EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTRG00000013661 (Gene tree)
Gene ID: -
Gene Symbol: RBM38
Alias: -
Full Name: RNA binding motif protein 38
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Plus strand
Length: 16779 bases
Position: chr20:59380436-59397214
Accession: 15818
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000070470	RRM_1	PF00076.22	2.2e-18	1	1
ENSPTRP00000043513	RRM_1	PF00076.22	4.7e-18	1	1
ENSPTRP00000092717	RRM_1	PF00076.22	6.7e-18	1	1
ENSPTRP00000079216	RRM_1	PF00076.22	4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000025456	RBM38-202	525	-	ENSPTRP00000043513	174 (aa)	-	H2R276
ENSPTRT00000091103	RBM38-204	624	-	ENSPTRP00000092717	207 (aa)	-	A0A2I3TUQ4
ENSPTRT00000091911	RBM38-201	366	-	ENSPTRP00000070470	121 (aa)	-	A0A2I3S0U1
ENSPTRT00000084069	RBM38-203	234	-	ENSPTRP00000079216	77 (aa)	-	A0A2I3SQI2

Gene Model

Click here to download ENSPTRG00000013661's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000013661's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTRG00000013661	RBM38	68	42.667	ENSPTRG00000018253	-	51	42.667
ENSPTRG00000013661	RBM38	67	38.667	ENSPTRG00000017273	HNRNPA0	50	38.667
ENSPTRG00000013661	RBM38	71	34.177	ENSPTRG00000017601	HNRNPAB	54	34.177
ENSPTRG00000013661	RBM38	59	30.986	ENSPTRG00000030691	SLIRP	73	30.882
ENSPTRG00000013661	RBM38	62	42.105	ENSPTRG00000021864	RBM3	69	43.548
ENSPTRG00000013661	RBM38	62	34.667	ENSPTRG00000044048	-	69	34.177
ENSPTRG00000013661	RBM38	64	44.118	ENSPTRG00000049417	HNRNPA1	55	44.118
ENSPTRG00000013661	RBM38	70	34.884	ENSPTRG00000009692	SRSF2	52	31.373
ENSPTRG00000013661	RBM38	64	40.000	ENSPTRG00000052830	-	53	40.000
ENSPTRG00000013661	RBM38	79	42.373	ENSPTRG00000005531	MSI1	69	36.471
ENSPTRG00000013661	RBM38	81	100.000	ENSPTRG00000045845	-	70	97.656
ENSPTRG00000013661	RBM38	62	39.474	ENSPTRG00000052587	RBMX	79	41.935
ENSPTRG00000013661	RBM38	97	35.294	ENSPTRG00000010199	DAZAP1	50	34.862
ENSPTRG00000013661	RBM38	69	41.667	ENSPTRG00000010192	CIRBP	50	41.667
ENSPTRG00000013661	RBM38	81	91.837	ENSPTRG00000017749	RBM24	79	72.414
ENSPTRG00000013661	RBM38	94	34.722	ENSPTRG00000009437	MSI2	92	39.286
ENSPTRG00000013661	RBM38	74	42.857	ENSPTRG00000019002	HNRNPA2B1	65	42.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000013661	RBM38	100	100.000	ENSG00000132819	RBM38	100	100.000	Homo_sapiens
ENSPTRG00000013661	RBM38	82	90.099	ENSAPOG00000009939	-	83	73.404	Acanthochromis_polyacanthus
ENSPTRG00000013661	RBM38	81	85.859	ENSAPOG00000003301	rbm38	76	64.583	Acanthochromis_polyacanthus
ENSPTRG00000013661	RBM38	81	92.929	ENSACIG00000012502	-	100	88.889	Amphilophus_citrinellus
ENSPTRG00000013661	RBM38	81	85.859	ENSACIG00000000010	rbm38	75	63.542	Amphilophus_citrinellus
ENSPTRG00000013661	RBM38	81	85.859	ENSAOCG00000013497	-	76	64.583	Amphiprion_ocellaris
ENSPTRG00000013661	RBM38	100	79.675	ENSAOCG00000012559	RBM38	79	73.404	Amphiprion_ocellaris
ENSPTRG00000013661	RBM38	82	90.099	ENSAPEG00000023581	-	75	73.404	Amphiprion_percula
ENSPTRG00000013661	RBM38	99	75.806	ENSAPEG00000013137	rbm38	81	64.583	Amphiprion_percula
ENSPTRG00000013661	RBM38	81	84.848	ENSATEG00000016366	rbm38	83	64.103	Anabas_testudineus
ENSPTRG00000013661	RBM38	82	89.109	ENSATEG00000016710	-	72	75.275	Anabas_testudineus
ENSPTRG00000013661	RBM38	82	91.919	ENSACAG00000016238	RBM38	79	80.829	Anolis_carolinensis
ENSPTRG00000013661	RBM38	100	99.174	ENSANAG00000031959	RBM38	100	99.174	Aotus_nancymaae
ENSPTRG00000013661	RBM38	78	94.681	ENSACLG00000019514	-	73	75.676	Astatotilapia_calliptera
ENSPTRG00000013661	RBM38	76	88.043	ENSAMXG00000038120	rbm38	76	64.324	Astyanax_mexicanus
ENSPTRG00000013661	RBM38	82	91.089	ENSAMXG00000015601	-	78	73.298	Astyanax_mexicanus
ENSPTRG00000013661	RBM38	100	97.521	ENSBTAG00000008105	RBM38	87	93.750	Bos_taurus
ENSPTRG00000013661	RBM38	74	85.393	WBGene00006321	sup-12	59	85.393	Caenorhabditis_elegans
ENSPTRG00000013661	RBM38	100	99.174	ENSCJAG00000019139	RBM38	100	99.174	Callithrix_jacchus
ENSPTRG00000013661	RBM38	100	98.347	ENSCAFG00020021943	RBM38	87	93.269	Canis_lupus_dingo
ENSPTRG00000013661	RBM38	100	96.694	ENSCHIG00000002609	RBM38	86	92.233	Capra_hircus
ENSPTRG00000013661	RBM38	100	99.174	ENSCPOG00000012781	RBM38	87	93.269	Cavia_porcellus
ENSPTRG00000013661	RBM38	100	99.174	ENSCCAG00000036872	RBM38	100	99.174	Cebus_capucinus
ENSPTRG00000013661	RBM38	100	99.174	ENSCATG00000032133	RBM38	100	99.174	Cercocebus_atys
ENSPTRG00000013661	RBM38	100	93.269	ENSCLAG00000005906	RBM38	90	93.269	Chinchilla_lanigera
ENSPTRG00000013661	RBM38	100	99.174	ENSCSAG00000015503	RBM38	83	99.490	Chlorocebus_sabaeus
ENSPTRG00000013661	RBM38	98	82.039	ENSCPBG00000024059	RBM38	94	82.039	Chrysemys_picta_bellii
ENSPTRG00000013661	RBM38	80	84.536	ENSCSAVG00000001132	-	59	62.658	Ciona_savignyi
ENSPTRG00000013661	RBM38	99	81.667	ENSCANG00000030105	-	71	74.227	Colobus_angolensis_palliatus
ENSPTRG00000013661	RBM38	100	95.041	ENSCGRG00001012928	Rbm38	88	89.904	Cricetulus_griseus_chok1gshd
ENSPTRG00000013661	RBM38	79	82.292	ENSCSEG00000020943	rbm38	67	58.738	Cynoglossus_semilaevis
ENSPTRG00000013661	RBM38	78	93.617	ENSCSEG00000004701	-	78	75.824	Cynoglossus_semilaevis
ENSPTRG00000013661	RBM38	78	95.745	ENSCVAG00000005472	-	72	76.374	Cyprinodon_variegatus
ENSPTRG00000013661	RBM38	76	91.304	ENSCVAG00000015952	rbm38	76	64.433	Cyprinodon_variegatus
ENSPTRG00000013661	RBM38	78	92.553	ENSDARG00000058818	rbm38	80	69.588	Danio_rerio
ENSPTRG00000013661	RBM38	98	89.655	ENSDNOG00000032004	RBM38	94	89.655	Dasypus_novemcinctus
ENSPTRG00000013661	RBM38	88	84.112	ENSEBUG00000015164	rbm38	85	68.085	Eptatretus_burgeri
ENSPTRG00000013661	RBM38	100	97.521	ENSECAG00000007700	RBM38	87	92.308	Equus_caballus
ENSPTRG00000013661	RBM38	100	94.215	ENSEEUG00000013489	RBM38	87	91.866	Erinaceus_europaeus
ENSPTRG00000013661	RBM38	81	88.889	ENSELUG00000000585	-	82	66.138	Esox_lucius
ENSPTRG00000013661	RBM38	81	89.000	ENSELUG00000005849	-	76	72.251	Esox_lucius
ENSPTRG00000013661	RBM38	100	97.521	ENSFCAG00000042916	RBM38	100	97.521	Felis_catus
ENSPTRG00000013661	RBM38	85	93.204	ENSFALG00000010805	RBM38	92	83.616	Ficedula_albicollis
ENSPTRG00000013661	RBM38	77	91.398	ENSFHEG00000017748	rbm38	77	63.077	Fundulus_heteroclitus
ENSPTRG00000013661	RBM38	78	95.745	ENSFHEG00000006160	-	79	76.374	Fundulus_heteroclitus
ENSPTRG00000013661	RBM38	78	93.617	ENSGMOG00000016655	-	96	74.725	Gadus_morhua
ENSPTRG00000013661	RBM38	81	94.898	ENSGALG00000026081	RBM38	89	81.538	Gallus_gallus
ENSPTRG00000013661	RBM38	80	85.714	ENSGACG00000015224	rbm38	85	67.222	Gasterosteus_aculeatus
ENSPTRG00000013661	RBM38	81	88.000	ENSGACG00000009873	-	91	68.627	Gasterosteus_aculeatus
ENSPTRG00000013661	RBM38	98	82.524	ENSGAGG00000001187	RBM38	94	82.524	Gopherus_agassizii
ENSPTRG00000013661	RBM38	78	94.681	ENSHBUG00000011778	-	78	75.401	Haplochromis_burtoni
ENSPTRG00000013661	RBM38	94	77.586	ENSHBUG00000012058	rbm38	81	63.636	Haplochromis_burtoni
ENSPTRG00000013661	RBM38	100	97.521	ENSHGLG00000015077	RBM38	87	88.942	Heterocephalus_glaber_female
ENSPTRG00000013661	RBM38	88	77.358	ENSHCOG00000019040	rbm38	79	58.511	Hippocampus_comes
ENSPTRG00000013661	RBM38	82	89.109	ENSHCOG00000005622	-	54	73.438	Hippocampus_comes
ENSPTRG00000013661	RBM38	82	91.089	ENSIPUG00000019349	-	76	73.262	Ictalurus_punctatus
ENSPTRG00000013661	RBM38	96	94.595	ENSJJAG00000016299	-	93	94.595	Jaculus_jaculus
ENSPTRG00000013661	RBM38	74	86.517	ENSKMAG00000012402	rbm38	83	58.586	Kryptolebias_marmoratus
ENSPTRG00000013661	RBM38	81	85.859	ENSLBEG00000018878	rbm38	77	63.776	Labrus_bergylta
ENSPTRG00000013661	RBM38	78	93.617	ENSLBEG00000016163	RBM38	83	71.357	Labrus_bergylta
ENSPTRG00000013661	RBM38	82	91.000	ENSLOCG00000003456	rbm38	84	74.129	Lepisosteus_oculatus
ENSPTRG00000013661	RBM38	97	99.145	ENSMFAG00000043808	RBM38	97	99.145	Macaca_fascicularis
ENSPTRG00000013661	RBM38	100	99.174	ENSMMUG00000031391	RBM38	100	99.174	Macaca_mulatta
ENSPTRG00000013661	RBM38	100	99.174	ENSMNEG00000034683	RBM38	100	99.174	Macaca_nemestrina
ENSPTRG00000013661	RBM38	77	81.720	ENSMLEG00000043261	-	88	84.404	Mandrillus_leucophaeus
ENSPTRG00000013661	RBM38	82	90.099	ENSMAMG00000020499	RBM38	75	74.468	Mastacembelus_armatus
ENSPTRG00000013661	RBM38	81	84.848	ENSMAMG00000024135	rbm38	76	64.583	Mastacembelus_armatus
ENSPTRG00000013661	RBM38	81	84.848	ENSMZEG00005026036	rbm38	78	62.944	Maylandia_zebra
ENSPTRG00000013661	RBM38	78	94.681	ENSMZEG00005000849	-	78	75.401	Maylandia_zebra
ENSPTRG00000013661	RBM38	100	95.041	ENSMAUG00000021211	Rbm38	88	90.385	Mesocricetus_auratus
ENSPTRG00000013661	RBM38	98	94.118	ENSMICG00000038011	RBM38	94	94.118	Microcebus_murinus
ENSPTRG00000013661	RBM38	100	93.388	ENSMOCG00000008715	Rbm38	88	90.865	Microtus_ochrogaster
ENSPTRG00000013661	RBM38	96	82.759	ENSMMOG00000020051	-	78	75.275	Mola_mola
ENSPTRG00000013661	RBM38	100	87.603	ENSMODG00000016458	RBM38	82	83.505	Monodelphis_domestica
ENSPTRG00000013661	RBM38	82	90.099	ENSMALG00000004680	RBM38	70	74.074	Monopterus_albus
ENSPTRG00000013661	RBM38	81	81.633	ENSMALG00000022327	rbm38	67	69.677	Monopterus_albus
ENSPTRG00000013661	RBM38	100	94.215	MGP_CAROLIEiJ_G0024745	Rbm38	92	90.541	Mus_caroli
ENSPTRG00000013661	RBM38	100	94.215	ENSMUSG00000027510	Rbm38	92	90.541	Mus_musculus
ENSPTRG00000013661	RBM38	100	95.041	MGP_PahariEiJ_G0026186	Rbm38	92	91.892	Mus_pahari
ENSPTRG00000013661	RBM38	100	94.215	MGP_SPRETEiJ_G0025665	Rbm38	92	90.541	Mus_spretus
ENSPTRG00000013661	RBM38	89	97.838	ENSMPUG00000006518	RBM38	93	97.861	Mustela_putorius_furo
ENSPTRG00000013661	RBM38	98	90.196	ENSMLUG00000011140	RBM38	94	90.196	Myotis_lucifugus
ENSPTRG00000013661	RBM38	94	93.151	ENSNGAG00000014017	-	64	93.243	Nannospalax_galili
ENSPTRG00000013661	RBM38	82	90.099	ENSNBRG00000022545	-	73	75.676	Neolamprologus_brichardi
ENSPTRG00000013661	RBM38	94	78.448	ENSNBRG00000022685	rbm38	81	63.959	Neolamprologus_brichardi
ENSPTRG00000013661	RBM38	100	80.992	ENSMEUG00000005475	-	88	84.615	Notamacropus_eugenii
ENSPTRG00000013661	RBM38	100	99.174	ENSODEG00000007980	RBM38	87	93.750	Octodon_degus
ENSPTRG00000013661	RBM38	81	84.848	ENSONIG00000017073	rbm38	79	63.452	Oreochromis_niloticus
ENSPTRG00000013661	RBM38	82	90.099	ENSONIG00000020324	-	74	75.676	Oreochromis_niloticus
ENSPTRG00000013661	RBM38	99	79.024	ENSOANG00000009259	RBM38	79	80.000	Ornithorhynchus_anatinus
ENSPTRG00000013661	RBM38	78	87.368	ENSORLG00000012154	rbm38	75	61.458	Oryzias_latipes
ENSPTRG00000013661	RBM38	82	89.109	ENSORLG00000027180	-	72	74.725	Oryzias_latipes
ENSPTRG00000013661	RBM38	82	89.109	ENSORLG00020020751	-	72	74.725	Oryzias_latipes_hni
ENSPTRG00000013661	RBM38	80	85.714	ENSORLG00020017871	rbm38	75	62.500	Oryzias_latipes_hni
ENSPTRG00000013661	RBM38	82	89.109	ENSORLG00015017040	-	72	74.725	Oryzias_latipes_hsok
ENSPTRG00000013661	RBM38	94	78.947	ENSORLG00015012606	rbm38	81	61.340	Oryzias_latipes_hsok
ENSPTRG00000013661	RBM38	82	89.109	ENSOMEG00000023912	-	72	73.626	Oryzias_melastigma
ENSPTRG00000013661	RBM38	80	84.694	ENSOMEG00000006805	rbm38	75	62.500	Oryzias_melastigma
ENSPTRG00000013661	RBM38	100	98.361	ENSOGAG00000029136	RBM38	86	95.146	Otolemur_garnettii
ENSPTRG00000013661	RBM38	64	97.959	ENSPPAG00000040327	-	93	81.579	Pan_paniscus
ENSPTRG00000013661	RBM38	100	97.521	ENSPPRG00000009507	RBM38	100	97.521	Panthera_pardus
ENSPTRG00000013661	RBM38	100	99.174	ENSPANG00000020919	-	100	99.174	Papio_anubis
ENSPTRG00000013661	RBM38	99	75.243	ENSPANG00000033127	-	86	75.243	Papio_anubis
ENSPTRG00000013661	RBM38	84	85.849	ENSPKIG00000025417	rbm38	87	64.815	Paramormyrops_kingsleyae
ENSPTRG00000013661	RBM38	83	92.079	ENSPKIG00000018122	-	100	88.034	Paramormyrops_kingsleyae
ENSPTRG00000013661	RBM38	93	87.500	ENSPSIG00000011649	RBM38	88	81.159	Pelodiscus_sinensis
ENSPTRG00000013661	RBM38	78	87.234	ENSPMGG00000017094	-	72	72.283	Periophthalmus_magnuspinnatus
ENSPTRG00000013661	RBM38	81	84.848	ENSPMGG00000011343	rbm38	74	64.706	Periophthalmus_magnuspinnatus
ENSPTRG00000013661	RBM38	100	87.603	ENSPCIG00000013648	RBM38	82	82.990	Phascolarctos_cinereus
ENSPTRG00000013661	RBM38	78	90.426	ENSPFOG00000011658	rbm38	77	63.265	Poecilia_formosa
ENSPTRG00000013661	RBM38	78	90.426	ENSPLAG00000005218	rbm38	77	63.265	Poecilia_latipinna
ENSPTRG00000013661	RBM38	78	95.745	ENSPLAG00000002500	-	72	76.757	Poecilia_latipinna
ENSPTRG00000013661	RBM38	78	90.426	ENSPMEG00000015770	rbm38	77	63.265	Poecilia_mexicana
ENSPTRG00000013661	RBM38	78	90.426	ENSPREG00000007398	rbm38	77	63.776	Poecilia_reticulata
ENSPTRG00000013661	RBM38	100	98.361	ENSPCOG00000026201	RBM38	100	98.361	Propithecus_coquereli
ENSPTRG00000013661	RBM38	95	94.521	ENSPVAG00000006457	RBM38	87	61.165	Pteropus_vampyrus
ENSPTRG00000013661	RBM38	88	78.899	ENSPNYG00000021373	rbm38	76	65.385	Pundamilia_nyererei
ENSPTRG00000013661	RBM38	81	93.939	ENSPNYG00000019727	-	100	89.744	Pundamilia_nyererei
ENSPTRG00000013661	RBM38	79	91.667	ENSPNAG00000010596	rbm38	76	69.892	Pygocentrus_nattereri
ENSPTRG00000013661	RBM38	82	91.089	ENSPNAG00000015123	-	96	78.030	Pygocentrus_nattereri
ENSPTRG00000013661	RBM38	100	95.041	ENSRNOG00000006420	Rbm38	88	92.308	Rattus_norvegicus
ENSPTRG00000013661	RBM38	100	89.256	ENSRROG00000036388	-	98	75.269	Rhinopithecus_roxellana
ENSPTRG00000013661	RBM38	98	94.118	ENSSBOG00000031053	RBM38	100	99.065	Saimiri_boliviensis_boliviensis
ENSPTRG00000013661	RBM38	78	93.617	ENSSFOG00015004453	rbm38	82	72.081	Scleropages_formosus
ENSPTRG00000013661	RBM38	81	90.000	ENSSDUG00000021082	RBM38	81	70.443	Seriola_dumerili
ENSPTRG00000013661	RBM38	81	85.859	ENSSDUG00000022611	rbm38	77	64.796	Seriola_dumerili
ENSPTRG00000013661	RBM38	78	93.617	ENSSLDG00000011778	RBM38	81	70.443	Seriola_lalandi_dorsalis
ENSPTRG00000013661	RBM38	81	85.859	ENSSLDG00000010845	rbm38	86	64.000	Seriola_lalandi_dorsalis
ENSPTRG00000013661	RBM38	81	85.859	ENSSPAG00000011113	rbm38	76	64.583	Stegastes_partitus
ENSPTRG00000013661	RBM38	82	89.109	ENSSPAG00000020989	RBM38	80	74.176	Stegastes_partitus
ENSPTRG00000013661	RBM38	100	98.347	ENSSSCG00000007504	RBM38	87	94.712	Sus_scrofa
ENSPTRG00000013661	RBM38	78	93.617	ENSTRUG00000019869	-	74	75.401	Takifugu_rubripes
ENSPTRG00000013661	RBM38	78	88.298	ENSTRUG00000024954	rbm38	78	62.245	Takifugu_rubripes
ENSPTRG00000013661	RBM38	81	91.000	ENSTNIG00000007093	-	88	72.637	Tetraodon_nigroviridis
ENSPTRG00000013661	RBM38	98	89.076	ENSTBEG00000001689	-	50	89.076	Tupaia_belangeri
ENSPTRG00000013661	RBM38	100	98.347	ENSUAMG00000019780	RBM38	87	94.712	Ursus_americanus
ENSPTRG00000013661	RBM38	100	98.347	ENSVVUG00000017246	RBM38	87	93.269	Vulpes_vulpes
ENSPTRG00000013661	RBM38	83	90.099	ENSXETG00000011268	rbm38	86	78.974	Xenopus_tropicalis
ENSPTRG00000013661	RBM38	78	95.745	ENSXCOG00000017324	-	60	78.947	Xiphophorus_couchianus
ENSPTRG00000013661	RBM38	77	91.398	ENSXMAG00000023662	rbm38	77	63.590	Xiphophorus_maculatus