EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTRG00000013852 (Gene tree)
Gene ID: 473954
Gene Symbol: URB1
Alias: -
Full Name: URB1 ribosome biogenesis 1 homolog
Gene Type: protein_coding
Species: Pan_troglodytes
Status: putative
Strand: Minus strand
Length: 79428 bases
Position: chr21:18758382-18837809
Accession: 7585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTRP00000023842	Npa1	PF11707.8	1.1e-86	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTRT00000025833	-	8395	XM_016938461	ENSPTRP00000023842	2271 (aa)	XP_016793950	H2QKY5

Gene Model

Click here to download ENSPTRG00000013852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTRG00000013852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTRG00000013852	URB1	100	98.987	ENSG00000142207	URB1	100	98.987	Homo_sapiens
ENSPTRG00000013852	URB1	99	42.777	ENSAPOG00000020308	urb1	99	43.145	Acanthochromis_polyacanthus
ENSPTRG00000013852	URB1	100	82.306	ENSAMEG00000011998	URB1	99	82.350	Ailuropoda_melanoleuca
ENSPTRG00000013852	URB1	94	44.507	ENSACIG00000003248	urb1	96	44.507	Amphilophus_citrinellus
ENSPTRG00000013852	URB1	99	40.721	ENSAOCG00000010364	urb1	100	40.895	Amphiprion_ocellaris
ENSPTRG00000013852	URB1	97	53.109	ENSAPEG00000010758	urb1	99	53.109	Amphiprion_percula
ENSPTRG00000013852	URB1	99	43.242	ENSATEG00000011790	urb1	97	44.133	Anabas_testudineus
ENSPTRG00000013852	URB1	97	56.428	ENSAPLG00000012791	URB1	100	56.428	Anas_platyrhynchos
ENSPTRG00000013852	URB1	99	53.792	ENSACAG00000002817	URB1	98	53.738	Anolis_carolinensis
ENSPTRG00000013852	URB1	100	93.706	ENSANAG00000024617	URB1	100	93.706	Aotus_nancymaae
ENSPTRG00000013852	URB1	99	45.013	ENSACLG00000024865	urb1	99	44.846	Astatotilapia_calliptera
ENSPTRG00000013852	URB1	99	40.097	ENSAMXG00000012306	urb1	99	40.167	Astyanax_mexicanus
ENSPTRG00000013852	URB1	99	77.729	ENSBTAG00000012412	URB1	99	77.817	Bos_taurus
ENSPTRG00000013852	URB1	100	92.747	ENSCJAG00000009118	URB1	100	92.703	Callithrix_jacchus
ENSPTRG00000013852	URB1	100	82.492	ENSCAFG00000008892	URB1	100	82.492	Canis_familiaris
ENSPTRG00000013852	URB1	100	81.442	ENSCAFG00020025994	-	100	81.442	Canis_lupus_dingo
ENSPTRG00000013852	URB1	100	82.498	ENSCAFG00020025987	-	100	82.498	Canis_lupus_dingo
ENSPTRG00000013852	URB1	99	77.071	ENSCHIG00000015645	URB1	99	77.159	Capra_hircus
ENSPTRG00000013852	URB1	100	86.790	ENSTSYG00000013286	URB1	99	86.790	Carlito_syrichta
ENSPTRG00000013852	URB1	98	79.847	ENSCAPG00000015589	URB1	99	79.847	Cavia_aperea
ENSPTRG00000013852	URB1	99	81.030	ENSCPOG00000006748	URB1	99	81.030	Cavia_porcellus
ENSPTRG00000013852	URB1	100	93.835	ENSCCAG00000021299	URB1	100	93.835	Cebus_capucinus
ENSPTRG00000013852	URB1	100	95.509	ENSCATG00000042630	URB1	100	95.509	Cercocebus_atys
ENSPTRG00000013852	URB1	100	81.231	ENSCLAG00000005262	URB1	100	81.231	Chinchilla_lanigera
ENSPTRG00000013852	URB1	100	93.862	ENSCSAG00000009584	URB1	100	93.862	Chlorocebus_sabaeus
ENSPTRG00000013852	URB1	99	59.335	ENSCPBG00000006454	URB1	99	59.284	Chrysemys_picta_bellii
ENSPTRG00000013852	URB1	100	95.729	ENSCANG00000031088	URB1	100	95.729	Colobus_angolensis_palliatus
ENSPTRG00000013852	URB1	99	77.441	ENSCGRG00001010616	Urb1	99	77.201	Cricetulus_griseus_chok1gshd
ENSPTRG00000013852	URB1	98	77.003	ENSCGRG00000015840	Urb1	99	77.003	Cricetulus_griseus_crigri
ENSPTRG00000013852	URB1	97	48.663	ENSCSEG00000012616	urb1	99	50.877	Cynoglossus_semilaevis
ENSPTRG00000013852	URB1	96	51.464	ENSCVAG00000009076	urb1	97	52.967	Cyprinodon_variegatus
ENSPTRG00000013852	URB1	99	43.058	ENSDARG00000060308	urb1	99	43.546	Danio_rerio
ENSPTRG00000013852	URB1	85	81.470	ENSDNOG00000015586	URB1	99	81.470	Dasypus_novemcinctus
ENSPTRG00000013852	URB1	100	81.294	ENSDORG00000006735	Urb1	100	81.294	Dipodomys_ordii
ENSPTRG00000013852	URB1	92	80.847	ENSETEG00000009080	URB1	92	80.847	Echinops_telfairi
ENSPTRG00000013852	URB1	100	82.306	ENSEASG00005007711	URB1	100	82.234	Equus_asinus_asinus
ENSPTRG00000013852	URB1	97	89.002	ENSECAG00000013206	URB1	100	88.826	Equus_caballus
ENSPTRG00000013852	URB1	58	85.417	ENSEEUG00000003626	-	57	85.417	Erinaceus_europaeus
ENSPTRG00000013852	URB1	99	44.799	ENSELUG00000020516	urb1	98	44.887	Esox_lucius
ENSPTRG00000013852	URB1	100	82.182	ENSFCAG00000002177	URB1	100	82.262	Felis_catus
ENSPTRG00000013852	URB1	98	51.570	ENSFALG00000004636	URB1	99	51.551	Ficedula_albicollis
ENSPTRG00000013852	URB1	100	81.212	ENSFDAG00000007288	URB1	95	81.212	Fukomys_damarensis
ENSPTRG00000013852	URB1	99	41.261	ENSFHEG00000000202	urb1	99	41.859	Fundulus_heteroclitus
ENSPTRG00000013852	URB1	93	47.350	ENSGMOG00000001838	urb1	94	47.268	Gadus_morhua
ENSPTRG00000013852	URB1	99	56.472	ENSGALG00000015887	URB1	99	56.495	Gallus_gallus
ENSPTRG00000013852	URB1	93	52.086	ENSGAFG00000020694	urb1	96	52.324	Gambusia_affinis
ENSPTRG00000013852	URB1	99	44.249	ENSGACG00000011703	urb1	99	44.249	Gasterosteus_aculeatus
ENSPTRG00000013852	URB1	99	58.610	ENSGAGG00000022544	URB1	99	58.559	Gopherus_agassizii
ENSPTRG00000013852	URB1	100	98.591	ENSGGOG00000000285	URB1	100	98.591	Gorilla_gorilla
ENSPTRG00000013852	URB1	99	45.057	ENSHBUG00000001904	urb1	99	44.890	Haplochromis_burtoni
ENSPTRG00000013852	URB1	99	79.757	ENSHGLG00000004907	URB1	99	79.757	Heterocephalus_glaber_female
ENSPTRG00000013852	URB1	99	80.501	ENSHGLG00100010749	URB1	99	80.501	Heterocephalus_glaber_male
ENSPTRG00000013852	URB1	74	47.647	ENSHCOG00000018683	urb1	97	48.039	Hippocampus_comes
ENSPTRG00000013852	URB1	99	40.841	ENSIPUG00000014721	urb1	99	40.929	Ictalurus_punctatus
ENSPTRG00000013852	URB1	100	83.692	ENSSTOG00000004539	URB1	100	83.692	Ictidomys_tridecemlineatus
ENSPTRG00000013852	URB1	99	45.195	ENSKMAG00000006001	urb1	99	47.286	Kryptolebias_marmoratus
ENSPTRG00000013852	URB1	94	51.053	ENSLBEG00000027208	urb1	98	51.609	Labrus_bergylta
ENSPTRG00000013852	URB1	99	48.398	ENSLACG00000017059	URB1	99	48.398	Latimeria_chalumnae
ENSPTRG00000013852	URB1	99	45.918	ENSLOCG00000009190	urb1	99	46.282	Lepisosteus_oculatus
ENSPTRG00000013852	URB1	99	79.123	ENSLAFG00000010407	URB1	100	79.123	Loxodonta_africana
ENSPTRG00000013852	URB1	100	95.641	ENSMFAG00000034391	URB1	97	95.641	Macaca_fascicularis
ENSPTRG00000013852	URB1	100	95.553	ENSMMUG00000010295	URB1	100	95.553	Macaca_mulatta
ENSPTRG00000013852	URB1	100	94.188	ENSMNEG00000032981	URB1	100	94.188	Macaca_nemestrina
ENSPTRG00000013852	URB1	100	95.949	ENSMLEG00000041435	URB1	100	95.949	Mandrillus_leucophaeus
ENSPTRG00000013852	URB1	99	42.995	ENSMAMG00000011238	urb1	99	42.989	Mastacembelus_armatus
ENSPTRG00000013852	URB1	99	40.324	ENSMZEG00005011862	urb1	99	41.828	Maylandia_zebra
ENSPTRG00000013852	URB1	98	57.143	ENSMGAG00000014512	URB1	99	57.143	Meleagris_gallopavo
ENSPTRG00000013852	URB1	94	80.730	ENSMAUG00000010516	Urb1	99	80.707	Mesocricetus_auratus
ENSPTRG00000013852	URB1	99	86.173	ENSMICG00000016424	URB1	99	86.173	Microcebus_murinus
ENSPTRG00000013852	URB1	99	75.595	ENSMOCG00000012613	Urb1	99	75.517	Microtus_ochrogaster
ENSPTRG00000013852	URB1	99	64.899	ENSMODG00000021076	URB1	100	64.899	Monodelphis_domestica
ENSPTRG00000013852	URB1	94	52.169	ENSMALG00000017411	urb1	97	52.587	Monopterus_albus
ENSPTRG00000013852	URB1	99	76.067	MGP_CAROLIEiJ_G0020948	Urb1	99	76.067	Mus_caroli
ENSPTRG00000013852	URB1	99	76.595	ENSMUSG00000039929	Urb1	99	76.595	Mus_musculus
ENSPTRG00000013852	URB1	99	76.595	MGP_PahariEiJ_G0016653	Urb1	99	76.639	Mus_pahari
ENSPTRG00000013852	URB1	99	76.276	MGP_SPRETEiJ_G0021854	Urb1	99	76.276	Mus_spretus
ENSPTRG00000013852	URB1	100	80.370	ENSMPUG00000001123	URB1	100	80.370	Mustela_putorius_furo
ENSPTRG00000013852	URB1	99	77.851	ENSNGAG00000001905	Urb1	99	77.851	Nannospalax_galili
ENSPTRG00000013852	URB1	82	45.805	ENSNBRG00000001049	urb1	99	46.089	Neolamprologus_brichardi
ENSPTRG00000013852	URB1	100	95.024	ENSNLEG00000026872	URB1	100	95.024	Nomascus_leucogenys
ENSPTRG00000013852	URB1	93	67.176	ENSMEUG00000010828	URB1	96	60.026	Notamacropus_eugenii
ENSPTRG00000013852	URB1	99	74.956	ENSOPRG00000013482	URB1	100	74.956	Ochotona_princeps
ENSPTRG00000013852	URB1	100	79.780	ENSODEG00000002587	URB1	99	79.780	Octodon_degus
ENSPTRG00000013852	URB1	99	45.225	ENSONIG00000005599	urb1	99	45.399	Oreochromis_niloticus
ENSPTRG00000013852	URB1	99	81.129	ENSOCUG00000009381	URB1	99	81.129	Oryctolagus_cuniculus
ENSPTRG00000013852	URB1	99	43.395	ENSORLG00000003429	urb1	99	43.474	Oryzias_latipes
ENSPTRG00000013852	URB1	99	43.207	ENSORLG00020013785	urb1	99	43.285	Oryzias_latipes_hni
ENSPTRG00000013852	URB1	99	42.483	ENSORLG00015019421	urb1	97	46.466	Oryzias_latipes_hsok
ENSPTRG00000013852	URB1	77	50.468	ENSOMEG00000002094	urb1	98	50.468	Oryzias_melastigma
ENSPTRG00000013852	URB1	99	85.507	ENSOGAG00000017140	URB1	100	85.507	Otolemur_garnettii
ENSPTRG00000013852	URB1	97	77.929	ENSOARG00000013679	URB1	99	77.844	Ovis_aries
ENSPTRG00000013852	URB1	100	99.868	ENSPPAG00000003423	URB1	100	99.868	Pan_paniscus
ENSPTRG00000013852	URB1	100	82.306	ENSPPRG00000023131	URB1	100	82.306	Panthera_pardus
ENSPTRG00000013852	URB1	92	80.384	ENSPTIG00000016125	URB1	98	80.384	Panthera_tigris_altaica
ENSPTRG00000013852	URB1	100	95.993	ENSPANG00000021964	URB1	100	95.993	Papio_anubis
ENSPTRG00000013852	URB1	99	45.410	ENSPKIG00000003683	urb1	98	45.727	Paramormyrops_kingsleyae
ENSPTRG00000013852	URB1	99	77.126	ENSPEMG00000021205	Urb1	99	77.126	Peromyscus_maniculatus_bairdii
ENSPTRG00000013852	URB1	75	35.953	ENSPMAG00000009733	URB1	100	34.122	Petromyzon_marinus
ENSPTRG00000013852	URB1	99	64.520	ENSPCIG00000016350	URB1	100	64.433	Phascolarctos_cinereus
ENSPTRG00000013852	URB1	96	42.746	ENSPLAG00000004371	urb1	99	42.746	Poecilia_latipinna
ENSPTRG00000013852	URB1	98	43.461	ENSPMEG00000006634	urb1	98	43.521	Poecilia_mexicana
ENSPTRG00000013852	URB1	98	43.658	ENSPREG00000013453	urb1	98	43.764	Poecilia_reticulata
ENSPTRG00000013852	URB1	100	96.786	ENSPPYG00000011359	URB1	100	96.786	Pongo_abelii
ENSPTRG00000013852	URB1	99	68.094	ENSPCAG00000007430	URB1	99	68.094	Procavia_capensis
ENSPTRG00000013852	URB1	100	87.230	ENSPCOG00000022695	URB1	100	87.230	Propithecus_coquereli
ENSPTRG00000013852	URB1	100	80.546	ENSPVAG00000000889	URB1	100	80.546	Pteropus_vampyrus
ENSPTRG00000013852	URB1	99	43.471	ENSPNYG00000010589	urb1	99	43.305	Pundamilia_nyererei
ENSPTRG00000013852	URB1	99	40.545	ENSPNAG00000019324	urb1	99	40.413	Pygocentrus_nattereri
ENSPTRG00000013852	URB1	99	76.253	ENSRNOG00000002080	Urb1	99	76.341	Rattus_norvegicus
ENSPTRG00000013852	URB1	100	95.024	ENSRBIG00000033122	URB1	100	95.024	Rhinopithecus_bieti
ENSPTRG00000013852	URB1	100	95.156	ENSRROG00000040237	URB1	100	95.156	Rhinopithecus_roxellana
ENSPTRG00000013852	URB1	100	92.914	ENSSBOG00000027672	URB1	100	92.914	Saimiri_boliviensis_boliviensis
ENSPTRG00000013852	URB1	99	63.991	ENSSHAG00000005140	URB1	100	63.986	Sarcophilus_harrisii
ENSPTRG00000013852	URB1	93	46.201	ENSSFOG00015000339	urb1	99	46.082	Scleropages_formosus
ENSPTRG00000013852	URB1	98	44.116	ENSSMAG00000003782	urb1	99	43.967	Scophthalmus_maximus
ENSPTRG00000013852	URB1	99	44.739	ENSSDUG00000012313	urb1	99	44.868	Seriola_dumerili
ENSPTRG00000013852	URB1	99	44.700	ENSSLDG00000023179	urb1	99	44.570	Seriola_lalandi_dorsalis
ENSPTRG00000013852	URB1	99	55.096	ENSSPUG00000012447	URB1	99	55.279	Sphenodon_punctatus
ENSPTRG00000013852	URB1	99	44.136	ENSSPAG00000006325	urb1	99	44.430	Stegastes_partitus
ENSPTRG00000013852	URB1	100	79.604	ENSSSCG00000032024	URB1	100	79.604	Sus_scrofa
ENSPTRG00000013852	URB1	73	58.254	ENSTGUG00000013442	URB1	100	57.920	Taeniopygia_guttata
ENSPTRG00000013852	URB1	99	44.119	ENSTRUG00000009372	urb1	99	44.184	Takifugu_rubripes
ENSPTRG00000013852	URB1	99	43.065	ENSTNIG00000016277	urb1	100	43.015	Tetraodon_nigroviridis
ENSPTRG00000013852	URB1	81	86.087	ENSTBEG00000010044	URB1	81	86.087	Tupaia_belangeri
ENSPTRG00000013852	URB1	91	79.289	ENSTTRG00000007712	URB1	92	79.498	Tursiops_truncatus
ENSPTRG00000013852	URB1	100	82.042	ENSUAMG00000012231	URB1	99	82.042	Ursus_americanus
ENSPTRG00000013852	URB1	95	82.115	ENSUMAG00000017419	URB1	98	83.325	Ursus_maritimus
ENSPTRG00000013852	URB1	68	88.889	ENSVPAG00000001164	URB1	68	88.889	Vicugna_pacos
ENSPTRG00000013852	URB1	100	82.293	ENSVVUG00000000551	URB1	100	82.293	Vulpes_vulpes
ENSPTRG00000013852	URB1	99	49.935	ENSXETG00000009895	urb1	99	50.371	Xenopus_tropicalis
ENSPTRG00000013852	URB1	99	40.811	ENSXCOG00000005500	urb1	99	40.859	Xiphophorus_couchianus
ENSPTRG00000013852	URB1	99	40.847	ENSXMAG00000007253	urb1	99	40.895	Xiphophorus_maculatus