornithorhynchus_anatinus
ENSPTRG00000013531PABPC1L9992.593ENSOCUG00000003005PABPC1L5992.593Oryctolagus_cuniculus
ENSPTRG00000013531PABPC1L9977.160ENSORLG00000010322pabpc1l7276.254Oryzias_latipes
ENSPTRG00000013531PABPC1L9977.160ENSORLG00020021193pabpc1l7276.254Oryzias_latipes_hni
ENSPTRG00000013531PABPC1L9977.160ENSORLG00015017018pabpc1l7276.254Oryzias_latipes_hsok
ENSPTRG00000013531PABPC1L9871.105ENSOMEG00000010789pabpc1l6371.105Oryzias_melastigma
ENSPTRG00000013531PABPC1L9993.827ENSOGAG00000032999PABPC1L6293.827Otolemur_garnettii
ENSPTRG00000013531PABPC1L9994.136ENSOARG00000004578PABPC1L6394.136Ovis_aries
ENSPTRG00000013531PABPC1L99100.000ENSPPAG00000039677PABPC1L63100.000Pan_paniscus
ENSPTRG00000013531PABPC1L10081.818ENSPPRG00000019327-10081.818Panthera_pardus
ENSPTRG00000013531PABPC1L9794.340ENSPTIG00000006524PABPC1L6394.340Panthera_tigris_altaica
ENSPTRG00000013531PABPC1L9999.383ENSPANG00000018788PABPC1L6399.383Papio_anubis
ENSPTRG00000013531PABPC1L9879.012ENSPKIG00000007322pabpc1l6279.012Paramormyrops_kingsleyae
ENSPTRG00000013531PABPC1L9882.308ENSPKIG00000016810-9282.308Paramormyrops_kingsleyae
ENSPTRG00000013531PABPC1L9882.716ENSPSIG00000013289PABPC1L9182.716Pelodiscus_sinensis
ENSPTRG00000013531PABPC1L9677.027ENSPMGG00000023121-8077.027Periophthalmus_magnuspinnatus
ENSPTRG00000013531PABPC1L9886.364ENSPMGG00000023117pabpc1l9286.364Periophthalmus_magnuspinnatus
ENSPTRG00000013531PABPC1L9984.877ENSPEMG00000020671Pabpc1l6684.877Peromyscus_maniculatus_bairdii
ENSPTRG00000013531PABPC1L9876.235ENSPFOG00000013241pabpc1l6376.235Poecilia_formosa
ENSPTRG00000013531PABPC1L9876.235ENSPLAG00000017490-6976.235Poecilia_latipinna
ENSPTRG00000013531PABPC1L9886.260ENSPLAG00000023686-9286.260Poecilia_latipinna
ENSPTRG00000013531PABPC1L9886.260ENSPMEG00000009185-8986.260Poecilia_mexicana
ENSPTRG00000013531PABPC1L9876.235ENSPMEG00000007677pabpc1l6376.235Poecilia_mexicana
ENSPTRG00000013531PABPC1L9876.235ENSPREG00000015886pabpc1l9476.235Poecilia_reticulata
ENSPTRG00000013531PABPC1L9999.691ENSPPYG00000011042PABPC1L6399.691Pongo_abelii
ENSPTRG00000013531PABPC1L8293.750ENSPCAG00000011787-6893.750Procavia_capensis
ENSPTRG00000013531PABPC1L9993.827ENSPCOG00000020630PABPC1L6393.827Propithecus_coquereli
ENSPTRG00000013531PABPC1L9991.358ENSPVAG00000012663PABPC1L6491.358Pteropus_vampyrus
ENSPTRG00000013531PABPC1L9876.543ENSPNYG00000004101pabpc1l7275.585Pundamilia_nyererei
ENSPTRG00000013531PABPC1L9878.704ENSPNAG00000021248pabpc1l5678.704Pygocentrus_nattereri
ENSPTRG00000013531PABPC1L9985.494ENSRNOG00000012750Pabpc1l6485.494Rattus_norvegicus
ENSPTRG00000013531PABPC1L9999.074ENSRBIG00000035381PABPC1L6399.074Rhinopithecus_bieti
ENSPTRG00000013531PABPC1L9998.457ENSRROG00000044498PABPC1L6398.457Rhinopithecus_roxellana
ENSPTRG00000013531PABPC1L9996.605ENSSBOG00000009532-6396.605Saimiri_boliviensis_boliviensis
ENSPTRG00000013531PABPC1L9583.163ENSSHAG00000011446PABPC1L5483.163Sarcophilus_harrisii
ENSPTRG00000013531PABPC1L9879.630ENSSFOG00015017304pabpc1l6279.630Scleropages_formosus
ENSPTRG00000013531PABPC1L9887.597ENSSMAG00000010516pabpc1l9887.597Scophthalmus_maximus
ENSPTRG00000013531PABPC1L9977.469ENSSDUG00000014743pabpc1l6277.469Seriola_dumerili
ENSPTRG00000013531PABPC1L9976.543ENSSLDG00000006981pabpc1l9077.169Seriola_lalandi_dorsalis
ENSPTRG00000013531PABPC1L9881.481ENSSPUG00000004233PABPC1L6181.481Sphenodon_punctatus
ENSPTRG00000013531PABPC1L9875.926ENSSPAG00000017137pabpc1l6975.926Stegastes_partitus
ENSPTRG00000013531PABPC1L9992.901ENSSSCG00000007382PABPC1L6492.901Sus_scrofa
ENSPTRG00000013531PABPC1L9881.548ENSTGUG00000005114PABPC1L6381.548Taeniopygia_guttata
ENSPTRG00000013531PABPC1L9877.469ENSTRUG00000011085pabpc1l6377.469Takifugu_rubripes
ENSPTRG00000013531PABPC1L9873.846ENSTNIG00000017903pabpc1l6773.846Tetraodon_nigroviridis
ENSPTRG00000013531PABPC1L9889.815ENSTTRG00000007618PABPC1L6589.815Tursiops_truncatus
ENSPTRG00000013531PABPC1L9994.136ENSUAMG00000017682PABPC1L6694.136Ursus_americanus
ENSPTRG00000013531PABPC1L9691.729ENSUMAG00000025436PABPC1L8491.729Ursus_maritimus
ENSPTRG00000013531PABPC1L9993.827ENSVVUG00000018939PABPC1L6493.827Vulpes_vulpes
ENSPTRG00000013531PABPC1L9873.765ENSXETG00000022831pabpc1l6173.765Xenopus_tropicalis
ENSPTRG00000013531PABPC1L9882.270ENSXCOG00000005459pabpc1l9982.270Xiphophorus_couchianus
ENSPTRG00000013531PABPC1L9876.852ENSXMAG00000017135pabpc1l6976.852Xiphophorus_maculatus

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